RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 DHRS11Q6UWP2 260 aa13.68□□□□□ -0.22
TPM3-220ENST00000509601 SLC5A7Q9GZV3 580 aa13.68□□□□□ -0.22
TPM3-220ENST00000509601 ANAPC10Q9UM13 185 aa13.68□□□□□ -0.22
TPM3-220ENST00000509601 DMRT1Q9Y5R6 373 aa13.68□□□□□ -0.22
TPM3-220ENST00000509601 CSN3P07498 182 aa13.67□□□□□ -0.22
TPM3-220ENST00000509601 ZNF735P0CB33 412 aa13.67□□□□□ -0.22
TPM3-220ENST00000509601 MYOD1P15172 320 aa13.67□□□□□ -0.22
TPM3-220ENST00000509601 ATP5G2Q06055 141 aa13.67□□□□□ -0.22
TPM3-220ENST00000509601 UBE2NLQ5JXB2 153 aa13.67□□□□□ -0.22
TPM3-220ENST00000509601 ZNF818PQ6ZRF7 136 aa13.67□□□□□ -0.22
TPM3-220ENST00000509601 C19orf35Q6ZS72 473 aa13.67□□□□□ -0.22
TPM3-220ENST00000509601 SSX9Q7RTT3 188 aa13.67□□□□□ -0.22
TPM3-220ENST00000509601 SPAG16Q8N0X2 631 aa13.67□□□□□ -0.22
TPM3-220ENST00000509601 SAMD12Q8N8I0 201 aa13.67□□□□□ -0.22
TPM3-220ENST00000509601 VSTM2AQ8TAG5 236 aa13.67□□□□□ -0.22
TPM3-220ENST00000509601 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.66□□□□□ -0.22
TPM3-220ENST00000509601 FAM223BA6NKX1 122 aa13.66□□□□□ -0.22
TPM3-220ENST00000509601 BMPR1BO00238 502 aa13.66□□□□□ -0.22
TPM3-220ENST00000509601 HRASP01112 189 aa13.66□□□□□ -0.22
TPM3-220ENST00000509601 NAT1P18440 290 aa13.66□□□□□ -0.22
TPM3-220ENST00000509601 GNRHRP30968 328 aa13.66□□□□□ -0.22
TPM3-220ENST00000509601 MAS1LP35410 378 aa13.66□□□□□ -0.22
TPM3-220ENST00000509601 KIR2DS2P43631 304 aa13.66□□□□□ -0.22
TPM3-220ENST00000509601 RPL27AP46776 148 aaKnown RBP13.66□□□□□ -0.22
TPM3-220ENST00000509601 RFX2P48378 723 aa13.66□□□□□ -0.22
TPM3-220ENST00000509601 MECP2P51608 486 aaKnown RBP13.66□□□□□ -0.22
TPM3-220ENST00000509601 TAS2R20P59543 309 aa13.66□□□□□ -0.22
TPM3-220ENST00000509601 FXYD4P59646 89 aa13.66□□□□□ -0.22
TPM3-220ENST00000509601 KLK9Q2XQG4 91 aa13.66□□□□□ -0.22
TPM3-220ENST00000509601 ANKRD13BQ86YJ7 626 aa13.66□□□□□ -0.22
TPM3-220ENST00000509601 LYSMD2Q8IV50 215 aa13.66□□□□□ -0.22
TPM3-220ENST00000509601 FAM223AQ8IWN6 122 aa13.66□□□□□ -0.22
TPM3-220ENST00000509601 NECAP1Q8NC96 275 aa13.66□□□□□ -0.22
TPM3-220ENST00000509601 SLC25A46Q96AG3 418 aa13.66□□□□□ -0.22
TPM3-220ENST00000509601 FANCD2OSQ96PS1 177 aa13.66□□□□□ -0.22
TPM3-220ENST00000509601 RSRP1Q9BUV0 290 aa13.66□□□□□ -0.22
TPM3-220ENST00000509601 SLC2A9Q9NRM0 540 aa13.66□□□□□ -0.22
TPM3-220ENST00000509601 KLK9Q9UKQ9 250 aa13.66□□□□□ -0.22
TPM3-220ENST00000509601 CGB1A6NKQ9 187 aa13.65□□□□□ -0.22
TPM3-220ENST00000509601 NPIPB5A8MRT5 1133 aa13.65□□□□□ -0.22
TPM3-220ENST00000509601 SULT1C2O00338 296 aa13.65□□□□□ -0.22
TPM3-220ENST00000509601 RBFOX2O43251 390 aaKnown RBP eCLIP13.65□□□□□ -0.22
TPM3-220ENST00000509601 OR2J3O76001 311 aa13.65□□□□□ -0.22
TPM3-220ENST00000509601 CRYGCP07315 174 aa13.65□□□□□ -0.22
TPM3-220ENST00000509601 FRMD6-AS1P0C7T7 363 aa13.65□□□□□ -0.22
TPM3-220ENST00000509601 TATDN3Q17R31 274 aa13.65□□□□□ -0.22
TPM3-220ENST00000509601 RPEL1Q2QD12 228 aa13.65□□□□□ -0.22
TPM3-220ENST00000509601 OR4A47Q6IF82 309 aa13.65□□□□□ -0.22
TPM3-220ENST00000509601 SLC25A42Q86VD7 318 aa13.65□□□□□ -0.22
TPM3-220ENST00000509601 FYTTD1Q96QD9 318 aaKnown RBP13.65□□□□□ -0.22
TPM3-220ENST00000509601 FUNDC2Q9BWH2 189 aa13.65□□□□□ -0.22
TPM3-220ENST00000509601 VCX3AQ9NNX9 186 aa13.65□□□□□ -0.22
TPM3-220ENST00000509601 BET1LQ9NYM9 111 aa13.65□□□□□ -0.22
TPM3-220ENST00000509601 SIGLEC8Q9NYZ4 499 aa13.65□□□□□ -0.22
TPM3-220ENST00000509601 ZNF257Q9Y2Q1 563 aa13.65□□□□□ -0.22
TPM3-220ENST00000509601 TRAV3A0A0B4J244 114 aa13.64□□□□□ -0.23
TPM3-220ENST00000509601 HPRT1P00492 218 aa13.64□□□□□ -0.23
TPM3-220ENST00000509601 AREGP15514 252 aa13.64□□□□□ -0.23
TPM3-220ENST00000509601 NCS1P62166 190 aa13.64□□□□□ -0.23
TPM3-220ENST00000509601 RPL8P62917 257 aaKnown RBP13.64□□□□□ -0.23
TPM3-220ENST00000509601 EXOSC2Q13868 293 aaKnown RBP13.64□□□□□ -0.23
TPM3-220ENST00000509601 POU2AF1Q16633 256 aa13.64□□□□□ -0.23
TPM3-220ENST00000509601 TMEM69Q5SWH9 247 aa13.64□□□□□ -0.23
TPM3-220ENST00000509601 ADAMTSL5Q6ZMM2 481 aa13.64□□□□□ -0.23
TPM3-220ENST00000509601 KCTD12Q96CX2 325 aaKnown RBP13.64□□□□□ -0.23
TPM3-220ENST00000509601 DYNC2H1Q8NCM8 4307 aaKnown RBP13.63□□□□□ -0.23
TPM3-220ENST00000509601 NDUFB8O95169 186 aa13.63□□□□□ -0.23
TPM3-220ENST00000509601 PMP2P02689 132 aa13.63□□□□□ -0.23
TPM3-220ENST00000509601 EIF4EP06730 217 aaKnown RBP13.63□□□□□ -0.23
TPM3-220ENST00000509601 CTRB1P17538 263 aa13.63□□□□□ -0.23
TPM3-220ENST00000509601 HLA-GP17693 338 aa13.63□□□□□ -0.23
TPM3-220ENST00000509601 PSMB6P28072 239 aa13.63□□□□□ -0.23
TPM3-220ENST00000509601 TAS2R31P59538 309 aa13.63□□□□□ -0.23
TPM3-220ENST00000509601 C15orf32Q32M92 178 aa13.63□□□□□ -0.23
TPM3-220ENST00000509601 CTRB2Q6GPI1 263 aa13.63□□□□□ -0.23
TPM3-220ENST00000509601 TMEM17Q86X19 198 aa13.63□□□□□ -0.23
TPM3-220ENST00000509601 OR4A5Q8NH83 315 aa13.63□□□□□ -0.23
TPM3-220ENST00000509601 IFT46Q9NQC8 304 aa13.63□□□□□ -0.23
TPM3-220ENST00000509601 C19orf73Q9NVV2 129 aa13.63□□□□□ -0.23
TPM3-220ENST00000509601 EHFQ9NZC4 300 aa13.63□□□□□ -0.23
TPM3-220ENST00000509601 FBXL7Q9UJT9 491 aa13.63□□□□□ -0.23
TPM3-220ENST00000509601 UPK2O00526 184 aa13.62□□□□□ -0.23
TPM3-220ENST00000509601 PGLYRP1O75594 196 aaPredicted RBP13.62□□□□□ -0.23
TPM3-220ENST00000509601 PRSS3P35030 304 aa13.62□□□□□ -0.23
TPM3-220ENST00000509601 VBP1P61758 197 aa13.62□□□□□ -0.23
TPM3-220ENST00000509601 CATR1Q13166 79 aa13.62□□□□□ -0.23
TPM3-220ENST00000509601 GPX8Q8TED1 209 aa13.62□□□□□ -0.23
TPM3-220ENST00000509601 MOB3AQ96BX8 217 aa13.62□□□□□ -0.23
TPM3-220ENST00000509601 AIFM2Q9BRQ8 373 aa13.62□□□□□ -0.23
TPM3-220ENST00000509601 ZNF2Q9BSG1 426 aaPredicted RBP13.62□□□□□ -0.23
TPM3-220ENST00000509601 THAP7Q9BT49 309 aaPredicted RBP13.62□□□□□ -0.23
TPM3-220ENST00000509601 COMMD3Q9UBI1 195 aa13.62□□□□□ -0.23
TPM3-220ENST00000509601 SACSQ9NZJ4 4579 aa13.61□□□□□ -0.23
TPM3-220ENST00000509601 DPPA5A6NC42 116 aa13.61□□□□□ -0.23
TPM3-220ENST00000509601 IZUMO1RA6ND01 250 aa13.61□□□□□ -0.23
TPM3-220ENST00000509601 A8MZ25 164 aa13.61□□□□□ -0.23
TPM3-220ENST00000509601 PPP5D1E7EU14 171 aa13.61□□□□□ -0.23
TPM3-220ENST00000509601 H0Y980 276 aa13.61□□□□□ -0.23
TPM3-220ENST00000509601 IGHV4-30-4P0DP06 118 aa13.61□□□□□ -0.23
TPM3-220ENST00000509601 NQO2P16083 231 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms