RNA–Protein interactions for RNA: ENST00000512632.5

LIMCH1-215, Transcript of LIM and calponin homology domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMCH1, Length 4,792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-215ENST00000512632 RPL15P61313 204 aaKnown RBP7.67□□□□□ -1.18
LIMCH1-215ENST00000512632 OR2Z1Q8NG97 314 aa7.67□□□□□ -1.18
LIMCH1-215ENST00000512632 NOL4LQ96MY1 436 aaPredicted RBP7.67□□□□□ -1.18
LIMCH1-215ENST00000512632 MGST2Q99735 147 aa7.67□□□□□ -1.18
LIMCH1-215ENST00000512632 ZDHHC11Q9H8X9 412 aa7.67□□□□□ -1.18
LIMCH1-215ENST00000512632 SPINK4O60575 86 aa7.67□□□□□ -1.18
LIMCH1-215ENST00000512632 FRMD6-AS1P0C7T7 363 aa7.67□□□□□ -1.18
LIMCH1-215ENST00000512632 MYOD1P15172 320 aa7.67□□□□□ -1.18
LIMCH1-215ENST00000512632 IQCJQ1A5X6 159 aa7.67□□□□□ -1.18
LIMCH1-215ENST00000512632 FAM214BQ7L5A3 538 aa7.67□□□□□ -1.18
LIMCH1-215ENST00000512632 GGTLC1Q9BX51 225 aa7.67□□□□□ -1.18
LIMCH1-215ENST00000512632 SEPSECSQ9HD40 501 aaKnown RBP7.67□□□□□ -1.18
LIMCH1-215ENST00000512632 TNRC18O15417 2968 aaPredicted RBP7.67□□□□□ -1.18
LIMCH1-215ENST00000512632 ACTL6BO94805 426 aa7.67□□□□□ -1.18
LIMCH1-215ENST00000512632 CECR9P0C854 216 aa7.67□□□□□ -1.18
LIMCH1-215ENST00000512632 ADMP35318 185 aa7.67□□□□□ -1.18
LIMCH1-215ENST00000512632 ZNF134P52741 427 aa7.67□□□□□ -1.18
LIMCH1-215ENST00000512632 LCN2P80188 198 aa7.67□□□□□ -1.18
LIMCH1-215ENST00000512632 SMIM21Q3B7S5 101 aa7.67□□□□□ -1.18
LIMCH1-215ENST00000512632 INO80CQ6PI98 192 aaPredicted RBP7.67□□□□□ -1.18
LIMCH1-215ENST00000512632 OR10G8Q8NGN5 311 aa7.67□□□□□ -1.18
LIMCH1-215ENST00000512632 C2orf88Q9BSF0 95 aa7.67□□□□□ -1.18
LIMCH1-215ENST00000512632 IER2Q9BTL4 223 aa7.67□□□□□ -1.18
LIMCH1-215ENST00000512632 ELOVL5Q9NYP7 299 aa7.67□□□□□ -1.18
LIMCH1-215ENST00000512632 C15orf65H3BRN8 121 aa7.67□□□□□ -1.18
LIMCH1-215ENST00000512632 FOXH1O75593 365 aa7.67□□□□□ -1.18
LIMCH1-215ENST00000512632 PAX1P15863 534 aa7.67□□□□□ -1.18
LIMCH1-215ENST00000512632 SPCS3P61009 180 aa7.67□□□□□ -1.18
LIMCH1-215ENST00000512632 ZNF90Q03938 601 aa7.67□□□□□ -1.18
LIMCH1-215ENST00000512632 FAM201AQ5SY85 155 aa7.67□□□□□ -1.18
LIMCH1-215ENST00000512632 KCNIP2Q9NS61 270 aa7.67□□□□□ -1.18
LIMCH1-215ENST00000512632 INTS1Q8N201 2190 aaKnown RBP7.66□□□□□ -1.18
LIMCH1-215ENST00000512632 J3QW42 95 aa7.66□□□□□ -1.18
LIMCH1-215ENST00000512632 CCKARP32238 428 aa7.66□□□□□ -1.18
LIMCH1-215ENST00000512632 ERVK-16P61578 105 aa7.66□□□□□ -1.18
LIMCH1-215ENST00000512632 RPL31P62899 125 aaKnown RBP7.66□□□□□ -1.18
LIMCH1-215ENST00000512632 HLA-DRB5Q30154 266 aa7.66□□□□□ -1.18
LIMCH1-215ENST00000512632 MORN2Q502X0 79 aa7.66□□□□□ -1.18
LIMCH1-215ENST00000512632 TMEM144Q7Z5S9 345 aa7.66□□□□□ -1.18
LIMCH1-215ENST00000512632 YTHDF2Q9Y5A9 579 aaKnown RBP7.66□□□□□ -1.18
LIMCH1-215ENST00000512632 HCFC1P51610 2035 aa7.66□□□□□ -1.18
LIMCH1-215ENST00000512632 TCAPO15273 167 aa7.66□□□□□ -1.18
LIMCH1-215ENST00000512632 GFRA3O60609 400 aa7.66□□□□□ -1.18
LIMCH1-215ENST00000512632 HPRT1P00492 218 aa7.66□□□□□ -1.18
LIMCH1-215ENST00000512632 Q6ZT83 130 aa7.66□□□□□ -1.18
LIMCH1-215ENST00000512632 WDR31Q8NA23 367 aa7.66□□□□□ -1.18
LIMCH1-215ENST00000512632 S1PR3Q99500 378 aa7.66□□□□□ -1.18
LIMCH1-215ENST00000512632 TCF19Q9Y242 345 aa7.66□□□□□ -1.18
LIMCH1-215ENST00000512632 CACNA1HO95180 2353 aa7.66□□□□□ -1.18
LIMCH1-215ENST00000512632 PLCE1Q9P212 2302 aa7.66□□□□□ -1.18
LIMCH1-215ENST00000512632 TMPRSS2O15393 492 aa7.66□□□□□ -1.18
LIMCH1-215ENST00000512632 STAG3L2P0CL84 134 aa7.66□□□□□ -1.18
LIMCH1-215ENST00000512632 STAG3L3P0CL85 134 aa7.66□□□□□ -1.18
LIMCH1-215ENST00000512632 G0S2P27469 103 aa7.66□□□□□ -1.18
LIMCH1-215ENST00000512632 RPL29P47914 159 aaKnown RBP7.66□□□□□ -1.18
LIMCH1-215ENST00000512632 CCL11P51671 97 aa7.66□□□□□ -1.18
LIMCH1-215ENST00000512632 ZNF718Q3SXZ3 478 aa7.66□□□□□ -1.18
LIMCH1-215ENST00000512632 VHLLQ6RSH7 139 aa7.66□□□□□ -1.18
LIMCH1-215ENST00000512632 TCTEX1D1Q8N7M0 179 aa7.66□□□□□ -1.18
LIMCH1-215ENST00000512632 FAM122AQ96E09 287 aa7.66□□□□□ -1.18
LIMCH1-215ENST00000512632 TBX15Q96SF7 602 aa7.66□□□□□ -1.18
LIMCH1-215ENST00000512632 TMEM140Q9NV12 185 aa7.66□□□□□ -1.18
LIMCH1-215ENST00000512632 ARFGEF3Q5TH69 2177 aa7.66□□□□□ -1.18
LIMCH1-215ENST00000512632 C1orf229Q6ZS94 237 aaPredicted RBP7.66□□□□□ -1.18
LIMCH1-215ENST00000512632 OR4P4Q8NGL7 312 aa7.66□□□□□ -1.18
LIMCH1-215ENST00000512632 DIRC2Q96SL1 478 aa7.66□□□□□ -1.18
LIMCH1-215ENST00000512632 SNHG12Q9BXW3 62 aa7.66□□□□□ -1.18
LIMCH1-215ENST00000512632 ADH4P08319 380 aa7.65□□□□□ -1.18
LIMCH1-215ENST00000512632 VDAC2P45880 294 aaPredicted RBP7.65□□□□□ -1.18
LIMCH1-215ENST00000512632 FOXL1Q12952 345 aa7.65□□□□□ -1.18
LIMCH1-215ENST00000512632 SRSF6Q13247 344 aaKnown RBP7.65□□□□□ -1.18
LIMCH1-215ENST00000512632 OR5I1Q13606 314 aa7.65□□□□□ -1.18
LIMCH1-215ENST00000512632 TDRG1Q3Y452 100 aa7.65□□□□□ -1.18
LIMCH1-215ENST00000512632 SPRNQ5BIV9 151 aa7.65□□□□□ -1.18
LIMCH1-215ENST00000512632 DBX2Q6ZNG2 339 aa7.65□□□□□ -1.18
LIMCH1-215ENST00000512632 TMEM178AQ8NBL3 297 aa7.65□□□□□ -1.18
LIMCH1-215ENST00000512632 TIMP3P35625 211 aa7.65□□□□□ -1.18
LIMCH1-215ENST00000512632 OPRK1P41145 380 aa7.65□□□□□ -1.18
LIMCH1-215ENST00000512632 KIR2DL2P43627 348 aaPredicted RBP7.65□□□□□ -1.18
LIMCH1-215ENST00000512632 C9orf106Q8NAJ2 232 aa7.65□□□□□ -1.18
LIMCH1-215ENST00000512632 PRR7Q8TB68 274 aa7.65□□□□□ -1.18
LIMCH1-215ENST00000512632 NAGKQ9UJ70 344 aa7.65□□□□□ -1.18
LIMCH1-215ENST00000512632 TP53TG5Q9Y2B4 290 aa7.65□□□□□ -1.18
LIMCH1-215ENST00000512632 POLR3KQ9Y2Y1 108 aaPredicted RBP7.65□□□□□ -1.18
LIMCH1-215ENST00000512632 ABCA1O95477 2261 aa7.65□□□□□ -1.18
LIMCH1-215ENST00000512632 KMT2EQ8IZD2 1858 aa7.65□□□□□ -1.18
LIMCH1-215ENST00000512632 BOD1L1Q8NFC6 3051 aa7.65□□□□□ -1.19
LIMCH1-215ENST00000512632 IGKV1D-17A0A075B6S4 117 aa7.65□□□□□ -1.19
LIMCH1-215ENST00000512632 CXorf1O96002 111 aa7.65□□□□□ -1.19
LIMCH1-215ENST00000512632 IL6RP08887 468 aaPredicted RBP7.65□□□□□ -1.19
LIMCH1-215ENST00000512632 SLC35B1P78383 322 aa7.65□□□□□ -1.19
LIMCH1-215ENST00000512632 RELBQ01201 579 aa7.65□□□□□ -1.19
LIMCH1-215ENST00000512632 GCHFRP30047 84 aa7.64□□□□□ -1.19
LIMCH1-215ENST00000512632 RPP30P78346 268 aaKnown RBP7.64□□□□□ -1.19
LIMCH1-215ENST00000512632 HES3Q5TGS1 186 aa7.64□□□□□ -1.19
LIMCH1-215ENST00000512632 ZNF705AQ6ZN79 300 aaPredicted RBP7.64□□□□□ -1.19
LIMCH1-215ENST00000512632 MOB3BQ86TA1 216 aa7.64□□□□□ -1.19
LIMCH1-215ENST00000512632 BEND2Q8NDZ0 799 aa7.64□□□□□ -1.19
LIMCH1-215ENST00000512632 DEFB108BQ8NET1 73 aa7.64□□□□□ -1.19
LIMCH1-215ENST00000512632 CMTM2Q8TAZ6 248 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms