RNA–Protein interactions for RNA: ENST00000510331.1

LSM6-206, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-206ENST00000510331 ZBTB34Q8NCN2 500 aa14.25□□□□□ -0.13
LSM6-206ENST00000510331 VSTM2AQ8TAG5 236 aa14.25□□□□□ -0.13
LSM6-206ENST00000510331 MOB3AQ96BX8 217 aa14.25□□□□□ -0.13
LSM6-206ENST00000510331 SPIN2AQ99865 258 aa14.25□□□□□ -0.13
LSM6-206ENST00000510331 B9D2Q9BPU9 175 aa14.25□□□□□ -0.13
LSM6-206ENST00000510331 SPIN2BQ9BPZ2 258 aa14.25□□□□□ -0.13
LSM6-206ENST00000510331 ZNF2Q9BSG1 426 aaPredicted RBP14.25□□□□□ -0.13
LSM6-206ENST00000510331 MYOD1P15172 320 aa14.24□□□□□ -0.13
LSM6-206ENST00000510331 HLA-DMAP28067 261 aa14.24□□□□□ -0.13
LSM6-206ENST00000510331 HRH1P35367 487 aa14.24□□□□□ -0.13
LSM6-206ENST00000510331 RHOGP84095 191 aa14.24□□□□□ -0.13
LSM6-206ENST00000510331 CD69Q07108 199 aa14.24□□□□□ -0.13
LSM6-206ENST00000510331 AADACL3Q5VUY0 350 aa14.24□□□□□ -0.13
LSM6-206ENST00000510331 GPX8Q8TED1 209 aa14.24□□□□□ -0.13
LSM6-206ENST00000510331 MRPS26Q9BYN8 205 aaKnown RBP14.24□□□□□ -0.13
LSM6-206ENST00000510331 AKIP1Q9NQ31 210 aa14.24□□□□□ -0.13
LSM6-206ENST00000510331 ADAM30Q9UKF2 790 aa14.24□□□□□ -0.13
LSM6-206ENST00000510331 LSM4Q9Y4Z0 139 aaKnown RBP14.24□□□□□ -0.13
LSM6-206ENST00000510331 E7EUB6 86 aa14.23□□□□□ -0.13
LSM6-206ENST00000510331 RBFOX2O43251 390 aaKnown RBP eCLIP14.23□□□□□ -0.13
LSM6-206ENST00000510331 S1PR2O95136 353 aa14.23□□□□□ -0.13
LSM6-206ENST00000510331 HRASP01112 189 aa14.23□□□□□ -0.13
LSM6-206ENST00000510331 RLN1P04808 185 aa14.23□□□□□ -0.13
LSM6-206ENST00000510331 IL6RP08887 468 aaPredicted RBP14.23□□□□□ -0.13
LSM6-206ENST00000510331 GNRHRP30968 328 aa14.23□□□□□ -0.13
LSM6-206ENST00000510331 RPL27AP46776 148 aaKnown RBP14.23□□□□□ -0.13
LSM6-206ENST00000510331 RORCP51449 518 aa14.23□□□□□ -0.13
LSM6-206ENST00000510331 DCTN2Q13561 401 aaKnown RBP14.23□□□□□ -0.13
LSM6-206ENST00000510331 EXOSC2Q13868 293 aaKnown RBP14.23□□□□□ -0.13
LSM6-206ENST00000510331 OR4A47Q6IF82 309 aa14.23□□□□□ -0.13
LSM6-206ENST00000510331 ZNF343Q6P1L6 599 aa14.23□□□□□ -0.13
LSM6-206ENST00000510331 FYTTD1Q96QD9 318 aaKnown RBP14.23□□□□□ -0.13
LSM6-206ENST00000510331 RANGRFQ9HD47 186 aaPredicted RBP14.23□□□□□ -0.13
LSM6-206ENST00000510331 AREGP15514 252 aa14.22□□□□□ -0.13
LSM6-206ENST00000510331 SPNP16150 400 aa14.22□□□□□ -0.13
LSM6-206ENST00000510331 ZP3P21754 424 aa14.22□□□□□ -0.13
LSM6-206ENST00000510331 RPL8P62917 257 aaKnown RBP14.22□□□□□ -0.13
LSM6-206ENST00000510331 RNASE12Q5GAN4 147 aaKnown RBP14.22□□□□□ -0.13
LSM6-206ENST00000510331 LYSMD2Q8IV50 215 aa14.22□□□□□ -0.13
LSM6-206ENST00000510331 TTC9CQ8N5M4 171 aa14.22□□□□□ -0.13
LSM6-206ENST00000510331 USMG5Q96IX5 58 aa14.22□□□□□ -0.13
LSM6-206ENST00000510331 CMTM3Q96MX0 182 aa14.22□□□□□ -0.13
LSM6-206ENST00000510331 TRBV9A0A0B4J1U6 114 aa14.21□□□□□ -0.13
LSM6-206ENST00000510331 FAM223BA6NKX1 122 aa14.21□□□□□ -0.13
LSM6-206ENST00000510331 ZNF735P0CB33 412 aa14.21□□□□□ -0.13
LSM6-206ENST00000510331 HLA-GP17693 338 aa14.21□□□□□ -0.13
LSM6-206ENST00000510331 ALDH3B2P48448 385 aa14.21□□□□□ -0.13
LSM6-206ENST00000510331 TAS2R31P59538 309 aa14.21□□□□□ -0.13
LSM6-206ENST00000510331 DHRS11Q6UWP2 260 aa14.21□□□□□ -0.13
LSM6-206ENST00000510331 FAM223AQ8IWN6 122 aa14.21□□□□□ -0.13
LSM6-206ENST00000510331 RSRP1Q9BUV0 290 aa14.21□□□□□ -0.13
LSM6-206ENST00000510331 SCPEP1Q9HB40 452 aa14.21□□□□□ -0.13
LSM6-206ENST00000510331 HRASLSQ9HDD0 168 aa14.21□□□□□ -0.13
LSM6-206ENST00000510331 BET1LQ9NYM9 111 aa14.21□□□□□ -0.13
LSM6-206ENST00000510331 PEF1Q9UBV8 284 aaKnown RBP14.21□□□□□ -0.13
LSM6-206ENST00000510331 TRAV3A0A0B4J244 114 aa14.2□□□□□ -0.14
LSM6-206ENST00000510331 SMIM31A0A1B0GVY4 71 aa14.2□□□□□ -0.14
LSM6-206ENST00000510331 CGB1A6NKQ9 187 aa14.2□□□□□ -0.14
LSM6-206ENST00000510331 FAM25AB3EWG3 89 aa14.2□□□□□ -0.14
LSM6-206ENST00000510331 FAM25CB3EWG5 89 aa14.2□□□□□ -0.14
LSM6-206ENST00000510331 FAM25GB3EWG6 89 aa14.2□□□□□ -0.14
LSM6-206ENST00000510331 OR2J3O76001 311 aa14.2□□□□□ -0.14
LSM6-206ENST00000510331 HPRT1P00492 218 aa14.2□□□□□ -0.14
LSM6-206ENST00000510331 RPA2P15927 270 aa14.2□□□□□ -0.14
LSM6-206ENST00000510331 RCVRNP35243 200 aa14.2□□□□□ -0.14
LSM6-206ENST00000510331 MAS1LP35410 378 aa14.2□□□□□ -0.14
LSM6-206ENST00000510331 SYNJ2BPP57105 145 aa14.2□□□□□ -0.14
LSM6-206ENST00000510331 GPR141Q7Z602 305 aa14.2□□□□□ -0.14
LSM6-206ENST00000510331 OR6Q1Q8NGQ2 317 aa14.2□□□□□ -0.14
LSM6-206ENST00000510331 AP3S1Q92572 193 aa14.2□□□□□ -0.14
LSM6-206ENST00000510331 OR4C12Q96R67 309 aa14.2□□□□□ -0.14
LSM6-206ENST00000510331 TMEM140Q9NV12 185 aa14.2□□□□□ -0.14
LSM6-206ENST00000510331 ZNF257Q9Y2Q1 563 aa14.2□□□□□ -0.14
LSM6-206ENST00000510331 NPIPB5A8MRT5 1133 aa14.19□□□□□ -0.14
LSM6-206ENST00000510331 BMPR1BO00238 502 aa14.19□□□□□ -0.14
LSM6-206ENST00000510331 PGLYRP1O75594 196 aaPredicted RBP14.19□□□□□ -0.14
LSM6-206ENST00000510331 REG1AP05451 166 aa14.19□□□□□ -0.14
LSM6-206ENST00000510331 NQO2P16083 231 aa14.19□□□□□ -0.14
LSM6-206ENST00000510331 KLF5Q13887 457 aaPredicted RBP14.19□□□□□ -0.14
LSM6-206ENST00000510331 POU2AF1Q16633 256 aa14.19□□□□□ -0.14
LSM6-206ENST00000510331 C15orf32Q32M92 178 aa14.19□□□□□ -0.14
LSM6-206ENST00000510331 MZT2AQ6P582 158 aa14.19□□□□□ -0.14
LSM6-206ENST00000510331 NECAP1Q8NC96 275 aa14.19□□□□□ -0.14
LSM6-206ENST00000510331 OR4A5Q8NH83 315 aa14.19□□□□□ -0.14
LSM6-206ENST00000510331 BORCS5Q969J3 196 aa14.19□□□□□ -0.14
LSM6-206ENST00000510331 PLEKHA2Q9HB19 425 aa14.19□□□□□ -0.14
LSM6-206ENST00000510331 SLC2A9Q9NRM0 540 aa14.19□□□□□ -0.14
LSM6-206ENST00000510331 COMMD9Q9P000 198 aa14.19□□□□□ -0.14
LSM6-206ENST00000510331 STAB2Q8WWQ8 2551 aa14.19□□□□□ -0.14
LSM6-206ENST00000510331 DPPA5A6NC42 116 aa14.18□□□□□ -0.14
LSM6-206ENST00000510331 GP9P14770 177 aa14.18□□□□□ -0.14
LSM6-206ENST00000510331 ZNF182P17025 639 aaPredicted RBP14.18□□□□□ -0.14
LSM6-206ENST00000510331 OR2B8PP59922 312 aa14.18□□□□□ -0.14
LSM6-206ENST00000510331 ATP5G2Q06055 141 aa14.18□□□□□ -0.14
LSM6-206ENST00000510331 SPCS2Q15005 226 aa14.18□□□□□ -0.14
LSM6-206ENST00000510331 RPEL1Q2QD12 228 aa14.18□□□□□ -0.14
LSM6-206ENST00000510331 PHLDA2Q53GA4 152 aa14.18□□□□□ -0.14
LSM6-206ENST00000510331 SLC25A42Q86VD7 318 aa14.18□□□□□ -0.14
LSM6-206ENST00000510331 DMBX1Q8NFW5 382 aa14.18□□□□□ -0.14
LSM6-206ENST00000510331 OR9G4Q8NGQ1 327 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms