RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 RASL11AQ6T310 242 aa8.39□□□□□ -1.07
PDGFRA-207ENST00000509092 BPIFA4PQ86YQ2 179 aa8.39□□□□□ -1.07
PDGFRA-207ENST00000509092 SPACA3Q8IXA5 215 aa8.39□□□□□ -1.07
PDGFRA-207ENST00000509092 LMX1AQ8TE12 382 aa8.39□□□□□ -1.07
PDGFRA-207ENST00000509092 WIPF2Q8TF74 440 aaPredicted RBP8.39□□□□□ -1.07
PDGFRA-207ENST00000509092 ST8SIA1Q92185 356 aa8.39□□□□□ -1.07
PDGFRA-207ENST00000509092 MBD6Q96DN6 1003 aa8.39□□□□□ -1.07
PDGFRA-207ENST00000509092 PERPQ96FX8 193 aa8.39□□□□□ -1.07
PDGFRA-207ENST00000509092 ZNF331Q9NQX6 463 aaPredicted RBP8.39□□□□□ -1.07
PDGFRA-207ENST00000509092 ZNF391Q9UJN7 358 aa8.39□□□□□ -1.07
PDGFRA-207ENST00000509092 YTHDF2Q9Y5A9 579 aaKnown RBP8.39□□□□□ -1.07
PDGFRA-207ENST00000509092 NOTCH4Q99466 2003 aa8.39□□□□□ -1.07
PDGFRA-207ENST00000509092 SPAARA0A1B0GVQ0 90 aa8.38□□□□□ -1.07
PDGFRA-207ENST00000509092 IZUMO1RA6ND01 250 aa8.38□□□□□ -1.07
PDGFRA-207ENST00000509092 ZNF207O43670 478 aaKnown RBP8.38□□□□□ -1.07
PDGFRA-207ENST00000509092 STAG3L2P0CL84 134 aa8.38□□□□□ -1.07
PDGFRA-207ENST00000509092 COX8AP10176 69 aa8.38□□□□□ -1.07
PDGFRA-207ENST00000509092 TCL1AP56279 114 aa8.38□□□□□ -1.07
PDGFRA-207ENST00000509092 RAB31Q13636 194 aa8.38□□□□□ -1.07
PDGFRA-207ENST00000509092 GCSAMLQ5JQS6 135 aa8.38□□□□□ -1.07
PDGFRA-207ENST00000509092 ZNF788Q6ZQV5 615 aa8.38□□□□□ -1.07
PDGFRA-207ENST00000509092 FA2HQ7L5A8 372 aa8.38□□□□□ -1.07
PDGFRA-207ENST00000509092 Q8N7P7 452 aa8.38□□□□□ -1.07
PDGFRA-207ENST00000509092 GJC3Q8NFK1 279 aa8.38□□□□□ -1.07
PDGFRA-207ENST00000509092 KCNIP1Q9NZI2 227 aa8.38□□□□□ -1.07
PDGFRA-207ENST00000509092 OR2W1Q9Y3N9 320 aa8.38□□□□□ -1.07
PDGFRA-207ENST00000509092 SPCS1Q9Y6A9 102 aa8.38□□□□□ -1.07
PDGFRA-207ENST00000509092 SELENOKQ9Y6D0 94 aa8.38□□□□□ -1.07
PDGFRA-207ENST00000509092 ARHGEF17Q96PE2 2063 aaPredicted RBP8.38□□□□□ -1.07
PDGFRA-207ENST00000509092 REV3LO60673 3130 aa8.38□□□□□ -1.07
PDGFRA-207ENST00000509092 A0A1W2PPM0 123 aa8.38□□□□□ -1.07
PDGFRA-207ENST00000509092 FAM90A10PA6NDY2 464 aa8.38□□□□□ -1.07
PDGFRA-207ENST00000509092 FAM90A18PA6NE21 464 aa8.38□□□□□ -1.07
PDGFRA-207ENST00000509092 FAM90A16PA6NEW6 464 aa8.38□□□□□ -1.07
PDGFRA-207ENST00000509092 FAM90A20PA6NIJ5 464 aa8.38□□□□□ -1.07
PDGFRA-207ENST00000509092 FAM90A8PA6NJQ4 464 aa8.38□□□□□ -1.07
PDGFRA-207ENST00000509092 FAM90A7PA6NKC0 464 aa8.38□□□□□ -1.07
PDGFRA-207ENST00000509092 ANKRD30BLA7E2S9 258 aa8.38□□□□□ -1.07
PDGFRA-207ENST00000509092 FAM90A22PA8MWA6 464 aa8.38□□□□□ -1.07
PDGFRA-207ENST00000509092 FAM90A12PA8MX19 464 aa8.38□□□□□ -1.07
PDGFRA-207ENST00000509092 FAM90A5PA8MXJ8 464 aa8.38□□□□□ -1.07
PDGFRA-207ENST00000509092 FAM90A23PA8MXZ1 464 aa8.38□□□□□ -1.07
PDGFRA-207ENST00000509092 C5orf67F2Z3F1 127 aa8.38□□□□□ -1.07
PDGFRA-207ENST00000509092 M0R135 149 aa8.38□□□□□ -1.07
PDGFRA-207ENST00000509092 AGFG2O95081 481 aa8.38□□□□□ -1.07
PDGFRA-207ENST00000509092 HBZP02008 142 aa8.38□□□□□ -1.07
PDGFRA-207ENST00000509092 FAM90A15PP0C7V4 464 aa8.38□□□□□ -1.07
PDGFRA-207ENST00000509092 FAM90A13PP0C7W8 464 aa8.38□□□□□ -1.07
PDGFRA-207ENST00000509092 FAM90A14PP0C7W9 464 aa8.38□□□□□ -1.07
PDGFRA-207ENST00000509092 FAM90A24PP0C7X0 464 aa8.38□□□□□ -1.07
PDGFRA-207ENST00000509092 SP9P0CG40 484 aa8.38□□□□□ -1.07
PDGFRA-207ENST00000509092 MEF2CQ06413 473 aaPredicted RBP8.38□□□□□ -1.07
PDGFRA-207ENST00000509092 RSPO1Q2MKA7 263 aaPredicted RBP8.38□□□□□ -1.07
PDGFRA-207ENST00000509092 COLCA1Q6ZS62 124 aa8.38□□□□□ -1.07
PDGFRA-207ENST00000509092 C1orf122Q6ZSJ8 110 aa8.38□□□□□ -1.07
PDGFRA-207ENST00000509092 FOXL2NBQ6ZUU3 175 aa8.38□□□□□ -1.07
PDGFRA-207ENST00000509092 ZNF799Q96GE5 643 aa8.38□□□□□ -1.07
PDGFRA-207ENST00000509092 PLEK2Q9NYT0 353 aa8.38□□□□□ -1.07
PDGFRA-207ENST00000509092 COPS7AQ9UBW8 275 aa8.38□□□□□ -1.07
PDGFRA-207ENST00000509092 ATP23Q9Y6H3 246 aa8.38□□□□□ -1.07
PDGFRA-207ENST00000509092 SZT2Q5T011 3432 aa8.38□□□□□ -1.07
PDGFRA-207ENST00000509092 MED12LQ86YW9 2145 aa8.37□□□□□ -1.07
PDGFRA-207ENST00000509092 C2orf72A6NCS6 295 aa8.37□□□□□ -1.07
PDGFRA-207ENST00000509092 TSPAN13O95857 204 aa8.37□□□□□ -1.07
PDGFRA-207ENST00000509092 APOA2P02652 100 aa8.37□□□□□ -1.07
PDGFRA-207ENST00000509092 CYC1P08574 325 aa8.37□□□□□ -1.07
PDGFRA-207ENST00000509092 UQCRFS1P47985 274 aa8.37□□□□□ -1.07
PDGFRA-207ENST00000509092 GNG4P50150 75 aa8.37□□□□□ -1.07
PDGFRA-207ENST00000509092 SLC23A3Q6PIS1 610 aa8.37□□□□□ -1.07
PDGFRA-207ENST00000509092 PCSK4Q6UW60 755 aa8.37□□□□□ -1.07
PDGFRA-207ENST00000509092 Q6ZSR6 202 aa8.37□□□□□ -1.07
PDGFRA-207ENST00000509092 SFTPA1Q8IWL2 248 aa8.37□□□□□ -1.07
PDGFRA-207ENST00000509092 TMEM251Q8N6I4 163 aa8.37□□□□□ -1.07
PDGFRA-207ENST00000509092 LIN7CQ9NUP9 197 aaKnown RBP8.37□□□□□ -1.07
PDGFRA-207ENST00000509092 PGPEP1Q9NXJ5 209 aa8.37□□□□□ -1.07
PDGFRA-207ENST00000509092 EXPH5Q8NEV8 1989 aa8.37□□□□□ -1.07
PDGFRA-207ENST00000509092 J3QR89 54 aa8.37□□□□□ -1.07
PDGFRA-207ENST00000509092 ISLRO14498 428 aa8.37□□□□□ -1.07
PDGFRA-207ENST00000509092 RRHO14718 337 aa8.37□□□□□ -1.07
PDGFRA-207ENST00000509092 TNFSF11O14788 317 aa8.37□□□□□ -1.07
PDGFRA-207ENST00000509092 IGKV3-11P04433 115 aa8.37□□□□□ -1.07
PDGFRA-207ENST00000509092 CCNOP22674 350 aa8.37□□□□□ -1.07
PDGFRA-207ENST00000509092 FXYD3Q14802 87 aa8.37□□□□□ -1.07
PDGFRA-207ENST00000509092 KIR3DS1Q14943 382 aa8.37□□□□□ -1.07
PDGFRA-207ENST00000509092 ZNF585BQ52M93 769 aa8.37□□□□□ -1.07
PDGFRA-207ENST00000509092 CENPWQ5EE01 88 aa8.37□□□□□ -1.07
PDGFRA-207ENST00000509092 HLA-DQA1Q5Y7H0 255 aa8.37□□□□□ -1.07
PDGFRA-207ENST00000509092 FOXI2Q6ZQN5 318 aa8.37□□□□□ -1.07
PDGFRA-207ENST00000509092 SHISA6Q6ZSJ9 500 aa8.37□□□□□ -1.07
PDGFRA-207ENST00000509092 RD3Q7Z3Z2 195 aa8.37□□□□□ -1.07
PDGFRA-207ENST00000509092 TDHQ8IZJ6 230 aa8.37□□□□□ -1.07
PDGFRA-207ENST00000509092 CCL4L1Q8NHW4 92 aa8.37□□□□□ -1.07
PDGFRA-207ENST00000509092 BLNKQ8WV28 456 aa8.37□□□□□ -1.07
PDGFRA-207ENST00000509092 LINC00470Q9BZP3 86 aa8.37□□□□□ -1.07
PDGFRA-207ENST00000509092 RNASE7Q9H1E1 156 aaKnown RBP8.37□□□□□ -1.07
PDGFRA-207ENST00000509092 CLCF1Q9UBD9 225 aa8.37□□□□□ -1.07
PDGFRA-207ENST00000509092 C2orf16Q68DN1 1984 aa8.36□□□□□ -1.07
PDGFRA-207ENST00000509092 PCDH15Q96QU1 1955 aa8.36□□□□□ -1.07
PDGFRA-207ENST00000509092 SLC31A1O15431 190 aa8.36□□□□□ -1.07
PDGFRA-207ENST00000509092 CLDN14O95500 239 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms