RNA–Protein interactions for RNA: ENST00000507906.5

USP53-204, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 4

Gene USP53, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-204ENST00000507906 A0A087WUJ7 227 aa1.84□□□□□ -2.11
USP53-204ENST00000507906 FUSP35637 526 aaKnown RBP eCLIP1.84□□□□□ -2.11
USP53-204ENST00000507906 OMPP47874 163 aa1.84□□□□□ -2.11
USP53-204ENST00000507906 GZMMP51124 257 aa1.84□□□□□ -2.11
USP53-204ENST00000507906 SRSF6Q13247 344 aaKnown RBP1.84□□□□□ -2.11
USP53-204ENST00000507906 LRRC25Q8N386 305 aaPredicted RBP1.84□□□□□ -2.11
USP53-204ENST00000507906 SMCR5Q8TEV8 140 aa1.84□□□□□ -2.11
USP53-204ENST00000507906 CHMP6Q96FZ7 201 aa1.84□□□□□ -2.11
USP53-204ENST00000507906 CNBD2Q96M20 576 aa1.84□□□□□ -2.11
USP53-204ENST00000507906 CISHQ9NSE2 258 aa1.84□□□□□ -2.11
USP53-204ENST00000507906 KDM5BQ9UGL1 1544 aa1.84□□□□□ -2.11
USP53-204ENST00000507906 FLT4P35916 1363 aa1.84□□□□□ -2.12
USP53-204ENST00000507906 DCCP43146 1447 aa1.83□□□□□ -2.12
USP53-204ENST00000507906 ATG2BQ96BY7 2078 aa1.83□□□□□ -2.12
USP53-204ENST00000507906 A0A0J9YY10 115 aa1.83□□□□□ -2.12
USP53-204ENST00000507906 TMEM269A0A1B0GVZ9 245 aa1.83□□□□□ -2.12
USP53-204ENST00000507906 A0A1B0GX78 115 aa1.83□□□□□ -2.12
USP53-204ENST00000507906 A0A1W2PQD3 144 aa1.83□□□□□ -2.12
USP53-204ENST00000507906 GRIFINA4D1Z8 144 aa1.83□□□□□ -2.12
USP53-204ENST00000507906 H3BPC8 53 aa1.83□□□□□ -2.12
USP53-204ENST00000507906 BHLHE40O14503 412 aa1.83□□□□□ -2.12
USP53-204ENST00000507906 GNRH2O43555 120 aa1.83□□□□□ -2.12
USP53-204ENST00000507906 FADS1O60427 444 aa1.83□□□□□ -2.12
USP53-204ENST00000507906 ATP5HO75947 161 aa1.83□□□□□ -2.12
USP53-204ENST00000507906 CCL5P13501 91 aa1.83□□□□□ -2.12
USP53-204ENST00000507906 GZMHP20718 246 aa1.83□□□□□ -2.12
USP53-204ENST00000507906 SLCO1A2P46721 670 aa1.83□□□□□ -2.12
USP53-204ENST00000507906 IDH3GP51553 393 aaPredicted RBP1.83□□□□□ -2.12
USP53-204ENST00000507906 FABP9Q0Z7S8 132 aa1.83□□□□□ -2.12
USP53-204ENST00000507906 ZNF181Q2M3W8 571 aa1.83□□□□□ -2.12
USP53-204ENST00000507906 SSX8Q7RTT4 187 aa1.83□□□□□ -2.12
USP53-204ENST00000507906 S100A7AQ86SG5 101 aa1.83□□□□□ -2.12
USP53-204ENST00000507906 ZNF283Q8N7M2 679 aa1.83□□□□□ -2.12
USP53-204ENST00000507906 ZNF675Q8TD23 568 aa1.83□□□□□ -2.12
USP53-204ENST00000507906 MIEN1Q9BRT3 115 aa1.83□□□□□ -2.12
USP53-204ENST00000507906 TUBA4BQ9H853 241 aa1.83□□□□□ -2.12
USP53-204ENST00000507906 TXNL4BQ9NX01 149 aaKnown RBP1.83□□□□□ -2.12
USP53-204ENST00000507906 MRPL27Q9P0M9 148 aaKnown RBP1.83□□□□□ -2.12
USP53-204ENST00000507906 TP73-AS1Q9UF72 201 aa1.83□□□□□ -2.12
USP53-204ENST00000507906 BAZ1AQ9NRL2 1556 aaPredicted RBP1.83□□□□□ -2.12
USP53-204ENST00000507906 SHROOM2Q13796 1616 aa1.83□□□□□ -2.12
USP53-204ENST00000507906 TCHHQ07283 1943 aa1.83□□□□□ -2.12
USP53-204ENST00000507906 E9PCH4 1651 aa1.83□□□□□ -2.12
USP53-204ENST00000507906 CFAP43Q8NDM7 1665 aa1.83□□□□□ -2.12
USP53-204ENST00000507906 SMG6Q86US8 1419 aaKnown RBP1.83□□□□□ -2.12
USP53-204ENST00000507906 RRBP1Q9P2E9 1410 aaKnown RBP1.83□□□□□ -2.12
USP53-204ENST00000507906 CCDC88BA6NC98 1476 aa1.82□□□□□ -2.12
USP53-204ENST00000507906 CEP164Q9UPV0 1460 aa1.82□□□□□ -2.12
USP53-204ENST00000507906 ERICH3Q5RHP9 1530 aa1.82□□□□□ -2.12
USP53-204ENST00000507906 PCF11O94913 1555 aaKnown RBP1.82□□□□□ -2.12
USP53-204ENST00000507906 IGKV1D-43A0A0B4J1Z2 117 aa1.82□□□□□ -2.12
USP53-204ENST00000507906 MUC21A0A0G2JKD1 596 aa1.82□□□□□ -2.12
USP53-204ENST00000507906 MUC21A0A140T8X8 626 aa1.82□□□□□ -2.12
USP53-204ENST00000507906 FAM236DA0A1B0GTK5 79 aa1.82□□□□□ -2.12
USP53-204ENST00000507906 ZNF878C9JN71 531 aa1.82□□□□□ -2.12
USP53-204ENST00000507906 I3L521 148 aa1.82□□□□□ -2.12
USP53-204ENST00000507906 FAAHO00519 579 aa1.82□□□□□ -2.12
USP53-204ENST00000507906 BPGMP07738 259 aa1.82□□□□□ -2.12
USP53-204ENST00000507906 TFPTP0C1Z6 253 aa1.82□□□□□ -2.12
USP53-204ENST00000507906 FAM236CP0DP71 79 aa1.82□□□□□ -2.12
USP53-204ENST00000507906 DEFA4P12838 97 aa1.82□□□□□ -2.12
USP53-204ENST00000507906 HIST1H1TP22492 207 aaPredicted RBP1.82□□□□□ -2.12
USP53-204ENST00000507906 RPS20P60866 119 aaKnown RBP1.82□□□□□ -2.12
USP53-204ENST00000507906 OR13C8Q8NGS7 320 aa1.82□□□□□ -2.12
USP53-204ENST00000507906 CDC26Q8NHZ8 85 aa1.82□□□□□ -2.12
USP53-204ENST00000507906 KLF6Q99612 283 aaPredicted RBP1.82□□□□□ -2.12
USP53-204ENST00000507906 OR8D2Q9GZM6 311 aa1.82□□□□□ -2.12
USP53-204ENST00000507906 TMEM222Q9H0R3 208 aa1.82□□□□□ -2.12
USP53-204ENST00000507906 PAQR5Q9NXK6 330 aaPredicted RBP1.82□□□□□ -2.12
USP53-204ENST00000507906 ANGPT4Q9Y264 503 aa1.82□□□□□ -2.12
USP53-204ENST00000507906 WIZO95785 1651 aa1.82□□□□□ -2.12
USP53-204ENST00000507906 ADAMTS7Q9UKP4 1686 aa1.82□□□□□ -2.12
USP53-204ENST00000507906 VPS8Q8N3P4 1428 aa1.82□□□□□ -2.12
USP53-204ENST00000507906 GOLGA3Q08378 1498 aa1.82□□□□□ -2.12
USP53-204ENST00000507906 CNIH1O95406 144 aa1.81□□□□□ -2.12
USP53-204ENST00000507906 RPL5P46777 297 aaKnown RBP1.81□□□□□ -2.12
USP53-204ENST00000507906 CAPZBP47756 277 aa1.81□□□□□ -2.12
USP53-204ENST00000507906 RAB13P51153 203 aa1.81□□□□□ -2.12
USP53-204ENST00000507906 RAP1GDS1P52306 607 aa1.81□□□□□ -2.12
USP53-204ENST00000507906 SNRPD2P62316 118 aaKnown RBP1.81□□□□□ -2.12
USP53-204ENST00000507906 RPL30P62888 115 aaKnown RBP1.81□□□□□ -2.12
USP53-204ENST00000507906 REEP5Q00765 189 aa1.81□□□□□ -2.12
USP53-204ENST00000507906 MEF2BQ02080 365 aaPredicted RBP1.81□□□□□ -2.12
USP53-204ENST00000507906 KCNJ8Q15842 424 aa1.81□□□□□ -2.12
USP53-204ENST00000507906 GLT6D1Q7Z4J2 308 aa1.81□□□□□ -2.12
USP53-204ENST00000507906 SLC35F6Q8N357 371 aa1.81□□□□□ -2.12
USP53-204ENST00000507906 OR51T1Q8NGJ9 327 aa1.81□□□□□ -2.12
USP53-204ENST00000507906 TLNRD1Q9H1K6 362 aa1.81□□□□□ -2.12
USP53-204ENST00000507906 PSTPIP2Q9H939 334 aa1.81□□□□□ -2.12
USP53-204ENST00000507906 AK3Q9UIJ7 227 aa1.81□□□□□ -2.12
USP53-204ENST00000507906 FAM215AQ9Y5M1 114 aa1.81□□□□□ -2.12
USP53-204ENST00000507906 ROBO3Q96MS0 1386 aa1.81□□□□□ -2.12
USP53-204ENST00000507906 DICER1Q9UPY3 1922 aaKnown RBP1.81□□□□□ -2.12
USP53-204ENST00000507906 NLRP1Q9C000 1473 aa1.81□□□□□ -2.12
USP53-204ENST00000507906 SCRIBQ14160 1630 aa1.8□□□□□ -2.12
USP53-204ENST00000507906 KIF21AQ7Z4S6 1674 aa1.8□□□□□ -2.12
USP53-204ENST00000507906 BCORL1Q5H9F3 1711 aa1.8□□□□□ -2.12
USP53-204ENST00000507906 TMEM235A6NFC5 223 aa1.8□□□□□ -2.12
USP53-204ENST00000507906 NPYP01303 97 aa1.8□□□□□ -2.12
USP53-204ENST00000507906 CD79AP11912 226 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms