RNA–Protein interactions for RNA: ENST00000509206.1

RNF4-211, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-211ENST00000509206 ABHD14BQ96IU4 210 aa2.73□□□□□ -1.97
RNF4-211ENST00000509206 NSL1Q96IY1 281 aa2.73□□□□□ -1.97
RNF4-211ENST00000509206 HARBI1Q96MB7 349 aa2.73□□□□□ -1.97
RNF4-211ENST00000509206 TBX5Q99593 518 aa2.73□□□□□ -1.97
RNF4-211ENST00000509206 HOPXQ9BPY8 73 aaPredicted RBP2.73□□□□□ -1.97
RNF4-211ENST00000509206 TMPRSS5Q9H3S3 457 aa2.73□□□□□ -1.97
RNF4-211ENST00000509206 Q9H8V8 135 aa2.73□□□□□ -1.97
RNF4-211ENST00000509206 ZNF556Q9HAH1 456 aa2.73□□□□□ -1.97
RNF4-211ENST00000509206 SLC35D1Q9NTN3 355 aa2.73□□□□□ -1.97
RNF4-211ENST00000509206 PAK1IP1Q9NWT1 392 aaPredicted RBP2.73□□□□□ -1.97
RNF4-211ENST00000509206 CLEC5AQ9NY25 188 aa2.73□□□□□ -1.97
RNF4-211ENST00000509206 TVP23BQ9NYZ1 205 aa2.73□□□□□ -1.97
RNF4-211ENST00000509206 GHRLQ9UBU3 117 aa2.73□□□□□ -1.97
RNF4-211ENST00000509206 VPS13BQ7Z7G8 4022 aa2.73□□□□□ -1.97
RNF4-211ENST00000509206 TRBV7-1A0A0A6YYK4 115 aa2.72□□□□□ -1.97
RNF4-211ENST00000509206 TRBV9A0A0B4J1U6 114 aa2.72□□□□□ -1.97
RNF4-211ENST00000509206 TEX48A0A1B0GUV7 120 aa2.72□□□□□ -1.97
RNF4-211ENST00000509206 A0A1W2PPQ1 181 aa2.72□□□□□ -1.97
RNF4-211ENST00000509206 TMEM189A5PLL7 270 aa2.72□□□□□ -1.97
RNF4-211ENST00000509206 ZNF705EA8MWA4 302 aaPredicted RBP2.72□□□□□ -1.97
RNF4-211ENST00000509206 ZNF780AO75290 641 aaPredicted RBP2.72□□□□□ -1.97
RNF4-211ENST00000509206 CA11O75493 328 aa2.72□□□□□ -1.97
RNF4-211ENST00000509206 SULT1C4O75897 302 aa2.72□□□□□ -1.97
RNF4-211ENST00000509206 CDRT1O95170 752 aa2.72□□□□□ -1.97
RNF4-211ENST00000509206 MT-ND2P03891 347 aa2.72□□□□□ -1.97
RNF4-211ENST00000509206 IGKV1-16P04430 117 aa2.72□□□□□ -1.97
RNF4-211ENST00000509206 EIF4EP06730 217 aaKnown RBP2.72□□□□□ -1.97
RNF4-211ENST00000509206 SPP1P10451 314 aa2.72□□□□□ -1.97
RNF4-211ENST00000509206 GTF2F2P13984 249 aa2.72□□□□□ -1.97
RNF4-211ENST00000509206 HIST1H1BP16401 226 aaKnown RBP2.72□□□□□ -1.97
RNF4-211ENST00000509206 SERPINA2P20848 420 aa2.72□□□□□ -1.97
RNF4-211ENST00000509206 GPR183P32249 361 aa2.72□□□□□ -1.97
RNF4-211ENST00000509206 CAPGP40121 348 aa2.72□□□□□ -1.97
RNF4-211ENST00000509206 SOX2P48431 317 aa2.72□□□□□ -1.97
RNF4-211ENST00000509206 HMGA2P52926 109 aa2.72□□□□□ -1.97
RNF4-211ENST00000509206 CRISP1P54107 249 aa2.72□□□□□ -1.97
RNF4-211ENST00000509206 RBM11P57052 281 aaKnown RBP2.72□□□□□ -1.97
RNF4-211ENST00000509206 DEFB131AP59861 70 aa2.72□□□□□ -1.97
RNF4-211ENST00000509206 KRTAP10-1P60331 282 aa2.72□□□□□ -1.97
RNF4-211ENST00000509206 MAGOHP61326 146 aaKnown RBP2.72□□□□□ -1.97
RNF4-211ENST00000509206 RPS27AP62979 156 aaKnown RBP2.72□□□□□ -1.97
RNF4-211ENST00000509206 HAMPP81172 84 aa2.72□□□□□ -1.97
RNF4-211ENST00000509206 PPP1R8Q12972 351 aaKnown RBP2.72□□□□□ -1.97
RNF4-211ENST00000509206 USF2Q15853 346 aaPredicted RBP2.72□□□□□ -1.97
RNF4-211ENST00000509206 LY6G6FQ5SQ64 297 aa2.72□□□□□ -1.97
RNF4-211ENST00000509206 DMKNQ6E0U4 476 aaPredicted RBP2.72□□□□□ -1.97
RNF4-211ENST00000509206 SSX9Q7RTT3 188 aa2.72□□□□□ -1.97
RNF4-211ENST00000509206 AMIGO2Q86SJ2 522 aa2.72□□□□□ -1.97
RNF4-211ENST00000509206 OR10G2Q8NGC3 310 aa2.72□□□□□ -1.97
RNF4-211ENST00000509206 OR10AC1Q8NH08 325 aa2.72□□□□□ -1.97
RNF4-211ENST00000509206 ZNRF2Q8NHG8 242 aa2.72□□□□□ -1.97
RNF4-211ENST00000509206 SETD6Q8TBK2 473 aa2.72□□□□□ -1.97
RNF4-211ENST00000509206 CXorf58Q96LI9 332 aa2.72□□□□□ -1.97
RNF4-211ENST00000509206 NSMCE2Q96MF7 247 aa2.72□□□□□ -1.97
RNF4-211ENST00000509206 OR2A7Q96R45 310 aa2.72□□□□□ -1.97
RNF4-211ENST00000509206 SRSF8Q9BRL6 282 aaKnown RBP2.72□□□□□ -1.97
RNF4-211ENST00000509206 NIPSNAP3BQ9BS92 247 aa2.72□□□□□ -1.97
RNF4-211ENST00000509206 REEP1Q9H902 201 aa2.72□□□□□ -1.97
RNF4-211ENST00000509206 DAZ1Q9NQZ3 744 aaKnown RBP2.72□□□□□ -1.97
RNF4-211ENST00000509206 CLN6Q9NWW5 311 aa2.72□□□□□ -1.97
RNF4-211ENST00000509206 GNG8Q9UK08 70 aa2.72□□□□□ -1.97
RNF4-211ENST00000509206 ZNF257Q9Y2Q1 563 aa2.72□□□□□ -1.97
RNF4-211ENST00000509206 SAMHD1Q9Y3Z3 626 aaKnown RBP2.72□□□□□ -1.97
RNF4-211ENST00000509206 PEX16Q9Y5Y5 336 aa2.72□□□□□ -1.97
RNF4-211ENST00000509206 IGHV3OR16-12A0A075B7B8 117 aa2.71□□□□□ -1.98
RNF4-211ENST00000509206 M0R1X1 148 aa2.71□□□□□ -1.98
RNF4-211ENST00000509206 NME4O00746 187 aa2.71□□□□□ -1.98
RNF4-211ENST00000509206 ZNF207O43670 478 aaKnown RBP2.71□□□□□ -1.98
RNF4-211ENST00000509206 DFFBO76075 338 aa2.71□□□□□ -1.98
RNF4-211ENST00000509206 YIF1AO95070 293 aa2.71□□□□□ -1.98
RNF4-211ENST00000509206 HTR1AP08908 422 aa2.71□□□□□ -1.98
RNF4-211ENST00000509206 RAB3AP20336 220 aa2.71□□□□□ -1.98
RNF4-211ENST00000509206 SLC2A5P22732 501 aa2.71□□□□□ -1.98
RNF4-211ENST00000509206 PSMB6P28072 239 aa2.71□□□□□ -1.98
RNF4-211ENST00000509206 CEACAM6P40199 344 aa2.71□□□□□ -1.98
RNF4-211ENST00000509206 MNAT1P51948 309 aa2.71□□□□□ -1.98
RNF4-211ENST00000509206 DAD1P61803 113 aa2.71□□□□□ -1.98
RNF4-211ENST00000509206 NUTF2P61970 127 aaKnown RBP2.71□□□□□ -1.98
RNF4-211ENST00000509206 SNRPGP62308 76 aaKnown RBP2.71□□□□□ -1.98
RNF4-211ENST00000509206 VSNL1P62760 191 aa2.71□□□□□ -1.98
RNF4-211ENST00000509206 TPBGQ13641 420 aa2.71□□□□□ -1.98
RNF4-211ENST00000509206 PRSS8Q16651 343 aa2.71□□□□□ -1.98
RNF4-211ENST00000509206 RTL8BQ17RB0 113 aa2.71□□□□□ -1.98
RNF4-211ENST00000509206 TNFAIP8L3Q5GJ75 292 aa2.71□□□□□ -1.98
RNF4-211ENST00000509206 SUMO4Q6EEV6 95 aa2.71□□□□□ -1.98
RNF4-211ENST00000509206 RAB12Q6IQ22 244 aa2.71□□□□□ -1.98
RNF4-211ENST00000509206 ZNF554Q86TJ5 538 aa2.71□□□□□ -1.98
RNF4-211ENST00000509206 PRSS35Q8N3Z0 413 aa2.71□□□□□ -1.98
RNF4-211ENST00000509206 ZNF383Q8NA42 475 aa2.71□□□□□ -1.98
RNF4-211ENST00000509206 TEX45Q8NA69 505 aa2.71□□□□□ -1.98
RNF4-211ENST00000509206 TMEM116Q8NCL8 245 aa2.71□□□□□ -1.98
RNF4-211ENST00000509206 OR10H4Q8NGA5 316 aa2.71□□□□□ -1.98
RNF4-211ENST00000509206 OR51A2Q8NGJ7 313 aa2.71□□□□□ -1.98
RNF4-211ENST00000509206 GIPC3Q8TF64 312 aa2.71□□□□□ -1.98
RNF4-211ENST00000509206 GGHQ92820 318 aa2.71□□□□□ -1.98
RNF4-211ENST00000509206 NIPSNAP1Q9BPW8 284 aa2.71□□□□□ -1.98
RNF4-211ENST00000509206 SIKE1Q9BRV8 207 aa2.71□□□□□ -1.98
RNF4-211ENST00000509206 DCUN1D5Q9BTE7 237 aa2.71□□□□□ -1.98
RNF4-211ENST00000509206 THTPAQ9BU02 230 aa2.71□□□□□ -1.98
RNF4-211ENST00000509206 CENPOQ9BU64 300 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms