RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 TMEM187Q14656 261 aa2.3□□□□□ -2.04
TCOF1-208ENST00000506063 ARL6IP1Q15041 203 aa2.3□□□□□ -2.04
TCOF1-208ENST00000506063 P2RY14Q15391 338 aa2.3□□□□□ -2.04
TCOF1-208ENST00000506063 NEDD8Q15843 81 aa2.3□□□□□ -2.04
TCOF1-208ENST00000506063 Q3ZCU0 254 aa2.3□□□□□ -2.04
TCOF1-208ENST00000506063 RSBN1Q5VWQ0 802 aaPredicted RBP2.3□□□□□ -2.04
TCOF1-208ENST00000506063 STEAP3Q658P3 488 aa2.3□□□□□ -2.04
TCOF1-208ENST00000506063 Q6P435 159 aa2.3□□□□□ -2.04
TCOF1-208ENST00000506063 TMEM88Q6PEY1 159 aa2.3□□□□□ -2.04
TCOF1-208ENST00000506063 MORN3Q6PF18 240 aaPredicted RBP2.3□□□□□ -2.04
TCOF1-208ENST00000506063 FAM131AQ6UXB0 335 aa2.3□□□□□ -2.04
TCOF1-208ENST00000506063 ZNF497Q6ZNH5 498 aa2.3□□□□□ -2.04
TCOF1-208ENST00000506063 SLC16A12Q6ZSM3 486 aa2.3□□□□□ -2.04
TCOF1-208ENST00000506063 ZNF554Q86TJ5 538 aa2.3□□□□□ -2.04
TCOF1-208ENST00000506063 UXS1Q8NBZ7 420 aa2.3□□□□□ -2.04
TCOF1-208ENST00000506063 ZNF485Q8NCK3 441 aa2.3□□□□□ -2.04
TCOF1-208ENST00000506063 CSNK1G2-AS1Q8NCQ2 148 aa2.3□□□□□ -2.04
TCOF1-208ENST00000506063 ZNF439Q8NDP4 499 aa2.3□□□□□ -2.04
TCOF1-208ENST00000506063 OR10A7Q8NGE5 316 aa2.3□□□□□ -2.04
TCOF1-208ENST00000506063 OR56B1Q8NGI3 324 aa2.3□□□□□ -2.04
TCOF1-208ENST00000506063 OR10V1Q8NGI7 309 aa2.3□□□□□ -2.04
TCOF1-208ENST00000506063 IL1F10Q8WWZ1 152 aa2.3□□□□□ -2.04
TCOF1-208ENST00000506063 EDARADDQ8WWZ3 215 aa2.3□□□□□ -2.04
TCOF1-208ENST00000506063 SNAPC3Q92966 411 aa2.3□□□□□ -2.04
TCOF1-208ENST00000506063 ARL11Q969Q4 196 aa2.3□□□□□ -2.04
TCOF1-208ENST00000506063 ORAI1Q96D31 301 aa2.3□□□□□ -2.04
TCOF1-208ENST00000506063 SPAG8Q99932 426 aaPredicted RBP2.3□□□□□ -2.04
TCOF1-208ENST00000506063 CENPOQ9BU64 300 aa2.3□□□□□ -2.04
TCOF1-208ENST00000506063 RIMS4Q9H426 269 aaPredicted RBP2.3□□□□□ -2.04
TCOF1-208ENST00000506063 NCOR1P1Q9H4R4 102 aa2.3□□□□□ -2.04
TCOF1-208ENST00000506063 BANF2Q9H503 90 aa2.3□□□□□ -2.04
TCOF1-208ENST00000506063 DUSP21Q9H596 190 aa2.3□□□□□ -2.04
TCOF1-208ENST00000506063 FNDC4Q9H6D8 234 aaPredicted RBP2.3□□□□□ -2.04
TCOF1-208ENST00000506063 PLEKHJ1Q9NW61 149 aa2.3□□□□□ -2.04
TCOF1-208ENST00000506063 RCC2Q9P258 522 aaKnown RBP2.3□□□□□ -2.04
TCOF1-208ENST00000506063 DKK2Q9UBU2 259 aa2.3□□□□□ -2.04
TCOF1-208ENST00000506063 ZNF230Q9UIE0 474 aaPredicted RBP2.3□□□□□ -2.04
TCOF1-208ENST00000506063 ZNF221Q9UK13 617 aa2.3□□□□□ -2.04
TCOF1-208ENST00000506063 SSR3Q9UNL2 185 aa2.3□□□□□ -2.04
TCOF1-208ENST00000506063 LSM2Q9Y333 95 aaKnown RBP2.3□□□□□ -2.04
TCOF1-208ENST00000506063 PEX16Q9Y5Y5 336 aa2.3□□□□□ -2.04
TCOF1-208ENST00000506063 V9GY05 133 aa2.3□□□□□ -2.04
TCOF1-208ENST00000506063 A0A075B6Q4 140 aa2.29□□□□□ -2.04
TCOF1-208ENST00000506063 A0A087WXM4 84 aa2.29□□□□□ -2.04
TCOF1-208ENST00000506063 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.29□□□□□ -2.04
TCOF1-208ENST00000506063 IGHV3-43A0A0B4J1X8 118 aa2.29□□□□□ -2.04
TCOF1-208ENST00000506063 TRAV1-2A0A0B4J238 106 aa2.29□□□□□ -2.04
TCOF1-208ENST00000506063 A0A1B0GW64 132 aa2.29□□□□□ -2.04
TCOF1-208ENST00000506063 TRDV1A0A1B0GX56 115 aa2.29□□□□□ -2.04
TCOF1-208ENST00000506063 UBE2QL1A1L167 161 aa2.29□□□□□ -2.04
TCOF1-208ENST00000506063 NOTOA8MTQ0 251 aa2.29□□□□□ -2.04
TCOF1-208ENST00000506063 PPP5D1E7EU14 171 aa2.29□□□□□ -2.04
TCOF1-208ENST00000506063 TSPAN4O14817 238 aa2.29□□□□□ -2.04
TCOF1-208ENST00000506063 DENRO43583 198 aaKnown RBP2.29□□□□□ -2.04
TCOF1-208ENST00000506063 ORC5O43913 435 aa2.29□□□□□ -2.04
TCOF1-208ENST00000506063 CREBL2O60519 120 aaPredicted RBP2.29□□□□□ -2.04
TCOF1-208ENST00000506063 CA1P00915 261 aaPredicted RBP2.29□□□□□ -2.04
TCOF1-208ENST00000506063 HBZP02008 142 aa2.29□□□□□ -2.04
TCOF1-208ENST00000506063 APOA2P02652 100 aa2.29□□□□□ -2.04
TCOF1-208ENST00000506063 IGHV3-43DP0DP04 118 aa2.29□□□□□ -2.04
TCOF1-208ENST00000506063 SRMP19623 302 aa2.29□□□□□ -2.04
TCOF1-208ENST00000506063 GZMHP20718 246 aa2.29□□□□□ -2.04
TCOF1-208ENST00000506063 C4BPBP20851 252 aa2.29□□□□□ -2.04
TCOF1-208ENST00000506063 AADACP22760 399 aa2.29□□□□□ -2.04
TCOF1-208ENST00000506063 OR3A3P47888 321 aa2.29□□□□□ -2.04
TCOF1-208ENST00000506063 SERPINB10P48595 397 aa2.29□□□□□ -2.04
TCOF1-208ENST00000506063 ZNF134P52741 427 aa2.29□□□□□ -2.04
TCOF1-208ENST00000506063 SCAND1P57086 179 aa2.29□□□□□ -2.04
TCOF1-208ENST00000506063 GNG2P59768 71 aa2.29□□□□□ -2.04
TCOF1-208ENST00000506063 FABP5Q01469 135 aa2.29□□□□□ -2.04
TCOF1-208ENST00000506063 TMEM267Q0VDI3 215 aaPredicted RBP2.29□□□□□ -2.04
TCOF1-208ENST00000506063 ARFRP1Q13795 201 aa2.29□□□□□ -2.04
TCOF1-208ENST00000506063 INSL4Q14641 139 aa2.29□□□□□ -2.04
TCOF1-208ENST00000506063 PLGLAQ15195 96 aa2.29□□□□□ -2.04
TCOF1-208ENST00000506063 C1orf100Q5SVJ3 147 aa2.29□□□□□ -2.04
TCOF1-208ENST00000506063 SYT6Q5T7P8 510 aaPredicted RBP2.29□□□□□ -2.04
TCOF1-208ENST00000506063 HES5Q5TA89 166 aa2.29□□□□□ -2.04
TCOF1-208ENST00000506063 UBE2UQ5VVX9 321 aa2.29□□□□□ -2.04
TCOF1-208ENST00000506063 C22orf42Q6IC83 251 aa2.29□□□□□ -2.04
TCOF1-208ENST00000506063 LAIR2Q6ISS4 152 aa2.29□□□□□ -2.04
TCOF1-208ENST00000506063 FAM71F2Q6NXP2 309 aa2.29□□□□□ -2.04
TCOF1-208ENST00000506063 SFXN4Q6P4A7 337 aa2.29□□□□□ -2.04
TCOF1-208ENST00000506063 ZNF66Q6ZN08 573 aa2.29□□□□□ -2.04
TCOF1-208ENST00000506063 SLC25A48Q6ZT89 311 aaKnown RBP2.29□□□□□ -2.04
TCOF1-208ENST00000506063 LRRTM1Q86UE6 522 aa2.29□□□□□ -2.04
TCOF1-208ENST00000506063 CROCCP3Q8IVE0 287 aa2.29□□□□□ -2.04
TCOF1-208ENST00000506063 C8orf31Q8N9H6 132 aa2.29□□□□□ -2.04
TCOF1-208ENST00000506063 OR5T1Q8NG75 326 aa2.29□□□□□ -2.04
TCOF1-208ENST00000506063 OR52M1Q8NGK5 317 aa2.29□□□□□ -2.04
TCOF1-208ENST00000506063 OR4K15Q8NH41 348 aa2.29□□□□□ -2.04
TCOF1-208ENST00000506063 RFESDQ8TAC1 157 aa2.29□□□□□ -2.04
TCOF1-208ENST00000506063 PLPPR1Q8TBJ4 325 aa2.29□□□□□ -2.04
TCOF1-208ENST00000506063 LGALS14Q8TCE9 139 aa2.29□□□□□ -2.04
TCOF1-208ENST00000506063 ABHD5Q8WTS1 349 aa2.29□□□□□ -2.04
TCOF1-208ENST00000506063 CCDC107Q8WV48 283 aa2.29□□□□□ -2.04
TCOF1-208ENST00000506063 AP3S1Q92572 193 aa2.29□□□□□ -2.04
TCOF1-208ENST00000506063 FAM3DQ96BQ1 224 aa2.29□□□□□ -2.04
TCOF1-208ENST00000506063 GALMQ96C23 342 aa2.29□□□□□ -2.04
TCOF1-208ENST00000506063 RAB3CQ96E17 227 aa2.29□□□□□ -2.04
TCOF1-208ENST00000506063 CMSS1Q9BQ75 279 aaKnown RBP2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms