RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 PUSL1Q8N0Z8 303 aaKnown RBP5.59□□□□□ -1.51
TOPBP1-207ENST00000509162 SMIM4Q8WVI0 70 aa5.59□□□□□ -1.51
TOPBP1-207ENST00000509162 GIMAP1Q8WWP7 306 aa5.59□□□□□ -1.51
TOPBP1-207ENST00000509162 ZNF414Q96IQ9 312 aa5.59□□□□□ -1.51
TOPBP1-207ENST00000509162 P2RX4Q99571 388 aa5.59□□□□□ -1.51
TOPBP1-207ENST00000509162 SDHCQ99643 169 aaPredicted RBP5.59□□□□□ -1.51
TOPBP1-207ENST00000509162 RASL11BQ9BPW5 248 aa5.59□□□□□ -1.51
TOPBP1-207ENST00000509162 ZNF2Q9BSG1 426 aaPredicted RBP5.59□□□□□ -1.51
TOPBP1-207ENST00000509162 SLC5A7Q9GZV3 580 aa5.59□□□□□ -1.51
TOPBP1-207ENST00000509162 SCPEP1Q9HB40 452 aa5.59□□□□□ -1.51
TOPBP1-207ENST00000509162 IFT46Q9NQC8 304 aa5.59□□□□□ -1.51
TOPBP1-207ENST00000509162 MTFP1Q9UDX5 166 aa5.59□□□□□ -1.51
TOPBP1-207ENST00000509162 NUBP2Q9Y5Y2 271 aa5.59□□□□□ -1.51
TOPBP1-207ENST00000509162 A3GALT2U3KPV4 340 aa5.59□□□□□ -1.51
TOPBP1-207ENST00000509162 DYNC2H1Q8NCM8 4307 aaKnown RBP5.59□□□□□ -1.52
TOPBP1-207ENST00000509162 KMT2CQ8NEZ4 4911 aaKnown RBP5.58□□□□□ -1.52
TOPBP1-207ENST00000509162 STARD9Q9P2P6 4700 aa5.58□□□□□ -1.52
TOPBP1-207ENST00000509162 RYR3Q15413 4870 aa5.58□□□□□ -1.52
TOPBP1-207ENST00000509162 TRAV41A0A0B4J266 112 aa5.58□□□□□ -1.52
TOPBP1-207ENST00000509162 DPPA5A6NC42 116 aa5.58□□□□□ -1.52
TOPBP1-207ENST00000509162 M0QZ24 198 aa5.58□□□□□ -1.52
TOPBP1-207ENST00000509162 SULT1C2O00338 296 aa5.58□□□□□ -1.52
TOPBP1-207ENST00000509162 APOA2P02652 100 aa5.58□□□□□ -1.52
TOPBP1-207ENST00000509162 OPN1MWP04001 364 aa5.58□□□□□ -1.52
TOPBP1-207ENST00000509162 RLN1P04808 185 aa5.58□□□□□ -1.52
TOPBP1-207ENST00000509162 CTXN2P0C2S0 81 aa5.58□□□□□ -1.52
TOPBP1-207ENST00000509162 APELAP0DMC3 54 aa5.58□□□□□ -1.52
TOPBP1-207ENST00000509162 OPN1MW2P0DN77 364 aa5.58□□□□□ -1.52
TOPBP1-207ENST00000509162 OPN1MW3P0DN78 364 aa5.58□□□□□ -1.52
TOPBP1-207ENST00000509162 PI3P19957 117 aa5.58□□□□□ -1.52
TOPBP1-207ENST00000509162 MALP21145 153 aa5.58□□□□□ -1.52
TOPBP1-207ENST00000509162 TNFSF8P32971 234 aa5.58□□□□□ -1.52
TOPBP1-207ENST00000509162 MC5RP33032 325 aa5.58□□□□□ -1.52
TOPBP1-207ENST00000509162 UBE2KP61086 200 aa5.58□□□□□ -1.52
TOPBP1-207ENST00000509162 ZNF45Q02386 682 aa5.58□□□□□ -1.52
TOPBP1-207ENST00000509162 FOXE3Q13461 319 aa5.58□□□□□ -1.52
TOPBP1-207ENST00000509162 PRSS8Q16651 343 aa5.58□□□□□ -1.52
TOPBP1-207ENST00000509162 KPRPQ5T749 579 aaPredicted RBP5.58□□□□□ -1.52
TOPBP1-207ENST00000509162 DHRS11Q6UWP2 260 aa5.58□□□□□ -1.52
TOPBP1-207ENST00000509162 CCDC190Q86UF4 302 aa5.58□□□□□ -1.52
TOPBP1-207ENST00000509162 OR4X2Q8NGF9 303 aa5.58□□□□□ -1.52
TOPBP1-207ENST00000509162 OR13C8Q8NGS7 320 aa5.58□□□□□ -1.52
TOPBP1-207ENST00000509162 OR5H2Q8NGV7 314 aa5.58□□□□□ -1.52
TOPBP1-207ENST00000509162 OR51H1Q8NH63 302 aa5.58□□□□□ -1.52
TOPBP1-207ENST00000509162 GRPEL2Q8TAA5 225 aa5.58□□□□□ -1.52
TOPBP1-207ENST00000509162 CHPT1Q8WUD6 406 aa5.58□□□□□ -1.52
TOPBP1-207ENST00000509162 TCTEX1D2Q8WW35 142 aa5.58□□□□□ -1.52
TOPBP1-207ENST00000509162 AP3S1Q92572 193 aa5.58□□□□□ -1.52
TOPBP1-207ENST00000509162 ARPC1AQ92747 370 aa5.58□□□□□ -1.52
TOPBP1-207ENST00000509162 C6orf62Q9GZU0 229 aaPredicted RBP5.58□□□□□ -1.52
TOPBP1-207ENST00000509162 GHITMQ9H3K2 345 aa5.58□□□□□ -1.52
TOPBP1-207ENST00000509162 ZNF430Q9H8G1 570 aaPredicted RBP5.58□□□□□ -1.52
TOPBP1-207ENST00000509162 RSL24D1Q9UHA3 163 aaKnown RBP5.58□□□□□ -1.52
TOPBP1-207ENST00000509162 DMRT1Q9Y5R6 373 aa5.58□□□□□ -1.52
TOPBP1-207ENST00000509162 TSSC4Q9Y5U2 329 aaPredicted RBP5.58□□□□□ -1.52
TOPBP1-207ENST00000509162 PLECQ15149 4684 aaKnown RBP5.57□□□□□ -1.52
TOPBP1-207ENST00000509162 RYR2Q92736 4967 aa5.57□□□□□ -1.52
TOPBP1-207ENST00000509162 A0A0G2JRQ6 117 aa5.57□□□□□ -1.52
TOPBP1-207ENST00000509162 A0A1W2PN81 502 aa5.57□□□□□ -1.52
TOPBP1-207ENST00000509162 TCRBV4S1A1TA0A5B7 111 aa5.57□□□□□ -1.52
TOPBP1-207ENST00000509162 I3L521 148 aa5.57□□□□□ -1.52
TOPBP1-207ENST00000509162 CTDSPLO15194 276 aa5.57□□□□□ -1.52
TOPBP1-207ENST00000509162 PGLYRP1O75594 196 aaPredicted RBP5.57□□□□□ -1.52
TOPBP1-207ENST00000509162 TRBV12-3P01733 135 aa5.57□□□□□ -1.52
TOPBP1-207ENST00000509162 PRB2P02812 416 aaPredicted RBP5.57□□□□□ -1.52
TOPBP1-207ENST00000509162 RPA2P15927 270 aa5.57□□□□□ -1.52
TOPBP1-207ENST00000509162 CHRNA7P36544 502 aa5.57□□□□□ -1.52
TOPBP1-207ENST00000509162 PPP5CP53041 499 aa5.57□□□□□ -1.52
TOPBP1-207ENST00000509162 TAS2R46P59540 309 aa5.57□□□□□ -1.52
TOPBP1-207ENST00000509162 RPS16P62249 146 aaKnown RBP5.57□□□□□ -1.52
TOPBP1-207ENST00000509162 KLF9Q13886 244 aaPredicted RBP5.57□□□□□ -1.52
TOPBP1-207ENST00000509162 POU2AF1Q16633 256 aa5.57□□□□□ -1.52
TOPBP1-207ENST00000509162 MLANAQ16655 118 aa5.57□□□□□ -1.52
TOPBP1-207ENST00000509162 PHLDA2Q53GA4 152 aa5.57□□□□□ -1.52
TOPBP1-207ENST00000509162 KHDC1LQ5JSQ8 128 aa5.57□□□□□ -1.52
TOPBP1-207ENST00000509162 LIN54Q6MZP7 749 aa5.57□□□□□ -1.52
TOPBP1-207ENST00000509162 C11orf87Q6NUJ2 197 aa5.57□□□□□ -1.52
TOPBP1-207ENST00000509162 CENPVQ7Z7K6 275 aaPredicted RBP5.57□□□□□ -1.52
TOPBP1-207ENST00000509162 PPP1R27Q86WC6 154 aa5.57□□□□□ -1.52
TOPBP1-207ENST00000509162 FOXRED2Q8IWF2 684 aa5.57□□□□□ -1.52
TOPBP1-207ENST00000509162 ZNF491Q8N8L2 437 aa5.57□□□□□ -1.52
TOPBP1-207ENST00000509162 KLHL30-AS1Q8NEE0 82 aa5.57□□□□□ -1.52
TOPBP1-207ENST00000509162 LFNGQ8NES3 379 aa5.57□□□□□ -1.52
TOPBP1-207ENST00000509162 OR4C16Q8NGL9 310 aa5.57□□□□□ -1.52
TOPBP1-207ENST00000509162 MCFD2Q8NI22 146 aa5.57□□□□□ -1.52
TOPBP1-207ENST00000509162 TMEM167AQ8TBQ9 72 aa5.57□□□□□ -1.52
TOPBP1-207ENST00000509162 TMEM230Q96A57 120 aa5.57□□□□□ -1.52
TOPBP1-207ENST00000509162 FLYWCH2Q96CP2 140 aaKnown RBP5.57□□□□□ -1.52
TOPBP1-207ENST00000509162 R3HDM4Q96D70 268 aa5.57□□□□□ -1.52
TOPBP1-207ENST00000509162 ADTRPQ96IZ2 230 aa5.57□□□□□ -1.52
TOPBP1-207ENST00000509162 TSNAXQ99598 290 aaKnown RBP5.57□□□□□ -1.52
TOPBP1-207ENST00000509162 RNF5Q99942 180 aa5.57□□□□□ -1.52
TOPBP1-207ENST00000509162 DNAH1Q9P2D7 4330 aa5.56□□□□□ -1.52
TOPBP1-207ENST00000509162 ANKRD20A5PA0PJZ0 165 aa5.56□□□□□ -1.52
TOPBP1-207ENST00000509162 HMX3A6NHT5 357 aa5.56□□□□□ -1.52
TOPBP1-207ENST00000509162 GABARAPH6UMI1 98 aa5.56□□□□□ -1.52
TOPBP1-207ENST00000509162 ZNF701M0R085 212 aaPredicted RBP5.56□□□□□ -1.52
TOPBP1-207ENST00000509162 RGS5O15539 181 aa5.56□□□□□ -1.52
TOPBP1-207ENST00000509162 GSTZ1O43708 216 aaPredicted RBP5.56□□□□□ -1.52
TOPBP1-207ENST00000509162 KBTBD11O94819 623 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms