RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 IL34Q6ZMJ4 242 aa5.46□□□□□ -1.54
USP46-208ENST00000512656 Q6ZS49 121 aa5.46□□□□□ -1.54
USP46-208ENST00000512656 SLC25A42Q86VD7 318 aa5.46□□□□□ -1.54
USP46-208ENST00000512656 LAX1Q8IWV1 398 aa5.46□□□□□ -1.54
USP46-208ENST00000512656 MMD2Q8IY49 270 aa5.46□□□□□ -1.54
USP46-208ENST00000512656 ADAD2Q8NCV1 583 aaKnown RBP5.46□□□□□ -1.54
USP46-208ENST00000512656 SRSF12Q8WXF0 261 aaKnown RBP5.46□□□□□ -1.54
USP46-208ENST00000512656 ACOT12Q8WYK0 555 aa5.46□□□□□ -1.54
USP46-208ENST00000512656 DCUN1D5Q9BTE7 237 aa5.46□□□□□ -1.54
USP46-208ENST00000512656 VCX3BQ9H321 246 aa5.46□□□□□ -1.54
USP46-208ENST00000512656 EDA2RQ9HAV5 297 aa5.46□□□□□ -1.54
USP46-208ENST00000512656 SLC2A8Q9NY64 477 aa5.46□□□□□ -1.54
USP46-208ENST00000512656 BLOC1S6Q9UL45 172 aa5.46□□□□□ -1.54
USP46-208ENST00000512656 MRPS7Q9Y2R9 242 aaKnown RBP5.46□□□□□ -1.54
USP46-208ENST00000512656 KCNK7Q9Y2U2 307 aa5.46□□□□□ -1.54
USP46-208ENST00000512656 PRELID3BQ9Y3B1 194 aa5.46□□□□□ -1.54
USP46-208ENST00000512656 DNAH1Q9P2D7 4330 aa5.45□□□□□ -1.54
USP46-208ENST00000512656 SRRM4A7MD48 611 aaKnown RBP5.45□□□□□ -1.54
USP46-208ENST00000512656 RAB27BO00194 218 aa5.45□□□□□ -1.54
USP46-208ENST00000512656 MFNGO00587 321 aa5.45□□□□□ -1.54
USP46-208ENST00000512656 TPPPO94811 219 aa5.45□□□□□ -1.54
USP46-208ENST00000512656 TRBV12-3P01733 135 aa5.45□□□□□ -1.54
USP46-208ENST00000512656 CSN3P07498 182 aa5.45□□□□□ -1.54
USP46-208ENST00000512656 APELAP0DMC3 54 aa5.45□□□□□ -1.54
USP46-208ENST00000512656 CD36P16671 472 aa5.45□□□□□ -1.54
USP46-208ENST00000512656 DTYMKP23919 212 aa5.45□□□□□ -1.54
USP46-208ENST00000512656 CRHBPP24387 322 aa5.45□□□□□ -1.54
USP46-208ENST00000512656 MAP2K4P45985 399 aa5.45□□□□□ -1.54
USP46-208ENST00000512656 HSPA13P48723 471 aa5.45□□□□□ -1.54
USP46-208ENST00000512656 AQP4P55087 323 aa5.45□□□□□ -1.54
USP46-208ENST00000512656 EXOSC2Q13868 293 aaKnown RBP5.45□□□□□ -1.54
USP46-208ENST00000512656 CDK10Q15131 360 aa5.45□□□□□ -1.54
USP46-208ENST00000512656 TBCEQ15813 527 aaPredicted RBP5.45□□□□□ -1.54
USP46-208ENST00000512656 ZNF367Q7RTV3 350 aa5.45□□□□□ -1.54
USP46-208ENST00000512656 H1FOOQ8IZA3 346 aaPredicted RBP5.45□□□□□ -1.54
USP46-208ENST00000512656 ZNF645Q8N7E2 425 aa5.45□□□□□ -1.54
USP46-208ENST00000512656 NECAP1Q8NC96 275 aa5.45□□□□□ -1.54
USP46-208ENST00000512656 AKIP1Q9NQ31 210 aa5.45□□□□□ -1.54
USP46-208ENST00000512656 ZNF230Q9UIE0 474 aaPredicted RBP5.45□□□□□ -1.54
USP46-208ENST00000512656 SACSQ9NZJ4 4579 aa5.45□□□□□ -1.54
USP46-208ENST00000512656 TRBV9A0A0B4J1U6 114 aa5.44□□□□□ -1.54
USP46-208ENST00000512656 DPPA5A6NC42 116 aa5.44□□□□□ -1.54
USP46-208ENST00000512656 BMPR1BO00238 502 aa5.44□□□□□ -1.54
USP46-208ENST00000512656 FCGR3BO75015 233 aa5.44□□□□□ -1.54
USP46-208ENST00000512656 SCGNO76038 276 aa5.44□□□□□ -1.54
USP46-208ENST00000512656 JTBO76095 146 aa5.44□□□□□ -1.54
USP46-208ENST00000512656 DHFRP00374 187 aa5.44□□□□□ -1.54
USP46-208ENST00000512656 SAA1P0DJI8 122 aaPredicted RBP5.44□□□□□ -1.54
USP46-208ENST00000512656 RAB3BP20337 219 aa5.44□□□□□ -1.54
USP46-208ENST00000512656 GALP22466 123 aa5.44□□□□□ -1.54
USP46-208ENST00000512656 CD81P60033 236 aa5.44□□□□□ -1.54
USP46-208ENST00000512656 DEFA5Q01523 94 aa5.44□□□□□ -1.54
USP46-208ENST00000512656 CDNFQ49AH0 187 aa5.44□□□□□ -1.54
USP46-208ENST00000512656 IDO2Q6ZQW0 420 aa5.44□□□□□ -1.54
USP46-208ENST00000512656 KCTD9Q7L273 389 aa5.44□□□□□ -1.54
USP46-208ENST00000512656 TTC9CQ8N5M4 171 aa5.44□□□□□ -1.54
USP46-208ENST00000512656 VSTM2AQ8TAG5 236 aa5.44□□□□□ -1.54
USP46-208ENST00000512656 DYNLRB2Q8TF09 96 aa5.44□□□□□ -1.54
USP46-208ENST00000512656 MAFIPQ8WZ33 124 aa5.44□□□□□ -1.54
USP46-208ENST00000512656 DDB2Q92466 427 aa5.44□□□□□ -1.54
USP46-208ENST00000512656 C5orf30Q96GV9 206 aa5.44□□□□□ -1.54
USP46-208ENST00000512656 AIFM2Q9BRQ8 373 aa5.44□□□□□ -1.54
USP46-208ENST00000512656 THAP7Q9BT49 309 aaPredicted RBP5.44□□□□□ -1.54
USP46-208ENST00000512656 ATG5Q9H1Y0 275 aa5.44□□□□□ -1.54
USP46-208ENST00000512656 DCSTAMPQ9H295 470 aa5.44□□□□□ -1.54
USP46-208ENST00000512656 ZNF430Q9H8G1 570 aaPredicted RBP5.44□□□□□ -1.54
USP46-208ENST00000512656 TECRQ9NZ01 308 aaKnown RBP5.44□□□□□ -1.54
USP46-208ENST00000512656 ZNF257Q9Y2Q1 563 aa5.44□□□□□ -1.54
USP46-208ENST00000512656 OR2W1Q9Y3N9 320 aa5.44□□□□□ -1.54
USP46-208ENST00000512656 CEPT1Q9Y6K0 416 aa5.44□□□□□ -1.54
USP46-208ENST00000512656 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.43□□□□□ -1.54
USP46-208ENST00000512656 TRDV1A0A1B0GX56 115 aa5.43□□□□□ -1.54
USP46-208ENST00000512656 IZUMO1RA6ND01 250 aa5.43□□□□□ -1.54
USP46-208ENST00000512656 LINC00473A8K010 186 aa5.43□□□□□ -1.54
USP46-208ENST00000512656 GGCTO75223 188 aaKnown RBP5.43□□□□□ -1.54
USP46-208ENST00000512656 HRASP01112 189 aa5.43□□□□□ -1.54
USP46-208ENST00000512656 HLA-DQB1P01920 261 aa5.43□□□□□ -1.54
USP46-208ENST00000512656 MAS1LP35410 378 aa5.43□□□□□ -1.54
USP46-208ENST00000512656 OR10A3P58181 314 aa5.43□□□□□ -1.54
USP46-208ENST00000512656 PLA2G7Q13093 441 aa5.43□□□□□ -1.54
USP46-208ENST00000512656 MRGPRG-AS1Q2M3A8 158 aa5.43□□□□□ -1.54
USP46-208ENST00000512656 C15orf32Q32M92 178 aa5.43□□□□□ -1.54
USP46-208ENST00000512656 CD300EQ496F6 205 aaPredicted RBP5.43□□□□□ -1.54
USP46-208ENST00000512656 FAM106AQ4KMX7 169 aa5.43□□□□□ -1.54
USP46-208ENST00000512656 HACD4Q5VWC8 232 aa5.43□□□□□ -1.54
USP46-208ENST00000512656 CNIH2Q6PI25 160 aa5.43□□□□□ -1.54
USP46-208ENST00000512656 SLC16A13Q7RTY0 426 aa5.43□□□□□ -1.54
USP46-208ENST00000512656 OR4S2Q8NH73 311 aa5.43□□□□□ -1.54
USP46-208ENST00000512656 OR2A7Q96R45 310 aa5.43□□□□□ -1.54
USP46-208ENST00000512656 GPHA2Q96T91 129 aa5.43□□□□□ -1.54
USP46-208ENST00000512656 HSD17B10Q99714 261 aaKnown RBP5.43□□□□□ -1.54
USP46-208ENST00000512656 NEURL2Q9BR09 285 aa5.43□□□□□ -1.54
USP46-208ENST00000512656 ST6GALNAC5Q9BVH7 336 aa5.43□□□□□ -1.54
USP46-208ENST00000512656 OR51E2Q9H255 320 aa5.43□□□□□ -1.54
USP46-208ENST00000512656 NDUFB11Q9NX14 153 aa5.43□□□□□ -1.54
USP46-208ENST00000512656 NKX1-2Q9UD57 310 aaPredicted RBP5.43□□□□□ -1.54
USP46-208ENST00000512656 RBMX2Q9Y388 322 aaKnown RBP5.43□□□□□ -1.54
USP46-208ENST00000512656 STARD9Q9P2P6 4700 aa5.42□□□□□ -1.54
USP46-208ENST00000512656 ZNF785A8K8V0 405 aa5.42□□□□□ -1.54
USP46-208ENST00000512656 NPIPB5A8MRT5 1133 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms