RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 GPER1Q99527 375 aa5.04□□□□□ -1.6
VCAN-206ENST00000505615 SPAG8Q99932 426 aaPredicted RBP5.04□□□□□ -1.6
VCAN-206ENST00000505615 BCL7BQ9BQE9 202 aa5.04□□□□□ -1.6
VCAN-206ENST00000505615 AGMATQ9BSE5 352 aa5.04□□□□□ -1.6
VCAN-206ENST00000505615 SCRT1Q9BWW7 348 aa5.04□□□□□ -1.6
VCAN-206ENST00000505615 CSTL1Q9H114 145 aa5.04□□□□□ -1.6
VCAN-206ENST00000505615 METTL9Q9H1A3 318 aa5.04□□□□□ -1.6
VCAN-206ENST00000505615 ZNF556Q9HAH1 456 aa5.04□□□□□ -1.6
VCAN-206ENST00000505615 PIPOXQ9P0Z9 390 aa5.04□□□□□ -1.6
VCAN-206ENST00000505615 WARS2Q9UGM6 360 aaKnown RBP5.04□□□□□ -1.6
VCAN-206ENST00000505615 MPTX1A8MV57 137 aa5.03□□□□□ -1.6
VCAN-206ENST00000505615 B5MCH6 92 aa5.03□□□□□ -1.6
VCAN-206ENST00000505615 CA11O75493 328 aa5.03□□□□□ -1.6
VCAN-206ENST00000505615 CIB2O75838 187 aa5.03□□□□□ -1.6
VCAN-206ENST00000505615 CST1P01037 141 aa5.03□□□□□ -1.6
VCAN-206ENST00000505615 HTR1AP08908 422 aa5.03□□□□□ -1.6
VCAN-206ENST00000505615 SCTP09683 121 aa5.03□□□□□ -1.6
VCAN-206ENST00000505615 ANXA8P13928 327 aa5.03□□□□□ -1.6
VCAN-206ENST00000505615 CALB2P22676 271 aa5.03□□□□□ -1.6
VCAN-206ENST00000505615 RCN1Q15293 331 aa5.03□□□□□ -1.6
VCAN-206ENST00000505615 HMGN3Q15651 99 aa5.03□□□□□ -1.6
VCAN-206ENST00000505615 C15orf32Q32M92 178 aa5.03□□□□□ -1.6
VCAN-206ENST00000505615 FAM98BQ52LJ0 330 aaKnown RBP5.03□□□□□ -1.6
VCAN-206ENST00000505615 SIGIRRQ6IA17 410 aa5.03□□□□□ -1.6
VCAN-206ENST00000505615 UNQ9165/PRO28630Q6UXU0 137 aa5.03□□□□□ -1.6
VCAN-206ENST00000505615 PDPNQ86YL7 162 aa5.03□□□□□ -1.6
VCAN-206ENST00000505615 SLC38A6Q8IZM9 456 aa5.03□□□□□ -1.6
VCAN-206ENST00000505615 SETD9Q8NE22 299 aa5.03□□□□□ -1.6
VCAN-206ENST00000505615 OR5B3Q8NH48 314 aa5.03□□□□□ -1.6
VCAN-206ENST00000505615 OR4A5Q8NH83 315 aa5.03□□□□□ -1.6
VCAN-206ENST00000505615 ST8SIA2Q92186 375 aa5.03□□□□□ -1.6
VCAN-206ENST00000505615 NRBF2Q96F24 287 aa5.03□□□□□ -1.6
VCAN-206ENST00000505615 PELI1Q96FA3 418 aa5.03□□□□□ -1.6
VCAN-206ENST00000505615 C18orf15Q96N68 181 aa5.03□□□□□ -1.6
VCAN-206ENST00000505615 IL4I1Q96RQ9 567 aa5.03□□□□□ -1.6
VCAN-206ENST00000505615 SPACA1Q9HBV2 294 aa5.03□□□□□ -1.6
VCAN-206ENST00000505615 IGHV4-28A0A0C4DH34 117 aa5.02□□□□□ -1.61
VCAN-206ENST00000505615 ZAR1LA6NP61 321 aa5.02□□□□□ -1.61
VCAN-206ENST00000505615 SRRM4A7MD48 611 aaKnown RBP5.02□□□□□ -1.61
VCAN-206ENST00000505615 MCRIP1C9JLW8 97 aa5.02□□□□□ -1.61
VCAN-206ENST00000505615 OGG1O15527 345 aa5.02□□□□□ -1.61
VCAN-206ENST00000505615 OR2J3O76001 311 aa5.02□□□□□ -1.61
VCAN-206ENST00000505615 IGHV3-23P01764 117 aa5.02□□□□□ -1.61
VCAN-206ENST00000505615 VPREB1P12018 145 aa5.02□□□□□ -1.61
VCAN-206ENST00000505615 ZNF182P17025 639 aaPredicted RBP5.02□□□□□ -1.61
VCAN-206ENST00000505615 RAB3AP20336 220 aa5.02□□□□□ -1.61
VCAN-206ENST00000505615 MAP2K4P45985 399 aa5.02□□□□□ -1.61
VCAN-206ENST00000505615 GAGE13Q4V321 117 aa5.02□□□□□ -1.61
VCAN-206ENST00000505615 SLC25A30Q5SVS4 291 aa5.02□□□□□ -1.61
VCAN-206ENST00000505615 OR4A47Q6IF82 309 aa5.02□□□□□ -1.61
VCAN-206ENST00000505615 C19orf35Q6ZS72 473 aa5.02□□□□□ -1.61
VCAN-206ENST00000505615 APRG1Q8IVJ8 170 aa5.02□□□□□ -1.61
VCAN-206ENST00000505615 NECAP1Q8NC96 275 aa5.02□□□□□ -1.61
VCAN-206ENST00000505615 RNASE8Q8TDE3 154 aaKnown RBP5.02□□□□□ -1.61
VCAN-206ENST00000505615 MARC2Q969Z3 335 aa5.02□□□□□ -1.61
VCAN-206ENST00000505615 CPNE2Q96FN4 548 aaPredicted RBP5.02□□□□□ -1.61
VCAN-206ENST00000505615 OR14A2Q96R54 314 aa5.02□□□□□ -1.61
VCAN-206ENST00000505615 CHRDL1Q9BU40 450 aa5.02□□□□□ -1.61
VCAN-206ENST00000505615 C5orf66Q9H5L9 145 aa5.02□□□□□ -1.61
VCAN-206ENST00000505615 TAS2R4Q9NYW5 299 aa5.02□□□□□ -1.61
VCAN-206ENST00000505615 KCNIP1Q9NZI2 227 aa5.02□□□□□ -1.61
VCAN-206ENST00000505615 RPL36Q9Y3U8 105 aaKnown RBP5.02□□□□□ -1.61
VCAN-206ENST00000505615 DEFB131BA0A096LNP1 70 aa5.01□□□□□ -1.61
VCAN-206ENST00000505615 UBE2QL1A1L167 161 aa5.01□□□□□ -1.61
VCAN-206ENST00000505615 J3QRE1 110 aa5.01□□□□□ -1.61
VCAN-206ENST00000505615 ITGB1BP1O14713 200 aa5.01□□□□□ -1.61
VCAN-206ENST00000505615 GPX5O75715 221 aa5.01□□□□□ -1.61
VCAN-206ENST00000505615 T-ENOLP0DO92 83 aa5.01□□□□□ -1.61
VCAN-206ENST00000505615 GTF2F2P13984 249 aa5.01□□□□□ -1.61
VCAN-206ENST00000505615 DAPP51397 102 aa5.01□□□□□ -1.61
VCAN-206ENST00000505615 MS4A2Q01362 244 aa5.01□□□□□ -1.61
VCAN-206ENST00000505615 VWC2Q2TAL6 325 aa5.01□□□□□ -1.61
VCAN-206ENST00000505615 FAM106AQ4KMX7 169 aa5.01□□□□□ -1.61
VCAN-206ENST00000505615 SLC22A6Q4U2R8 563 aa5.01□□□□□ -1.61
VCAN-206ENST00000505615 ZNF585BQ52M93 769 aa5.01□□□□□ -1.61
VCAN-206ENST00000505615 CLEC19AQ6UXS0 136 aa5.01□□□□□ -1.61
VCAN-206ENST00000505615 TMEM182Q6ZP80 229 aaPredicted RBP5.01□□□□□ -1.61
VCAN-206ENST00000505615 ADGRG5Q8IZF4 528 aa5.01□□□□□ -1.61
VCAN-206ENST00000505615 DEFB107AQ8IZN7 70 aa5.01□□□□□ -1.61
VCAN-206ENST00000505615 TTC9CQ8N5M4 171 aa5.01□□□□□ -1.61
VCAN-206ENST00000505615 OR13C5Q8NGS8 318 aa5.01□□□□□ -1.61
VCAN-206ENST00000505615 SRSF12Q8WXF0 261 aaKnown RBP5.01□□□□□ -1.61
VCAN-206ENST00000505615 DNAJC9Q8WXX5 260 aa5.01□□□□□ -1.61
VCAN-206ENST00000505615 GALMQ96C23 342 aa5.01□□□□□ -1.61
VCAN-206ENST00000505615 NSL1Q96IY1 281 aa5.01□□□□□ -1.61
VCAN-206ENST00000505615 PHB2Q99623 299 aa5.01□□□□□ -1.61
VCAN-206ENST00000505615 NDUFAF3Q9BU61 184 aa5.01□□□□□ -1.61
VCAN-206ENST00000505615 PRRG3Q9BZD7 231 aa5.01□□□□□ -1.61
VCAN-206ENST00000505615 ISG20L2Q9H9L3 353 aaKnown RBP5.01□□□□□ -1.61
VCAN-206ENST00000505615 MRPL27Q9P0M9 148 aaKnown RBP5.01□□□□□ -1.61
VCAN-206ENST00000505615 CELA1Q9UNI1 258 aa5.01□□□□□ -1.61
VCAN-206ENST00000505615 EXOSC1Q9Y3B2 195 aaKnown RBP5.01□□□□□ -1.61
VCAN-206ENST00000505615 PEX16Q9Y5Y5 336 aa5.01□□□□□ -1.61
VCAN-206ENST00000505615 S4R3C0 116 aa5.01□□□□□ -1.61
VCAN-206ENST00000505615 A0A0B4J293 547 aa5□□□□□ -1.61
VCAN-206ENST00000505615 ZNF780AO75290 641 aaPredicted RBP5□□□□□ -1.61
VCAN-206ENST00000505615 CA1P00915 261 aaPredicted RBP5□□□□□ -1.61
VCAN-206ENST00000505615 IFNA10P01566 189 aa5□□□□□ -1.61
VCAN-206ENST00000505615 APOA2P02652 100 aa5□□□□□ -1.61
VCAN-206ENST00000505615 GLAP06280 429 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms