RNA–Protein interactions for RNA: ENST00000508499.5

USP46-207, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2 BASIC

Gene USP46, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-207ENST00000508499 COQ8AQ8NI60 647 aa6.88□□□□□ -1.31
USP46-207ENST00000508499 TMEM167AQ8TBQ9 72 aa6.88□□□□□ -1.31
USP46-207ENST00000508499 HARBI1Q96MB7 349 aa6.88□□□□□ -1.31
USP46-207ENST00000508499 PHB2Q99623 299 aa6.88□□□□□ -1.31
USP46-207ENST00000508499 SLC25A33Q9BSK2 321 aa6.88□□□□□ -1.31
USP46-207ENST00000508499 SIGLEC9Q9Y336 463 aa6.88□□□□□ -1.31
USP46-207ENST00000508499 TMED3Q9Y3Q3 217 aa6.88□□□□□ -1.31
USP46-207ENST00000508499 MMP24Q9Y5R2 645 aa6.88□□□□□ -1.31
USP46-207ENST00000508499 CUBNO60494 3623 aa6.87□□□□□ -1.31
USP46-207ENST00000508499 TET2Q6N021 2002 aaPredicted RBP6.87□□□□□ -1.31
USP46-207ENST00000508499 IGHV3-72A0A0B4J1Y9 119 aa6.87□□□□□ -1.31
USP46-207ENST00000508499 A0A0B4J293 547 aa6.87□□□□□ -1.31
USP46-207ENST00000508499 DNAJC9-AS1A6NH13 148 aa6.87□□□□□ -1.31
USP46-207ENST00000508499 KBTBD11O94819 623 aa6.87□□□□□ -1.31
USP46-207ENST00000508499 OR2A4O95047 310 aa6.87□□□□□ -1.31
USP46-207ENST00000508499 S1PR2O95136 353 aa6.87□□□□□ -1.31
USP46-207ENST00000508499 AMY1AP04745 511 aa6.87□□□□□ -1.31
USP46-207ENST00000508499 SPNP16150 400 aa6.87□□□□□ -1.31
USP46-207ENST00000508499 PAX6P26367 422 aa6.87□□□□□ -1.31
USP46-207ENST00000508499 CRIP2P52943 208 aaPredicted RBP6.87□□□□□ -1.31
USP46-207ENST00000508499 RPS16P62249 146 aaKnown RBP6.87□□□□□ -1.31
USP46-207ENST00000508499 HES1Q14469 280 aa6.87□□□□□ -1.31
USP46-207ENST00000508499 MMDQ15546 238 aa6.87□□□□□ -1.31
USP46-207ENST00000508499 TATDN3Q17R31 274 aa6.87□□□□□ -1.31
USP46-207ENST00000508499 C5orf64Q2M2E5 130 aa6.87□□□□□ -1.31
USP46-207ENST00000508499 MRGPRG-AS1Q2M3A8 158 aa6.87□□□□□ -1.31
USP46-207ENST00000508499 ANKRD55Q3KP44 614 aa6.87□□□□□ -1.31
USP46-207ENST00000508499 VMA21Q3ZAQ7 101 aa6.87□□□□□ -1.31
USP46-207ENST00000508499 FBLN7Q53RD9 439 aa6.87□□□□□ -1.31
USP46-207ENST00000508499 NMSQ5H8A3 153 aa6.87□□□□□ -1.31
USP46-207ENST00000508499 THOC7Q6I9Y2 204 aaKnown RBP6.87□□□□□ -1.31
USP46-207ENST00000508499 OR4A47Q6IF82 309 aa6.87□□□□□ -1.31
USP46-207ENST00000508499 PPP1R27Q86WC6 154 aa6.87□□□□□ -1.31
USP46-207ENST00000508499 FOXRED2Q8IWF2 684 aa6.87□□□□□ -1.31
USP46-207ENST00000508499 SELENOHQ8IZQ5 122 aaKnown RBP6.87□□□□□ -1.31
USP46-207ENST00000508499 C5orf56Q8N8D9 126 aa6.87□□□□□ -1.31
USP46-207ENST00000508499 Q8N9W7 124 aa6.87□□□□□ -1.31
USP46-207ENST00000508499 LHFPL5Q8TAF8 219 aa6.87□□□□□ -1.31
USP46-207ENST00000508499 R3HDM4Q96D70 268 aa6.87□□□□□ -1.31
USP46-207ENST00000508499 RITA1Q96K30 269 aa6.87□□□□□ -1.31
USP46-207ENST00000508499 OR2A7Q96R45 310 aa6.87□□□□□ -1.31
USP46-207ENST00000508499 CHIAQ9BZP6 476 aa6.87□□□□□ -1.31
USP46-207ENST00000508499 ESM1Q9NQ30 184 aa6.87□□□□□ -1.31
USP46-207ENST00000508499 KIAA1456Q9P272 454 aa6.87□□□□□ -1.31
USP46-207ENST00000508499 ZNF257Q9Y2Q1 563 aa6.87□□□□□ -1.31
USP46-207ENST00000508499 TNCP24821 2201 aa6.87□□□□□ -1.31
USP46-207ENST00000508499 ANK3Q12955 4377 aaKnown RBP6.87□□□□□ -1.31
USP46-207ENST00000508499 KRTAP4-8A0A0G2JLE6 195 aa6.86□□□□□ -1.31
USP46-207ENST00000508499 CHST1O43916 411 aa6.86□□□□□ -1.31
USP46-207ENST00000508499 IGKV1-5P01602 117 aa6.86□□□□□ -1.31
USP46-207ENST00000508499 SAA1P0DJI8 122 aaPredicted RBP6.86□□□□□ -1.31
USP46-207ENST00000508499 F2RL1P55085 397 aa6.86□□□□□ -1.31
USP46-207ENST00000508499 RAB25P57735 213 aa6.86□□□□□ -1.31
USP46-207ENST00000508499 ERVK-16P61578 105 aa6.86□□□□□ -1.31
USP46-207ENST00000508499 UBA52P62987 128 aaKnown RBP6.86□□□□□ -1.31
USP46-207ENST00000508499 SP6Q3SY56 376 aa6.86□□□□□ -1.31
USP46-207ENST00000508499 TMEM268Q5VZI3 342 aa6.86□□□□□ -1.31
USP46-207ENST00000508499 ZNF562Q6V9R5 426 aa6.86□□□□□ -1.31
USP46-207ENST00000508499 ZNF695Q8IW36 515 aa6.86□□□□□ -1.31
USP46-207ENST00000508499 MMD2Q8IY49 270 aa6.86□□□□□ -1.31
USP46-207ENST00000508499 SLC35G3Q8N808 338 aa6.86□□□□□ -1.31
USP46-207ENST00000508499 OR52E5Q8NH55 327 aa6.86□□□□□ -1.31
USP46-207ENST00000508499 SRSF8Q9BRL6 282 aaKnown RBP6.86□□□□□ -1.31
USP46-207ENST00000508499 NPFFR1Q9GZQ6 430 aa6.86□□□□□ -1.31
USP46-207ENST00000508499 TMEM14BQ9NUH8 114 aa6.86□□□□□ -1.31
USP46-207ENST00000508499 TMEM140Q9NV12 185 aa6.86□□□□□ -1.31
USP46-207ENST00000508499 FKBP11Q9NYL4 201 aa6.86□□□□□ -1.31
USP46-207ENST00000508499 A0A1B0GU03 582 aa6.85□□□□□ -1.31
USP46-207ENST00000508499 INS-IGF2F8WCM5 200 aa6.85□□□□□ -1.31
USP46-207ENST00000508499 TRIM77I1YAP6 450 aa6.85□□□□□ -1.31
USP46-207ENST00000508499 UPK2O00526 184 aa6.85□□□□□ -1.31
USP46-207ENST00000508499 KCNAB3O43448 404 aa6.85□□□□□ -1.31
USP46-207ENST00000508499 GPR137BO60478 399 aa6.85□□□□□ -1.31
USP46-207ENST00000508499 TSPAN9O75954 239 aa6.85□□□□□ -1.31
USP46-207ENST00000508499 KRASP01116 189 aa6.85□□□□□ -1.31
USP46-207ENST00000508499 IGHG2P01859 326 aa6.85□□□□□ -1.31
USP46-207ENST00000508499 IGF1P05019 195 aa6.85□□□□□ -1.31
USP46-207ENST00000508499 HNRNPCP07910 306 aaKnown RBP eCLIP6.85□□□□□ -1.31
USP46-207ENST00000508499 CD24P25063 80 aa6.85□□□□□ -1.31
USP46-207ENST00000508499 SSBP2P81877 361 aaPredicted RBP6.85□□□□□ -1.31
USP46-207ENST00000508499 PRSS8Q16651 343 aa6.85□□□□□ -1.31
USP46-207ENST00000508499 OR2B11Q5JQS5 317 aa6.85□□□□□ -1.31
USP46-207ENST00000508499 LIN54Q6MZP7 749 aa6.85□□□□□ -1.31
USP46-207ENST00000508499 Q6ZNX1 250 aa6.85□□□□□ -1.31
USP46-207ENST00000508499 C12orf45Q8N5I9 185 aaPredicted RBP6.85□□□□□ -1.31
USP46-207ENST00000508499 OR5B3Q8NH48 314 aa6.85□□□□□ -1.31
USP46-207ENST00000508499 ASB13Q8WXK3 278 aa6.85□□□□□ -1.31
USP46-207ENST00000508499 RRNAD1Q96FB5 475 aaKnown RBP6.85□□□□□ -1.31
USP46-207ENST00000508499 C16orf95Q9H693 158 aa6.85□□□□□ -1.31
USP46-207ENST00000508499 METTL1Q9UBP6 276 aaKnown RBP6.85□□□□□ -1.31
USP46-207ENST00000508499 FOXA2Q9Y261 457 aaPredicted RBP6.85□□□□□ -1.31
USP46-207ENST00000508499 NF1P21359 2839 aa6.85□□□□□ -1.31
USP46-207ENST00000508499 C15orf61A6NNL5 157 aa6.84□□□□□ -1.31
USP46-207ENST00000508499 FAM90A26D6RGX4 464 aa6.84□□□□□ -1.31
USP46-207ENST00000508499 SLC25A17O43808 307 aa6.84□□□□□ -1.31
USP46-207ENST00000508499 PITX3O75364 302 aa6.84□□□□□ -1.31
USP46-207ENST00000508499 NDUFA7O95182 113 aa6.84□□□□□ -1.31
USP46-207ENST00000508499 BRI3O95415 125 aa6.84□□□□□ -1.31
USP46-207ENST00000508499 CNTFRP26992 372 aa6.84□□□□□ -1.31
USP46-207ENST00000508499 G6PCP35575 357 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 332.7 ms