RNA–Protein interactions for RNA: ENST00000507302.6

SNF8-205, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 742 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-205ENST00000507302 ZNF436Q9C0F3 470 aaPredicted RBP12.12□□□□□ -0.47
SNF8-205ENST00000507302 MAP6D1Q9H9H5 199 aa12.12□□□□□ -0.47
SNF8-205ENST00000507302 S100A14Q9HCY8 104 aa12.12□□□□□ -0.47
SNF8-205ENST00000507302 MUC4Q99102 2169 aa12.12□□□□□ -0.47
SNF8-205ENST00000507302 IGLV11-55A0A075B6I3 123 aa12.11□□□□□ -0.47
SNF8-205ENST00000507302 TRBV7-1A0A0A6YYK4 115 aa12.11□□□□□ -0.47
SNF8-205ENST00000507302 IGHV3-23P01764 117 aa12.11□□□□□ -0.47
SNF8-205ENST00000507302 MAS1LP35410 378 aa12.11□□□□□ -0.47
SNF8-205ENST00000507302 IRF3Q14653 427 aa12.11□□□□□ -0.47
SNF8-205ENST00000507302 SSX1Q16384 188 aa12.11□□□□□ -0.47
SNF8-205ENST00000507302 RBPMS2Q6ZRY4 209 aaKnown RBP12.11□□□□□ -0.47
SNF8-205ENST00000507302 SLC38A6Q8IZM9 456 aa12.11□□□□□ -0.47
SNF8-205ENST00000507302 KBTBD11O94819 623 aa12.1□□□□□ -0.47
SNF8-205ENST00000507302 IGLV2-14P01704 120 aa12.1□□□□□ -0.47
SNF8-205ENST00000507302 CLEC3BP05452 202 aa12.1□□□□□ -0.47
SNF8-205ENST00000507302 HIST1H1BP16401 226 aaKnown RBP12.1□□□□□ -0.47
SNF8-205ENST00000507302 EIF4EBP1Q13541 118 aaPredicted RBP12.1□□□□□ -0.47
SNF8-205ENST00000507302 ARFRP1Q13795 201 aa12.1□□□□□ -0.47
SNF8-205ENST00000507302 GALNT14Q96FL9 552 aa12.1□□□□□ -0.47
SNF8-205ENST00000507302 CENPOQ9BU64 300 aa12.1□□□□□ -0.47
SNF8-205ENST00000507302 C11orf68Q9H3H3 251 aaKnown RBP12.1□□□□□ -0.47
SNF8-205ENST00000507302 LSM2Q9Y333 95 aaKnown RBP12.1□□□□□ -0.47
SNF8-205ENST00000507302 S4R3C0 116 aa12.1□□□□□ -0.47
SNF8-205ENST00000507302 PKD1P98161 4303 aa12.1□□□□□ -0.47
SNF8-205ENST00000507302 MFSD2BA6NFX1 497 aa12.09□□□□□ -0.47
SNF8-205ENST00000507302 CGB1A6NKQ9 187 aa12.09□□□□□ -0.47
SNF8-205ENST00000507302 S1PR2O95136 353 aa12.09□□□□□ -0.47
SNF8-205ENST00000507302 AREGP15514 252 aa12.09□□□□□ -0.47
SNF8-205ENST00000507302 RPL27AP46776 148 aaKnown RBP12.09□□□□□ -0.47
SNF8-205ENST00000507302 BRWD1-AS2P59051 145 aa12.09□□□□□ -0.47
SNF8-205ENST00000507302 RPL30P62888 115 aaKnown RBP12.09□□□□□ -0.47
SNF8-205ENST00000507302 C2orf76Q3KRA6 126 aa12.09□□□□□ -0.47
SNF8-205ENST00000507302 ZNF585BQ52M93 769 aa12.09□□□□□ -0.47
SNF8-205ENST00000507302 TMEM91Q6ZNR0 172 aa12.09□□□□□ -0.47
SNF8-205ENST00000507302 AHSA2Q719I0 299 aa12.09□□□□□ -0.47
SNF8-205ENST00000507302 ZNF645Q8N7E2 425 aa12.09□□□□□ -0.47
SNF8-205ENST00000507302 VSTM2AQ8TAG5 236 aa12.09□□□□□ -0.47
SNF8-205ENST00000507302 ZNF502Q8TBZ5 544 aa12.09□□□□□ -0.47
SNF8-205ENST00000507302 CYGBQ8WWM9 190 aa12.09□□□□□ -0.47
SNF8-205ENST00000507302 CXorf58Q96LI9 332 aa12.09□□□□□ -0.47
SNF8-205ENST00000507302 OR2A7Q96R45 310 aa12.09□□□□□ -0.47
SNF8-205ENST00000507302 MFFQ9GZY8 342 aa12.09□□□□□ -0.47
SNF8-205ENST00000507302 UFC1Q9Y3C8 167 aa12.09□□□□□ -0.47
SNF8-205ENST00000507302 MFNGO00587 321 aa12.08□□□□□ -0.48
SNF8-205ENST00000507302 FCGR3BO75015 233 aa12.08□□□□□ -0.48
SNF8-205ENST00000507302 DHFRP00374 187 aa12.08□□□□□ -0.48
SNF8-205ENST00000507302 MED14OSP0DP75 135 aa12.08□□□□□ -0.48
SNF8-205ENST00000507302 MYOD1P15172 320 aa12.08□□□□□ -0.48
SNF8-205ENST00000507302 FCGR2BP31994 310 aaPredicted RBP12.08□□□□□ -0.48
SNF8-205ENST00000507302 PLA2G7Q13093 441 aa12.08□□□□□ -0.48
SNF8-205ENST00000507302 LINC00336Q6ZUF6 198 aa12.08□□□□□ -0.48
SNF8-205ENST00000507302 VKORC1L1Q8N0U8 176 aa12.08□□□□□ -0.48
SNF8-205ENST00000507302 TMEM190Q8WZ59 177 aa12.08□□□□□ -0.48
SNF8-205ENST00000507302 FAM3DQ96BQ1 224 aa12.08□□□□□ -0.48
SNF8-205ENST00000507302 PLGRKTQ9HBL7 147 aa12.08□□□□□ -0.48
SNF8-205ENST00000507302 UBQLN2Q9UHD9 624 aa12.08□□□□□ -0.48
SNF8-205ENST00000507302 DYNC1H1Q14204 4646 aaKnown RBP12.07□□□□□ -0.48
SNF8-205ENST00000507302 DNAH11Q96DT5 4516 aa12.07□□□□□ -0.48
SNF8-205ENST00000507302 IGKV1D-8A0A087WSZ0 117 aa12.07□□□□□ -0.48
SNF8-205ENST00000507302 DENRO43583 198 aaKnown RBP12.07□□□□□ -0.48
SNF8-205ENST00000507302 HLA-DQB1P01920 261 aa12.07□□□□□ -0.48
SNF8-205ENST00000507302 NANOS2P60321 138 aaKnown RBP12.07□□□□□ -0.48
SNF8-205ENST00000507302 RAB11BQ15907 218 aa12.07□□□□□ -0.48
SNF8-205ENST00000507302 KCTD9Q7L273 389 aa12.07□□□□□ -0.48
SNF8-205ENST00000507302 RAB3CQ96E17 227 aa12.07□□□□□ -0.48
SNF8-205ENST00000507302 GINS4Q9BRT9 223 aa12.07□□□□□ -0.48
SNF8-205ENST00000507302 MND1Q9BWT6 205 aa12.07□□□□□ -0.48
SNF8-205ENST00000507302 APLNQ9ULZ1 77 aa12.07□□□□□ -0.48
SNF8-205ENST00000507302 RBMX2Q9Y388 322 aaKnown RBP12.07□□□□□ -0.48
SNF8-205ENST00000507302 PRELID3BQ9Y3B1 194 aa12.07□□□□□ -0.48
SNF8-205ENST00000507302 AK6Q9Y3D8 172 aaKnown RBP12.07□□□□□ -0.48
SNF8-205ENST00000507302 RBM7Q9Y580 266 aaKnown RBP12.07□□□□□ -0.48
SNF8-205ENST00000507302 TMEM272A0A1B0GTI8 110 aa12.06□□□□□ -0.48
SNF8-205ENST00000507302 DPPA5A6NC42 116 aa12.06□□□□□ -0.48
SNF8-205ENST00000507302 RAB27BO00194 218 aa12.06□□□□□ -0.48
SNF8-205ENST00000507302 CLDN12P56749 244 aa12.06□□□□□ -0.48
SNF8-205ENST00000507302 GVQW1Q8N7I0 195 aa12.06□□□□□ -0.48
SNF8-205ENST00000507302 C11orf45Q8TAV5 145 aa12.06□□□□□ -0.48
SNF8-205ENST00000507302 C2CD4CQ8TF44 421 aa12.06□□□□□ -0.48
SNF8-205ENST00000507302 MAFIPQ8WZ33 124 aa12.06□□□□□ -0.48
SNF8-205ENST00000507302 RAB22AQ9UL26 194 aa12.06□□□□□ -0.48
SNF8-205ENST00000507302 MRPS7Q9Y2R9 242 aaKnown RBP12.06□□□□□ -0.48
SNF8-205ENST00000507302 SLC22A5O76082 557 aa12.05□□□□□ -0.48
SNF8-205ENST00000507302 GNAO1P09471 354 aa12.05□□□□□ -0.48
SNF8-205ENST00000507302 PTBP1P26599 531 aaKnown RBP eCLIP12.05□□□□□ -0.48
SNF8-205ENST00000507302 RANBP1P43487 201 aa12.05□□□□□ -0.48
SNF8-205ENST00000507302 MRPS15P82914 257 aaKnown RBP12.05□□□□□ -0.48
SNF8-205ENST00000507302 RBMS2Q15434 407 aaKnown RBP12.05□□□□□ -0.48
SNF8-205ENST00000507302 SPHARQ15513 63 aa12.05□□□□□ -0.48
SNF8-205ENST00000507302 DHRSXQ8N5I4 330 aa12.05□□□□□ -0.48
SNF8-205ENST00000507302 PACRGLQ8N7B6 248 aa12.05□□□□□ -0.48
SNF8-205ENST00000507302 OR10R2Q8NGX6 335 aa12.05□□□□□ -0.48
SNF8-205ENST00000507302 OR4S2Q8NH73 311 aa12.05□□□□□ -0.48
SNF8-205ENST00000507302 DCUN1D5Q9BTE7 237 aa12.05□□□□□ -0.48
SNF8-205ENST00000507302 DAZ1Q9NQZ3 744 aaKnown RBP12.05□□□□□ -0.48
SNF8-205ENST00000507302 C8orf4Q9NR00 106 aa12.05□□□□□ -0.48
SNF8-205ENST00000507302 OR2W1Q9Y3N9 320 aa12.05□□□□□ -0.48
SNF8-205ENST00000507302 ABCA13Q86UQ4 5058 aa12.05□□□□□ -0.48
SNF8-205ENST00000507302 ERICH4A6NGS2 130 aa12.04□□□□□ -0.48
SNF8-205ENST00000507302 OR4C46A6NHA9 309 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms