RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 RAB24Q969Q5 203 aa10.99□□□□□ -0.65
PCDHA4-202ENST00000512229 MSRB2Q9Y3D2 182 aa10.99□□□□□ -0.65
PCDHA4-202ENST00000512229 TRBV23-1A0A0A0MS06 115 aa10.99□□□□□ -0.65
PCDHA4-202ENST00000512229 YPEL1O60688 119 aa10.99□□□□□ -0.65
PCDHA4-202ENST00000512229 ATP5J2P56134 94 aa10.99□□□□□ -0.65
PCDHA4-202ENST00000512229 MIC13Q5XKP0 118 aa10.99□□□□□ -0.65
PCDHA4-202ENST00000512229 SPNS3Q6ZMD2 512 aa10.99□□□□□ -0.65
PCDHA4-202ENST00000512229 NEU4Q8WWR8 484 aaPredicted RBP10.99□□□□□ -0.65
PCDHA4-202ENST00000512229 YPEL2Q96QA6 119 aa10.99□□□□□ -0.65
PCDHA4-202ENST00000512229 IGKV3-15P01624 115 aa10.99□□□□□ -0.65
PCDHA4-202ENST00000512229 FAM106CPP0CH98 169 aa10.99□□□□□ -0.65
PCDHA4-202ENST00000512229 COX6B1P14854 86 aa10.99□□□□□ -0.65
PCDHA4-202ENST00000512229 GUCA2BQ16661 112 aa10.99□□□□□ -0.65
PCDHA4-202ENST00000512229 ZNF474Q6S9Z5 364 aaPredicted RBP10.99□□□□□ -0.65
PCDHA4-202ENST00000512229 OSR1Q8TAX0 266 aaPredicted RBP10.99□□□□□ -0.65
PCDHA4-202ENST00000512229 FREM1Q5H8C1 2179 aa10.99□□□□□ -0.65
PCDHA4-202ENST00000512229 CTRB1P17538 263 aa10.98□□□□□ -0.65
PCDHA4-202ENST00000512229 SUMO1P63165 101 aaKnown RBP10.98□□□□□ -0.65
PCDHA4-202ENST00000512229 MEF2BQ02080 365 aaPredicted RBP10.98□□□□□ -0.65
PCDHA4-202ENST00000512229 CTRB2Q6GPI1 263 aa10.98□□□□□ -0.65
PCDHA4-202ENST00000512229 RTN4RL2Q86UN3 420 aa10.98□□□□□ -0.65
PCDHA4-202ENST00000512229 TLNRD1Q9H1K6 362 aa10.98□□□□□ -0.65
PCDHA4-202ENST00000512229 C20orf202A1L168 122 aa10.98□□□□□ -0.65
PCDHA4-202ENST00000512229 DBX1A6NMT0 343 aa10.98□□□□□ -0.65
PCDHA4-202ENST00000512229 DKK1O94907 266 aa10.98□□□□□ -0.65
PCDHA4-202ENST00000512229 S100A8P05109 93 aa10.98□□□□□ -0.65
PCDHA4-202ENST00000512229 LINC00869P0C866 280 aa10.98□□□□□ -0.65
PCDHA4-202ENST00000512229 CCL3L1P16619 93 aa10.98□□□□□ -0.65
PCDHA4-202ENST00000512229 SUPT4H1P63272 117 aaKnown RBP10.98□□□□□ -0.65
PCDHA4-202ENST00000512229 SRSF7Q16629 238 aaKnown RBP eCLIP10.98□□□□□ -0.65
PCDHA4-202ENST00000512229 ECSCRQ19T08 205 aa10.98□□□□□ -0.65
PCDHA4-202ENST00000512229 OR10G8Q8NGN5 311 aa10.98□□□□□ -0.65
PCDHA4-202ENST00000512229 RPRMQ9NS64 109 aa10.98□□□□□ -0.65
PCDHA4-202ENST00000512229 NOTCH2Q04721 2471 aa10.98□□□□□ -0.65
PCDHA4-202ENST00000512229 RSPO1Q2MKA7 263 aaPredicted RBP10.98□□□□□ -0.65
PCDHA4-202ENST00000512229 WDFY1Q8IWB7 410 aa10.98□□□□□ -0.65
PCDHA4-202ENST00000512229 PUSL1Q8N0Z8 303 aaKnown RBP10.98□□□□□ -0.65
PCDHA4-202ENST00000512229 OR2T10Q8NGZ9 312 aa10.98□□□□□ -0.65
PCDHA4-202ENST00000512229 FAM216AQ8WUB2 273 aa10.98□□□□□ -0.65
PCDHA4-202ENST00000512229 A0A0G2JNJ9 132 aa10.98□□□□□ -0.65
PCDHA4-202ENST00000512229 HELTA6NFD8 242 aa10.98□□□□□ -0.65
PCDHA4-202ENST00000512229 SIGLEC5O15389 551 aa10.98□□□□□ -0.65
PCDHA4-202ENST00000512229 GATCO43716 136 aaKnown RBP10.98□□□□□ -0.65
PCDHA4-202ENST00000512229 SPINK4O60575 86 aa10.98□□□□□ -0.65
PCDHA4-202ENST00000512229 HYPMO75409 117 aa10.98□□□□□ -0.65
PCDHA4-202ENST00000512229 NBL1P41271 181 aa10.98□□□□□ -0.65
PCDHA4-202ENST00000512229 MORN2Q502X0 79 aa10.98□□□□□ -0.65
PCDHA4-202ENST00000512229 ZNF324BQ6AW86 544 aaPredicted RBP10.98□□□□□ -0.65
PCDHA4-202ENST00000512229 IGFL3Q6UXB1 125 aa10.98□□□□□ -0.65
PCDHA4-202ENST00000512229 WDR31Q8NA23 367 aa10.98□□□□□ -0.65
PCDHA4-202ENST00000512229 Q9UFV3 132 aa10.98□□□□□ -0.65
PCDHA4-202ENST00000512229 NTF3P20783 257 aa10.97□□□□□ -0.65
PCDHA4-202ENST00000512229 RND2P52198 227 aa10.97□□□□□ -0.65
PCDHA4-202ENST00000512229 ASCL4Q6XD76 172 aa10.97□□□□□ -0.65
PCDHA4-202ENST00000512229 DNM1P46Q6ZS02 220 aa10.97□□□□□ -0.65
PCDHA4-202ENST00000512229 ANKHD1Q8IWZ3 2542 aaKnown RBP10.97□□□□□ -0.65
PCDHA4-202ENST00000512229 HSPB1P04792 205 aaKnown RBP10.97□□□□□ -0.65
PCDHA4-202ENST00000512229 COMPP49747 757 aaPredicted RBP10.97□□□□□ -0.65
PCDHA4-202ENST00000512229 ATP5IP56385 69 aaPredicted RBP10.97□□□□□ -0.65
PCDHA4-202ENST00000512229 OR1L6Q8NGR2 347 aa10.97□□□□□ -0.65
PCDHA4-202ENST00000512229 C18orf12Q96KH6 178 aa10.97□□□□□ -0.65
PCDHA4-202ENST00000512229 TRAPPC1Q9Y5R8 145 aa10.97□□□□□ -0.65
PCDHA4-202ENST00000512229 ZNF106Q9H2Y7 1883 aaKnown RBP10.97□□□□□ -0.65
PCDHA4-202ENST00000512229 LRTM2Q8N967 370 aa10.97□□□□□ -0.65
PCDHA4-202ENST00000512229 TMEM18Q96B42 140 aa10.97□□□□□ -0.65
PCDHA4-202ENST00000512229 GRAMD2BQ96HH9 432 aa10.97□□□□□ -0.65
PCDHA4-202ENST00000512229 WFIKKN1Q96NZ8 548 aa10.97□□□□□ -0.65
PCDHA4-202ENST00000512229 PSMG3Q9BT73 122 aaPredicted RBP10.97□□□□□ -0.65
PCDHA4-202ENST00000512229 WDR61Q9GZS3 305 aaKnown RBP10.97□□□□□ -0.65
PCDHA4-202ENST00000512229 EIF3GO75821 320 aaKnown RBP eCLIP10.96□□□□□ -0.65
PCDHA4-202ENST00000512229 SRP14P37108 136 aaKnown RBP10.96□□□□□ -0.65
PCDHA4-202ENST00000512229 ID3Q02535 119 aa10.96□□□□□ -0.65
PCDHA4-202ENST00000512229 PQLC2Q6ZP29 291 aa10.96□□□□□ -0.65
PCDHA4-202ENST00000512229 TNFRSF19Q9NS68 423 aa10.96□□□□□ -0.65
PCDHA4-202ENST00000512229 GAR1Q9NY12 217 aaKnown RBP10.96□□□□□ -0.65
PCDHA4-202ENST00000512229 ZNF581Q9P0T4 197 aa10.96□□□□□ -0.65
PCDHA4-202ENST00000512229 NAT8BQ9UHF3 227 aa10.96□□□□□ -0.65
PCDHA4-202ENST00000512229 MALRD1Q5VYJ5 2156 aa10.96□□□□□ -0.65
PCDHA4-202ENST00000512229 UNC80Q8N2C7 3258 aa10.96□□□□□ -0.65
PCDHA4-202ENST00000512229 FAM222BQ8WU58 562 aa10.96□□□□□ -0.65
PCDHA4-202ENST00000512229 DPM3Q9P2X0 92 aa10.96□□□□□ -0.65
PCDHA4-202ENST00000512229 K7ENP7 123 aa10.96□□□□□ -0.66
PCDHA4-202ENST00000512229 C1orf147Q96MC9 270 aaPredicted RBP10.96□□□□□ -0.66
PCDHA4-202ENST00000512229 TXNDC17Q9BRA2 123 aa10.96□□□□□ -0.66
PCDHA4-202ENST00000512229 PRUNE2Q8WUY3 3088 aa10.96□□□□□ -0.66
PCDHA4-202ENST00000512229 FOXH1O75593 365 aa10.95□□□□□ -0.66
PCDHA4-202ENST00000512229 GOSR1O95249 250 aa10.95□□□□□ -0.66
PCDHA4-202ENST00000512229 RANP62826 216 aaKnown RBP10.95□□□□□ -0.66
PCDHA4-202ENST00000512229 OR4A47Q6IF82 309 aa10.95□□□□□ -0.66
PCDHA4-202ENST00000512229 ANAPC16Q96DE5 110 aa10.95□□□□□ -0.66
PCDHA4-202ENST00000512229 AP1S3Q96PC3 154 aa10.95□□□□□ -0.66
PCDHA4-202ENST00000512229 AURKAIP1Q9NWT8 199 aaPredicted RBP10.95□□□□□ -0.66
PCDHA4-202ENST00000512229 SERTM2A0A1B0GWG4 89 aa10.95□□□□□ -0.66
PCDHA4-202ENST00000512229 CRYBA1P05813 215 aa10.95□□□□□ -0.66
PCDHA4-202ENST00000512229 SELLP14151 372 aa10.95□□□□□ -0.66
PCDHA4-202ENST00000512229 BMI1P35226 326 aa10.95□□□□□ -0.66
PCDHA4-202ENST00000512229 PDLIM4P50479 330 aa10.95□□□□□ -0.66
PCDHA4-202ENST00000512229 SNRPEP62304 92 aaKnown RBP10.95□□□□□ -0.66
PCDHA4-202ENST00000512229 PRSS33Q8NF86 280 aa10.95□□□□□ -0.66
PCDHA4-202ENST00000512229 PAXXQ9BUH6 204 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms