RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 NAPSAO96009 420 aa7.55□□□□□ -1.2
SNF8-207ENST00000509995 DEFA4P12838 97 aa7.55□□□□□ -1.2
SNF8-207ENST00000509995 EMP1P54849 157 aa7.55□□□□□ -1.2
SNF8-207ENST00000509995 PAFAH1B2P68402 229 aa7.55□□□□□ -1.2
SNF8-207ENST00000509995 TMED1Q13445 227 aa7.55□□□□□ -1.2
SNF8-207ENST00000509995 GLIPR1L1Q6UWM5 242 aa7.55□□□□□ -1.2
SNF8-207ENST00000509995 MOB1BQ7L9L4 216 aa7.55□□□□□ -1.2
SNF8-207ENST00000509995 FAM24BQ8N5W8 94 aa7.55□□□□□ -1.2
SNF8-207ENST00000509995 TMEM116Q8NCL8 245 aa7.55□□□□□ -1.2
SNF8-207ENST00000509995 OSR1Q8TAX0 266 aaPredicted RBP7.55□□□□□ -1.2
SNF8-207ENST00000509995 SETD6Q8TBK2 473 aa7.55□□□□□ -1.2
SNF8-207ENST00000509995 RIBC2Q9H4K1 309 aa7.55□□□□□ -1.2
SNF8-207ENST00000509995 SDHAF2Q9NX18 166 aa7.55□□□□□ -1.2
SNF8-207ENST00000509995 DKK2Q9UBU2 259 aa7.55□□□□□ -1.2
SNF8-207ENST00000509995 TMEM189A5PLL7 270 aa7.54□□□□□ -1.2
SNF8-207ENST00000509995 ZAR1LA6NP61 321 aa7.54□□□□□ -1.2
SNF8-207ENST00000509995 CRTAPO75718 401 aaPredicted RBP7.54□□□□□ -1.2
SNF8-207ENST00000509995 IFNA5P01569 189 aa7.54□□□□□ -1.2
SNF8-207ENST00000509995 REG1AP05451 166 aa7.54□□□□□ -1.2
SNF8-207ENST00000509995 CD2P06729 351 aa7.54□□□□□ -1.2
SNF8-207ENST00000509995 ZNF735P0CB33 412 aa7.54□□□□□ -1.2
SNF8-207ENST00000509995 PTBP1P26599 531 aaKnown RBP eCLIP7.54□□□□□ -1.2
SNF8-207ENST00000509995 RPL27AP46776 148 aaKnown RBP7.54□□□□□ -1.2
SNF8-207ENST00000509995 HLA-DRB3P79483 266 aa7.54□□□□□ -1.2
SNF8-207ENST00000509995 TPBGQ13641 420 aa7.54□□□□□ -1.2
SNF8-207ENST00000509995 MUL1Q969V5 352 aa7.54□□□□□ -1.2
SNF8-207ENST00000509995 BSCL2Q96G97 398 aaPredicted RBP7.54□□□□□ -1.2
SNF8-207ENST00000509995 C5orf30Q96GV9 206 aa7.54□□□□□ -1.2
SNF8-207ENST00000509995 OR2D2Q9H210 308 aa7.54□□□□□ -1.2
SNF8-207ENST00000509995 Q9H3A6 140 aa7.54□□□□□ -1.2
SNF8-207ENST00000509995 CHMP1AQ9HD42 196 aaPredicted RBP7.54□□□□□ -1.2
SNF8-207ENST00000509995 LINC00588Q9Y4M8 146 aa7.54□□□□□ -1.2
SNF8-207ENST00000509995 IGHV3-49A0A0A0MS15 119 aa7.53□□□□□ -1.2
SNF8-207ENST00000509995 J3QRE1 110 aa7.53□□□□□ -1.2
SNF8-207ENST00000509995 PRDX6P30041 224 aa7.53□□□□□ -1.2
SNF8-207ENST00000509995 CCL18P55774 89 aa7.53□□□□□ -1.2
SNF8-207ENST00000509995 OXA1LQ15070 435 aa7.53□□□□□ -1.2
SNF8-207ENST00000509995 FAM222AQ5U5X8 452 aa7.53□□□□□ -1.2
SNF8-207ENST00000509995 AWAT2Q6E213 333 aa7.53□□□□□ -1.2
SNF8-207ENST00000509995 SPSB3Q6PJ21 355 aa7.53□□□□□ -1.2
SNF8-207ENST00000509995 ZNF414Q96IQ9 312 aa7.53□□□□□ -1.2
SNF8-207ENST00000509995 FAAP24Q9BTP7 215 aa7.53□□□□□ -1.2
SNF8-207ENST00000509995 MS4A6AQ9H2W1 248 aa7.53□□□□□ -1.2
SNF8-207ENST00000509995 RDH8Q9NYR8 311 aa7.53□□□□□ -1.2
SNF8-207ENST00000509995 DNASE2O00115 360 aaPredicted RBP7.52□□□□□ -1.21
SNF8-207ENST00000509995 EREGO14944 169 aa7.52□□□□□ -1.21
SNF8-207ENST00000509995 PLA2G1BP04054 148 aaKnown RBP7.52□□□□□ -1.21
SNF8-207ENST00000509995 DAPP51397 102 aa7.52□□□□□ -1.21
SNF8-207ENST00000509995 PSMD7P51665 324 aa7.52□□□□□ -1.21
SNF8-207ENST00000509995 PLA2G7Q13093 441 aa7.52□□□□□ -1.21
SNF8-207ENST00000509995 TCF24Q7RTU0 167 aa7.52□□□□□ -1.21
SNF8-207ENST00000509995 C6orf201Q7Z4U5 140 aa7.52□□□□□ -1.21
SNF8-207ENST00000509995 DHFR2Q86XF0 187 aa7.52□□□□□ -1.21
SNF8-207ENST00000509995 MFSD4AQ8N468 514 aa7.52□□□□□ -1.21
SNF8-207ENST00000509995 RFKQ969G6 155 aa7.52□□□□□ -1.21
SNF8-207ENST00000509995 ORAI1Q96D31 301 aa7.52□□□□□ -1.21
SNF8-207ENST00000509995 NEDD4LQ96PU5 975 aa7.52□□□□□ -1.21
SNF8-207ENST00000509995 SRSF8Q9BRL6 282 aaKnown RBP7.52□□□□□ -1.21
SNF8-207ENST00000509995 Q9H8V8 135 aa7.52□□□□□ -1.21
SNF8-207ENST00000509995 IGHV3OR16-13A0A075B7E8 117 aa7.51□□□□□ -1.21
SNF8-207ENST00000509995 IGHV3-74A0A0B4J1X5 117 aa7.51□□□□□ -1.21
SNF8-207ENST00000509995 TRAV2A0A0B4J234 112 aa7.51□□□□□ -1.21
SNF8-207ENST00000509995 KNCNA6PVL3 124 aa7.51□□□□□ -1.21
SNF8-207ENST00000509995 E9PI62 339 aa7.51□□□□□ -1.21
SNF8-207ENST00000509995 OXTP01178 125 aa7.51□□□□□ -1.21
SNF8-207ENST00000509995 CD5P06127 495 aa7.51□□□□□ -1.21
SNF8-207ENST00000509995 USF2Q15853 346 aaPredicted RBP7.51□□□□□ -1.21
SNF8-207ENST00000509995 UBE2UQ5VVX9 321 aa7.51□□□□□ -1.21
SNF8-207ENST00000509995 Q6ZRN7 208 aaPredicted RBP7.51□□□□□ -1.21
SNF8-207ENST00000509995 DEFB107AQ8IZN7 70 aa7.51□□□□□ -1.21
SNF8-207ENST00000509995 JAGN1Q8N5M9 183 aa7.51□□□□□ -1.21
SNF8-207ENST00000509995 VN1R17PQ8TDU5 208 aa7.51□□□□□ -1.21
SNF8-207ENST00000509995 GPR148Q8TDV2 347 aa7.51□□□□□ -1.21
SNF8-207ENST00000509995 NEU1Q99519 415 aa7.51□□□□□ -1.21
SNF8-207ENST00000509995 THYN1Q9P016 225 aa7.51□□□□□ -1.21
SNF8-207ENST00000509995 DNAH8Q96JB1 4490 aa7.51□□□□□ -1.21
SNF8-207ENST00000509995 TRBV6-6A0A0A6YYG2 114 aa7.5□□□□□ -1.21
SNF8-207ENST00000509995 IGKV1-6A0A0C4DH72 117 aa7.5□□□□□ -1.21
SNF8-207ENST00000509995 A0A1W2PPQ1 181 aa7.5□□□□□ -1.21
SNF8-207ENST00000509995 LINC00473A8K010 186 aa7.5□□□□□ -1.21
SNF8-207ENST00000509995 NUPL2O15504 423 aaKnown RBP7.5□□□□□ -1.21
SNF8-207ENST00000509995 KBTBD11O94819 623 aa7.5□□□□□ -1.21
SNF8-207ENST00000509995 IGFBP3P17936 291 aaPredicted RBP7.5□□□□□ -1.21
SNF8-207ENST00000509995 DUTP33316 252 aaKnown RBP7.5□□□□□ -1.21
SNF8-207ENST00000509995 MAS1LP35410 378 aa7.5□□□□□ -1.21
SNF8-207ENST00000509995 ERVFC1-1P60608 527 aa7.5□□□□□ -1.21
SNF8-207ENST00000509995 ZNF705AQ6ZN79 300 aaPredicted RBP7.5□□□□□ -1.21
SNF8-207ENST00000509995 ADGRG5Q8IZF4 528 aa7.5□□□□□ -1.21
SNF8-207ENST00000509995 VKORC1L1Q8N0U8 176 aa7.5□□□□□ -1.21
SNF8-207ENST00000509995 ACBD7Q8N6N7 88 aa7.5□□□□□ -1.21
SNF8-207ENST00000509995 OR6M1Q8NGM8 313 aa7.5□□□□□ -1.21
SNF8-207ENST00000509995 ADTRPQ96IZ2 230 aa7.5□□□□□ -1.21
SNF8-207ENST00000509995 OR10C1Q96KK4 312 aa7.5□□□□□ -1.21
SNF8-207ENST00000509995 C1QTNF4Q9BXJ3 329 aa7.5□□□□□ -1.21
SNF8-207ENST00000509995 OR51E2Q9H255 320 aa7.5□□□□□ -1.21
SNF8-207ENST00000509995 IMPAD1Q9NX62 359 aa7.5□□□□□ -1.21
SNF8-207ENST00000509995 TNXBP22105 4242 aa7.5□□□□□ -1.21
SNF8-207ENST00000509995 RPS10-NUDT3A0A1W2PQS6 291 aa7.49□□□□□ -1.21
SNF8-207ENST00000509995 ZNF705FA8MVS1 300 aaPredicted RBP7.49□□□□□ -1.21
SNF8-207ENST00000509995 HMGB1P1B2RPK0 211 aaPredicted RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms