RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 EHFQ9NZC4 300 aa11.35□□□□□ -0.59
UBE2D3-228ENST00000508974 COMMD3Q9UBI1 195 aa11.35□□□□□ -0.59
UBE2D3-228ENST00000508974 PEF1Q9UBV8 284 aaKnown RBP11.35□□□□□ -0.59
UBE2D3-228ENST00000508974 PMP2P02689 132 aa11.34□□□□□ -0.59
UBE2D3-228ENST00000508974 EIF4EP06730 217 aaKnown RBP11.34□□□□□ -0.59
UBE2D3-228ENST00000508974 RFX2P48378 723 aa11.34□□□□□ -0.59
UBE2D3-228ENST00000508974 HERV-K104P61576 105 aa11.34□□□□□ -0.59
UBE2D3-228ENST00000508974 EXOSC2Q13868 293 aaKnown RBP11.34□□□□□ -0.59
UBE2D3-228ENST00000508974 ZNF343Q6P1L6 599 aa11.34□□□□□ -0.59
UBE2D3-228ENST00000508974 ZNF818PQ6ZRF7 136 aa11.34□□□□□ -0.59
UBE2D3-228ENST00000508974 ANKRD13BQ86YJ7 626 aa11.34□□□□□ -0.59
UBE2D3-228ENST00000508974 OR51H1Q8NH63 302 aa11.34□□□□□ -0.59
UBE2D3-228ENST00000508974 VSTM2AQ8TAG5 236 aa11.34□□□□□ -0.59
UBE2D3-228ENST00000508974 SLC25A46Q96AG3 418 aa11.34□□□□□ -0.59
UBE2D3-228ENST00000508974 USMG5Q96IX5 58 aa11.34□□□□□ -0.59
UBE2D3-228ENST00000508974 SMAD5-AS1Q9Y6J3 95 aa11.34□□□□□ -0.59
UBE2D3-228ENST00000508974 DPPA5A6NC42 116 aa11.33□□□□□ -0.6
UBE2D3-228ENST00000508974 TRIM64CA6NLI5 447 aa11.33□□□□□ -0.6
UBE2D3-228ENST00000508974 TEX22C9J3V5 150 aa11.33□□□□□ -0.6
UBE2D3-228ENST00000508974 E7EUB6 86 aa11.33□□□□□ -0.6
UBE2D3-228ENST00000508974 TMEM127O75204 238 aa11.33□□□□□ -0.6
UBE2D3-228ENST00000508974 OR2J3O76001 311 aa11.33□□□□□ -0.6
UBE2D3-228ENST00000508974 HRASP01112 189 aa11.33□□□□□ -0.6
UBE2D3-228ENST00000508974 RPA2P15927 270 aa11.33□□□□□ -0.6
UBE2D3-228ENST00000508974 KIR2DS2P43631 304 aa11.33□□□□□ -0.6
UBE2D3-228ENST00000508974 RPL27AP46776 148 aaKnown RBP11.33□□□□□ -0.6
UBE2D3-228ENST00000508974 ATP5G2Q06055 141 aa11.33□□□□□ -0.6
UBE2D3-228ENST00000508974 KLF5Q13887 457 aaPredicted RBP11.33□□□□□ -0.6
UBE2D3-228ENST00000508974 RPEL1Q2QD12 228 aa11.33□□□□□ -0.6
UBE2D3-228ENST00000508974 AADACL3Q5VUY0 350 aa11.33□□□□□ -0.6
UBE2D3-228ENST00000508974 PUSL1Q8N0Z8 303 aaKnown RBP11.33□□□□□ -0.6
UBE2D3-228ENST00000508974 TMEM167AQ8TBQ9 72 aa11.33□□□□□ -0.6
UBE2D3-228ENST00000508974 HRASLSQ9HDD0 168 aa11.33□□□□□ -0.6
UBE2D3-228ENST00000508974 A0A1B0GW64 132 aa11.32□□□□□ -0.6
UBE2D3-228ENST00000508974 BRI3O95415 125 aa11.32□□□□□ -0.6
UBE2D3-228ENST00000508974 IGHV3-23P01764 117 aa11.32□□□□□ -0.6
UBE2D3-228ENST00000508974 REG1AP05451 166 aa11.32□□□□□ -0.6
UBE2D3-228ENST00000508974 IL6RP08887 468 aaPredicted RBP11.32□□□□□ -0.6
UBE2D3-228ENST00000508974 AREGP15514 252 aa11.32□□□□□ -0.6
UBE2D3-228ENST00000508974 PRSS3P35030 304 aa11.32□□□□□ -0.6
UBE2D3-228ENST00000508974 SMCPP49901 116 aaPredicted RBP11.32□□□□□ -0.6
UBE2D3-228ENST00000508974 CATR1Q13166 79 aa11.32□□□□□ -0.6
UBE2D3-228ENST00000508974 OR4A47Q6IF82 309 aa11.32□□□□□ -0.6
UBE2D3-228ENST00000508974 TTC9CQ8N5M4 171 aa11.32□□□□□ -0.6
UBE2D3-228ENST00000508974 OR9G4Q8NGQ1 327 aa11.32□□□□□ -0.6
UBE2D3-228ENST00000508974 OR5H2Q8NGV7 314 aa11.32□□□□□ -0.6
UBE2D3-228ENST00000508974 GIMAP1Q8WWP7 306 aa11.32□□□□□ -0.6
UBE2D3-228ENST00000508974 ZNF2Q9BSG1 426 aaPredicted RBP11.32□□□□□ -0.6
UBE2D3-228ENST00000508974 NAA50Q9GZZ1 169 aaKnown RBP11.32□□□□□ -0.6
UBE2D3-228ENST00000508974 S4R3C0 116 aa11.32□□□□□ -0.6
UBE2D3-228ENST00000508974 FAM223BA6NKX1 122 aa11.31□□□□□ -0.6
UBE2D3-228ENST00000508974 PPP5D1E7EU14 171 aa11.31□□□□□ -0.6
UBE2D3-228ENST00000508974 RLN1P04808 185 aa11.31□□□□□ -0.6
UBE2D3-228ENST00000508974 HLA-DMAP28067 261 aa11.31□□□□□ -0.6
UBE2D3-228ENST00000508974 RPL8P62917 257 aaKnown RBP11.31□□□□□ -0.6
UBE2D3-228ENST00000508974 MSMO1Q15800 293 aa11.31□□□□□ -0.6
UBE2D3-228ENST00000508974 C15orf32Q32M92 178 aa11.31□□□□□ -0.6
UBE2D3-228ENST00000508974 RNASE12Q5GAN4 147 aaKnown RBP11.31□□□□□ -0.6
UBE2D3-228ENST00000508974 SNX29P2Q8IUI4 249 aa11.31□□□□□ -0.6
UBE2D3-228ENST00000508974 FAM223AQ8IWN6 122 aa11.31□□□□□ -0.6
UBE2D3-228ENST00000508974 ZBTB34Q8NCN2 500 aa11.31□□□□□ -0.6
UBE2D3-228ENST00000508974 U3KQK5 164 aa11.31□□□□□ -0.6
UBE2D3-228ENST00000508974 TRBV9A0A0B4J1U6 114 aa11.3□□□□□ -0.6
UBE2D3-228ENST00000508974 TRAV3A0A0B4J244 114 aa11.3□□□□□ -0.6
UBE2D3-228ENST00000508974 BMPR1BO00238 502 aa11.3□□□□□ -0.6
UBE2D3-228ENST00000508974 HPGDSO60760 199 aa11.3□□□□□ -0.6
UBE2D3-228ENST00000508974 S1PR2O95136 353 aa11.3□□□□□ -0.6
UBE2D3-228ENST00000508974 IGLV1-51P01701 117 aa11.3□□□□□ -0.6
UBE2D3-228ENST00000508974 HLA-AP01891 365 aaKnown RBP11.3□□□□□ -0.6
UBE2D3-228ENST00000508974 FRMD6-AS1P0C7T7 363 aa11.3□□□□□ -0.6
UBE2D3-228ENST00000508974 NHLRC4P0CG21 123 aaPredicted RBP11.3□□□□□ -0.6
UBE2D3-228ENST00000508974 SMIM18P0DKX4 95 aa11.3□□□□□ -0.6
UBE2D3-228ENST00000508974 HLA-GP17693 338 aa11.3□□□□□ -0.6
UBE2D3-228ENST00000508974 ELK1P19419 428 aa11.3□□□□□ -0.6
UBE2D3-228ENST00000508974 GNRHRP30968 328 aa11.3□□□□□ -0.6
UBE2D3-228ENST00000508974 HRH1P35367 487 aa11.3□□□□□ -0.6
UBE2D3-228ENST00000508974 SLC25A42Q86VD7 318 aa11.3□□□□□ -0.6
UBE2D3-228ENST00000508974 NECAP1Q8NC96 275 aa11.3□□□□□ -0.6
UBE2D3-228ENST00000508974 DMBX1Q8NFW5 382 aa11.3□□□□□ -0.6
UBE2D3-228ENST00000508974 FXYD6Q9H0Q3 95 aa11.3□□□□□ -0.6
UBE2D3-228ENST00000508974 FBXL7Q9UJT9 491 aa11.3□□□□□ -0.6
UBE2D3-228ENST00000508974 ANAPC10Q9UM13 185 aa11.3□□□□□ -0.6
UBE2D3-228ENST00000508974 ZNF257Q9Y2Q1 563 aa11.3□□□□□ -0.6
UBE2D3-228ENST00000508974 SMIM31A0A1B0GVY4 71 aa11.29□□□□□ -0.6
UBE2D3-228ENST00000508974 CGB1A6NKQ9 187 aa11.29□□□□□ -0.6
UBE2D3-228ENST00000508974 HPRT1P00492 218 aa11.29□□□□□ -0.6
UBE2D3-228ENST00000508974 ZNF735P0CB33 412 aa11.29□□□□□ -0.6
UBE2D3-228ENST00000508974 MAS1LP35410 378 aa11.29□□□□□ -0.6
UBE2D3-228ENST00000508974 TAS2R46P59540 309 aa11.29□□□□□ -0.6
UBE2D3-228ENST00000508974 TATDN3Q17R31 274 aa11.29□□□□□ -0.6
UBE2D3-228ENST00000508974 IL34Q6ZMJ4 242 aa11.29□□□□□ -0.6
UBE2D3-228ENST00000508974 SBSPONQ8IVN8 264 aa11.29□□□□□ -0.6
UBE2D3-228ENST00000508974 MOB3AQ96BX8 217 aa11.29□□□□□ -0.6
UBE2D3-228ENST00000508974 WWC2-AS2Q96NR7 200 aa11.29□□□□□ -0.6
UBE2D3-228ENST00000508974 SLC2A9Q9NRM0 540 aa11.29□□□□□ -0.6
UBE2D3-228ENST00000508974 TMEM140Q9NV12 185 aa11.29□□□□□ -0.6
UBE2D3-228ENST00000508974 BET1LQ9NYM9 111 aa11.29□□□□□ -0.6
UBE2D3-228ENST00000508974 NPIPB5A8MRT5 1133 aa11.28□□□□□ -0.6
UBE2D3-228ENST00000508974 FAM25AB3EWG3 89 aa11.28□□□□□ -0.6
UBE2D3-228ENST00000508974 FAM25CB3EWG5 89 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms