RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 SRSF8Q9BRL6 282 aaKnown RBP11□□□□□ -0.65
HMGCS1-203ENST00000507004 SLC2A9Q9NRM0 540 aa11□□□□□ -0.65
HMGCS1-203ENST00000507004 BET1LQ9NYM9 111 aa11□□□□□ -0.65
HMGCS1-203ENST00000507004 CYB5BO43169 146 aa10.99□□□□□ -0.65
HMGCS1-203ENST00000507004 GGCTO75223 188 aaKnown RBP10.99□□□□□ -0.65
HMGCS1-203ENST00000507004 PPYP01298 95 aa10.99□□□□□ -0.65
HMGCS1-203ENST00000507004 CRYGCP07315 174 aa10.99□□□□□ -0.65
HMGCS1-203ENST00000507004 APELAP0DMC3 54 aa10.99□□□□□ -0.65
HMGCS1-203ENST00000507004 FCGR2CP31995 323 aa10.99□□□□□ -0.65
HMGCS1-203ENST00000507004 TAS2R31P59538 309 aa10.99□□□□□ -0.65
HMGCS1-203ENST00000507004 RPL8P62917 257 aaKnown RBP10.99□□□□□ -0.65
HMGCS1-203ENST00000507004 KLK9Q2XQG4 91 aa10.99□□□□□ -0.65
HMGCS1-203ENST00000507004 C15orf32Q32M92 178 aa10.99□□□□□ -0.65
HMGCS1-203ENST00000507004 THOC7Q6I9Y2 204 aaKnown RBP10.99□□□□□ -0.65
HMGCS1-203ENST00000507004 OR13F1Q8NGS4 319 aa10.99□□□□□ -0.65
HMGCS1-203ENST00000507004 GIMAP1Q8WWP7 306 aa10.99□□□□□ -0.65
HMGCS1-203ENST00000507004 S100A16Q96FQ6 103 aaKnown RBP10.99□□□□□ -0.65
HMGCS1-203ENST00000507004 FYTTD1Q96QD9 318 aaKnown RBP10.99□□□□□ -0.65
HMGCS1-203ENST00000507004 AUNIPQ9H7T9 357 aa10.99□□□□□ -0.65
HMGCS1-203ENST00000507004 TAS2R8Q9NYW2 309 aa10.99□□□□□ -0.65
HMGCS1-203ENST00000507004 TECRQ9NZ01 308 aaKnown RBP10.99□□□□□ -0.65
HMGCS1-203ENST00000507004 KLK9Q9UKQ9 250 aa10.99□□□□□ -0.65
HMGCS1-203ENST00000507004 LGALS9O00182 355 aa10.98□□□□□ -0.65
HMGCS1-203ENST00000507004 HPRT1P00492 218 aa10.98□□□□□ -0.65
HMGCS1-203ENST00000507004 IFNA6P05013 189 aa10.98□□□□□ -0.65
HMGCS1-203ENST00000507004 ZNF735P0CB33 412 aa10.98□□□□□ -0.65
HMGCS1-203ENST00000507004 MECP2P51608 486 aaKnown RBP10.98□□□□□ -0.65
HMGCS1-203ENST00000507004 ZNF45Q02386 682 aa10.98□□□□□ -0.65
HMGCS1-203ENST00000507004 POU2AF1Q16633 256 aa10.98□□□□□ -0.65
HMGCS1-203ENST00000507004 OR2B11Q5JQS5 317 aa10.98□□□□□ -0.65
HMGCS1-203ENST00000507004 HSD17B13Q7Z5P4 300 aaPredicted RBP10.98□□□□□ -0.65
HMGCS1-203ENST00000507004 SPAG16Q8N0X2 631 aa10.98□□□□□ -0.65
HMGCS1-203ENST00000507004 OR5AP2Q8NGF4 316 aa10.98□□□□□ -0.65
HMGCS1-203ENST00000507004 DYNLRB2Q8TF09 96 aa10.98□□□□□ -0.65
HMGCS1-203ENST00000507004 SECTM1Q8WVN6 248 aa10.98□□□□□ -0.65
HMGCS1-203ENST00000507004 SLC25A38Q96DW6 304 aa10.98□□□□□ -0.65
HMGCS1-203ENST00000507004 CXorf58Q96LI9 332 aa10.98□□□□□ -0.65
HMGCS1-203ENST00000507004 TUBA4BQ9H853 241 aa10.98□□□□□ -0.65
HMGCS1-203ENST00000507004 PALMDQ9NP74 551 aa10.98□□□□□ -0.65
HMGCS1-203ENST00000507004 SLC2A8Q9NY64 477 aa10.98□□□□□ -0.65
HMGCS1-203ENST00000507004 THYN1Q9P016 225 aa10.98□□□□□ -0.65
HMGCS1-203ENST00000507004 STAB2Q8WWQ8 2551 aa10.98□□□□□ -0.65
HMGCS1-203ENST00000507004 TEX22C9J3V5 150 aa10.97□□□□□ -0.65
HMGCS1-203ENST00000507004 BMPR1BO00238 502 aa10.97□□□□□ -0.65
HMGCS1-203ENST00000507004 XRCC3O43542 346 aa10.97□□□□□ -0.65
HMGCS1-203ENST00000507004 OR2J3O76001 311 aa10.97□□□□□ -0.65
HMGCS1-203ENST00000507004 TRBV12-3P01733 135 aa10.97□□□□□ -0.65
HMGCS1-203ENST00000507004 NQO2P16083 231 aa10.97□□□□□ -0.65
HMGCS1-203ENST00000507004 HLA-GP17693 338 aa10.97□□□□□ -0.65
HMGCS1-203ENST00000507004 PSMB6P28072 239 aa10.97□□□□□ -0.65
HMGCS1-203ENST00000507004 NEDD8Q15843 81 aa10.97□□□□□ -0.65
HMGCS1-203ENST00000507004 C10orf55Q5SWW7 151 aa10.97□□□□□ -0.65
HMGCS1-203ENST00000507004 OR4A47Q6IF82 309 aa10.97□□□□□ -0.65
HMGCS1-203ENST00000507004 HAPLN4Q86UW8 402 aa10.97□□□□□ -0.65
HMGCS1-203ENST00000507004 GPHB5Q86YW7 130 aa10.97□□□□□ -0.65
HMGCS1-203ENST00000507004 OR5H6Q8NGV6 325 aa10.97□□□□□ -0.65
HMGCS1-203ENST00000507004 EEF1AKMT3Q96AZ1 226 aa10.97□□□□□ -0.65
HMGCS1-203ENST00000507004 ISOC1Q96CN7 298 aa10.97□□□□□ -0.65
HMGCS1-203ENST00000507004 SLC5A7Q9GZV3 580 aa10.97□□□□□ -0.65
HMGCS1-203ENST00000507004 PLEKHA2Q9HB19 425 aa10.97□□□□□ -0.65
HMGCS1-203ENST00000507004 CCL28Q9NRJ3 127 aa10.97□□□□□ -0.65
HMGCS1-203ENST00000507004 FBXL7Q9UJT9 491 aa10.97□□□□□ -0.65
HMGCS1-203ENST00000507004 KMT2CQ8NEZ4 4911 aaKnown RBP10.97□□□□□ -0.65
HMGCS1-203ENST00000507004 TRBV7-1A0A0A6YYK4 115 aa10.96□□□□□ -0.65
HMGCS1-203ENST00000507004 TPPPO94811 219 aa10.96□□□□□ -0.65
HMGCS1-203ENST00000507004 CLEC2LP0C7M8 214 aa10.96□□□□□ -0.65
HMGCS1-203ENST00000507004 DEFA4P12838 97 aa10.96□□□□□ -0.65
HMGCS1-203ENST00000507004 LYL1P12980 280 aa10.96□□□□□ -0.65
HMGCS1-203ENST00000507004 CTRB1P17538 263 aa10.96□□□□□ -0.65
HMGCS1-203ENST00000507004 HERV-K104P61576 105 aa10.96□□□□□ -0.65
HMGCS1-203ENST00000507004 FAM106AQ4KMX7 169 aa10.96□□□□□ -0.65
HMGCS1-203ENST00000507004 CASC10Q5T4H9 136 aa10.96□□□□□ -0.65
HMGCS1-203ENST00000507004 CTRB2Q6GPI1 263 aa10.96□□□□□ -0.65
HMGCS1-203ENST00000507004 VKORC1L1Q8N0U8 176 aa10.96□□□□□ -0.65
HMGCS1-203ENST00000507004 CADM3Q8N126 398 aa10.96□□□□□ -0.65
HMGCS1-203ENST00000507004 THAP7Q9BT49 309 aaPredicted RBP10.96□□□□□ -0.65
HMGCS1-203ENST00000507004 COMMD5Q9GZQ3 224 aa10.96□□□□□ -0.65
HMGCS1-203ENST00000507004 HRASLSQ9HDD0 168 aa10.96□□□□□ -0.65
HMGCS1-203ENST00000507004 IFT46Q9NQC8 304 aa10.96□□□□□ -0.65
HMGCS1-203ENST00000507004 COMMD9Q9P000 198 aa10.96□□□□□ -0.65
HMGCS1-203ENST00000507004 HMX3A6NHT5 357 aa10.95□□□□□ -0.66
HMGCS1-203ENST00000507004 RBMXL2O75526 392 aaKnown RBP10.95□□□□□ -0.66
HMGCS1-203ENST00000507004 PRH1P02810 166 aa10.95□□□□□ -0.66
HMGCS1-203ENST00000507004 IL6RP08887 468 aaPredicted RBP10.95□□□□□ -0.66
HMGCS1-203ENST00000507004 TAS2R46P59540 309 aa10.95□□□□□ -0.66
HMGCS1-203ENST00000507004 ERVK-16P61578 105 aa10.95□□□□□ -0.66
HMGCS1-203ENST00000507004 DEFA5Q01523 94 aa10.95□□□□□ -0.66
HMGCS1-203ENST00000507004 UBE2NLQ5JXB2 153 aa10.95□□□□□ -0.66
HMGCS1-203ENST00000507004 GVQW1Q8N7I0 195 aa10.95□□□□□ -0.66
HMGCS1-203ENST00000507004 A0A087WXM4 84 aa10.94□□□□□ -0.66
HMGCS1-203ENST00000507004 S100GP29377 79 aa10.94□□□□□ -0.66
HMGCS1-203ENST00000507004 ARL3P36405 182 aa10.94□□□□□ -0.66
HMGCS1-203ENST00000507004 BRWD1-AS2P59051 145 aa10.94□□□□□ -0.66
HMGCS1-203ENST00000507004 AADACL3Q5VUY0 350 aa10.94□□□□□ -0.66
HMGCS1-203ENST00000507004 DHRS11Q6UWP2 260 aa10.94□□□□□ -0.66
HMGCS1-203ENST00000507004 SSX9Q7RTT3 188 aa10.94□□□□□ -0.66
HMGCS1-203ENST00000507004 CMTM1Q8IZ96 169 aa10.94□□□□□ -0.66
HMGCS1-203ENST00000507004 IL17DQ8TAD2 202 aa10.94□□□□□ -0.66
HMGCS1-203ENST00000507004 MARC2Q969Z3 335 aa10.94□□□□□ -0.66
HMGCS1-203ENST00000507004 CMTM3Q96MX0 182 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms