RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 PTPRBP23467 1997 aa1.17□□□□□ -2.22
CHD1-207ENST00000511628 GRIN2BQ13224 1484 aa1.17□□□□□ -2.22
CHD1-207ENST00000511628 SORL1Q92673 2214 aa1.16□□□□□ -2.22
CHD1-207ENST00000511628 C9orf84Q5VXU9 1444 aa1.16□□□□□ -2.22
CHD1-207ENST00000511628 CPAMD8Q8IZJ3 1885 aa1.16□□□□□ -2.22
CHD1-207ENST00000511628 MALRD1Q5VYJ5 2156 aa1.16□□□□□ -2.22
CHD1-207ENST00000511628 IGLV3-9A0A075B6K5 115 aa1.16□□□□□ -2.22
CHD1-207ENST00000511628 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.16□□□□□ -2.22
CHD1-207ENST00000511628 TRAV41A0A0B4J266 112 aa1.16□□□□□ -2.22
CHD1-207ENST00000511628 ZNF705FA8MVS1 300 aaPredicted RBP1.16□□□□□ -2.22
CHD1-207ENST00000511628 H3BT86 120 aa1.16□□□□□ -2.22
CHD1-207ENST00000511628 J3QQQ9 107 aa1.16□□□□□ -2.22
CHD1-207ENST00000511628 KCNK1O00180 336 aa1.16□□□□□ -2.22
CHD1-207ENST00000511628 CALB1P05937 261 aa1.16□□□□□ -2.22
CHD1-207ENST00000511628 CA5AP35218 305 aa1.16□□□□□ -2.22
CHD1-207ENST00000511628 MARCKSL1P49006 195 aa1.16□□□□□ -2.22
CHD1-207ENST00000511628 NKX2-5P52952 324 aaPredicted RBP1.16□□□□□ -2.22
CHD1-207ENST00000511628 AP2S1P53680 142 aaPredicted RBP1.16□□□□□ -2.22
CHD1-207ENST00000511628 FXYD7P58549 80 aa1.16□□□□□ -2.22
CHD1-207ENST00000511628 TAS2R20P59543 309 aa1.16□□□□□ -2.22
CHD1-207ENST00000511628 RPL26P61254 145 aaKnown RBP1.16□□□□□ -2.22
CHD1-207ENST00000511628 UBE2IP63279 158 aaKnown RBP1.16□□□□□ -2.22
CHD1-207ENST00000511628 ITGB3BPQ13352 177 aaPredicted RBP1.16□□□□□ -2.22
CHD1-207ENST00000511628 MIAQ16674 131 aa1.16□□□□□ -2.22
CHD1-207ENST00000511628 PTRHD1Q6GMV3 140 aaKnown RBP1.16□□□□□ -2.22
CHD1-207ENST00000511628 C8orf74Q6P047 294 aa1.16□□□□□ -2.22
CHD1-207ENST00000511628 C5orf46Q6UWT4 87 aa1.16□□□□□ -2.22
CHD1-207ENST00000511628 Q6ZRN7 208 aaPredicted RBP1.16□□□□□ -2.22
CHD1-207ENST00000511628 LRRC28Q86X40 367 aaPredicted RBP1.16□□□□□ -2.22
CHD1-207ENST00000511628 SLC22A24Q8N4F4 322 aa1.16□□□□□ -2.22
CHD1-207ENST00000511628 TMEM86BQ8N661 226 aa1.16□□□□□ -2.22
CHD1-207ENST00000511628 OR5J2Q8NH18 312 aa1.16□□□□□ -2.22
CHD1-207ENST00000511628 KLK6Q92876 244 aa1.16□□□□□ -2.22
CHD1-207ENST00000511628 SPZ1Q9BXG8 430 aa1.16□□□□□ -2.22
CHD1-207ENST00000511628 KRTAP4-1Q9BYQ7 146 aa1.16□□□□□ -2.22
CHD1-207ENST00000511628 UBAP1Q9NZ09 502 aa1.16□□□□□ -2.22
CHD1-207ENST00000511628 GUCA1BQ9UMX6 200 aa1.16□□□□□ -2.22
CHD1-207ENST00000511628 RPL26L1Q9UNX3 145 aaKnown RBP1.16□□□□□ -2.22
CHD1-207ENST00000511628 NUMA1Q14980 2115 aa1.16□□□□□ -2.22
CHD1-207ENST00000511628 MDC1Q14676 2089 aaKnown RBP1.16□□□□□ -2.22
CHD1-207ENST00000511628 ZNF532Q9HCE3 1301 aa1.15□□□□□ -2.22
CHD1-207ENST00000511628 KDM5BQ9UGL1 1544 aa1.15□□□□□ -2.22
CHD1-207ENST00000511628 GREB1Q4ZG55 1949 aa1.15□□□□□ -2.22
CHD1-207ENST00000511628 KIAA2026Q5HYC2 2103 aa1.15□□□□□ -2.23
CHD1-207ENST00000511628 IGHV1-69-2A0A0G2JMI3 117 aa1.15□□□□□ -2.23
CHD1-207ENST00000511628 DISC1C4P0D8 188 aa1.15□□□□□ -2.23
CHD1-207ENST00000511628 PGLYRP1O75594 196 aaPredicted RBP1.15□□□□□ -2.23
CHD1-207ENST00000511628 KRT7P08729 469 aa1.15□□□□□ -2.23
CHD1-207ENST00000511628 MYL12AP19105 171 aa1.15□□□□□ -2.23
CHD1-207ENST00000511628 ALDH3A1P30838 453 aa1.15□□□□□ -2.23
CHD1-207ENST00000511628 RPL28P46779 137 aaKnown RBP1.15□□□□□ -2.23
CHD1-207ENST00000511628 RAP1GDS1P52306 607 aa1.15□□□□□ -2.23
CHD1-207ENST00000511628 RAB5BP61020 215 aa1.15□□□□□ -2.23
CHD1-207ENST00000511628 PABPC1L2AQ5JQF8 200 aa1.15□□□□□ -2.23
CHD1-207ENST00000511628 FAM201AQ5SY85 155 aa1.15□□□□□ -2.23
CHD1-207ENST00000511628 Q6ZTI0 123 aa1.15□□□□□ -2.23
CHD1-207ENST00000511628 SSX8Q7RTT4 187 aa1.15□□□□□ -2.23
CHD1-207ENST00000511628 OR1M1Q8NGA1 313 aa1.15□□□□□ -2.23
CHD1-207ENST00000511628 OR8J2Q8NGG1 315 aa1.15□□□□□ -2.23
CHD1-207ENST00000511628 VCX3BQ9H321 246 aa1.15□□□□□ -2.23
CHD1-207ENST00000511628 FKBP14Q9NWM8 211 aa1.15□□□□□ -2.23
CHD1-207ENST00000511628 DENND4BO75064 1496 aaPredicted RBP1.15□□□□□ -2.23
CHD1-207ENST00000511628 RALGAPA2Q2PPJ7 1873 aa1.15□□□□□ -2.23
CHD1-207ENST00000511628 MAST2Q6P0Q8 1798 aa1.14□□□□□ -2.23
CHD1-207ENST00000511628 ZNF860A6NHJ4 632 aa1.14□□□□□ -2.23
CHD1-207ENST00000511628 I3L521 148 aa1.14□□□□□ -2.23
CHD1-207ENST00000511628 LEPROTO15243 131 aa1.14□□□□□ -2.23
CHD1-207ENST00000511628 DCTN3O75935 186 aa1.14□□□□□ -2.23
CHD1-207ENST00000511628 LYPLA2O95372 231 aa1.14□□□□□ -2.23
CHD1-207ENST00000511628 KRT75O95678 551 aa1.14□□□□□ -2.23
CHD1-207ENST00000511628 LGALS1P09382 135 aaKnown RBP1.14□□□□□ -2.23
CHD1-207ENST00000511628 UCHL1P09936 223 aa1.14□□□□□ -2.23
CHD1-207ENST00000511628 FAM228BP0C875 321 aa1.14□□□□□ -2.23
CHD1-207ENST00000511628 HIST1H1EP10412 219 aaKnown RBP1.14□□□□□ -2.23
CHD1-207ENST00000511628 FGF6P10767 208 aa1.14□□□□□ -2.23
CHD1-207ENST00000511628 MAGOHP61326 146 aaKnown RBP1.14□□□□□ -2.23
CHD1-207ENST00000511628 ERHP84090 104 aaKnown RBP1.14□□□□□ -2.23
CHD1-207ENST00000511628 SLC38A11Q08AI6 406 aa1.14□□□□□ -2.23
CHD1-207ENST00000511628 FABP9Q0Z7S8 132 aa1.14□□□□□ -2.23
CHD1-207ENST00000511628 GUK1Q16774 197 aa1.14□□□□□ -2.23
CHD1-207ENST00000511628 IMPG1Q17R60 797 aa1.14□□□□□ -2.23
CHD1-207ENST00000511628 ACSM3Q53FZ2 586 aa1.14□□□□□ -2.23
CHD1-207ENST00000511628 OPTNQ96CV9 577 aa1.14□□□□□ -2.23
CHD1-207ENST00000511628 ERMAPQ96PL5 475 aaPredicted RBP1.14□□□□□ -2.23
CHD1-207ENST00000511628 OR8D2Q9GZM6 311 aa1.14□□□□□ -2.23
CHD1-207ENST00000511628 CMTM6Q9NX76 183 aa1.14□□□□□ -2.23
CHD1-207ENST00000511628 PAQR5Q9NXK6 330 aaPredicted RBP1.14□□□□□ -2.23
CHD1-207ENST00000511628 SNAPC4Q5SXM2 1469 aa1.13□□□□□ -2.23
CHD1-207ENST00000511628 IGHV3-64A0A075B6Q5 118 aa1.13□□□□□ -2.23
CHD1-207ENST00000511628 A0A0J9YW62 118 aa1.13□□□□□ -2.23
CHD1-207ENST00000511628 EEF1E1-BLOC1S5C9J1V9 151 aa1.13□□□□□ -2.23
CHD1-207ENST00000511628 KLRC4O43908 158 aa1.13□□□□□ -2.23
CHD1-207ENST00000511628 AHSA1O95433 338 aa1.13□□□□□ -2.23
CHD1-207ENST00000511628 TNNC2P02585 160 aa1.13□□□□□ -2.23
CHD1-207ENST00000511628 RAB13P51153 203 aa1.13□□□□□ -2.23
CHD1-207ENST00000511628 IDH3GP51553 393 aaPredicted RBP1.13□□□□□ -2.23
CHD1-207ENST00000511628 TPI1P60174 286 aa1.13□□□□□ -2.23
CHD1-207ENST00000511628 RAB14P61106 215 aa1.13□□□□□ -2.23
CHD1-207ENST00000511628 IFITM2Q01629 132 aa1.13□□□□□ -2.23
CHD1-207ENST00000511628 OR2F1Q13607 317 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms