RNA–Protein interactions for RNA: ENST00000505555.5

SDHA-206, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,230 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-206ENST00000505555 NDUFB7P17568 137 aa16.04■□□□□ 0.16
SDHA-206ENST00000505555 RPS10P46783 165 aaKnown RBP16.04■□□□□ 0.16
SDHA-206ENST00000505555 ZNF439Q8NDP4 499 aa16.04■□□□□ 0.16
SDHA-206ENST00000505555 FAM216AQ8WUB2 273 aa16.04■□□□□ 0.16
SDHA-206ENST00000505555 RHOVQ96L33 236 aa16.04■□□□□ 0.16
SDHA-206ENST00000505555 P2RX4Q99571 388 aa16.04■□□□□ 0.16
SDHA-206ENST00000505555 TCEAL7Q9BRU2 100 aa16.04■□□□□ 0.16
SDHA-206ENST00000505555 ELOVL5Q9NYP7 299 aa16.04■□□□□ 0.16
SDHA-206ENST00000505555 IDI2-AS1Q9NZ38 188 aa16.04■□□□□ 0.16
SDHA-206ENST00000505555 CXorf65A6NEN9 183 aa16.03■□□□□ 0.16
SDHA-206ENST00000505555 MBP02144 154 aa16.03■□□□□ 0.16
SDHA-206ENST00000505555 S100A9P06702 114 aaKnown RBP16.03■□□□□ 0.16
SDHA-206ENST00000505555 MYOD1P15172 320 aa16.03■□□□□ 0.16
SDHA-206ENST00000505555 TMEM170AQ8WVE7 144 aa16.03■□□□□ 0.16
SDHA-206ENST00000505555 ACTR3CQ9C0K3 210 aaPredicted RBP16.03■□□□□ 0.16
SDHA-206ENST00000505555 GAB2Q9UQC2 676 aa16.03■□□□□ 0.16
SDHA-206ENST00000505555 DSCAML1Q8TD84 2053 aa16.03■□□□□ 0.16
SDHA-206ENST00000505555 TGIF2-C20orf24A0A0A6YYL0 155 aa16.03■□□□□ 0.16
SDHA-206ENST00000505555 ITGB1BP1O14713 200 aa16.03■□□□□ 0.16
SDHA-206ENST00000505555 GFRA3O60609 400 aa16.03■□□□□ 0.16
SDHA-206ENST00000505555 KIR2DS2P43631 304 aa16.03■□□□□ 0.16
SDHA-206ENST00000505555 MEF2BQ02080 365 aaPredicted RBP16.03■□□□□ 0.16
SDHA-206ENST00000505555 TBR1Q16650 682 aa16.03■□□□□ 0.16
SDHA-206ENST00000505555 ZNF674Q2M3X9 581 aa16.03■□□□□ 0.16
SDHA-206ENST00000505555 TCF19Q9Y242 345 aa16.03■□□□□ 0.16
SDHA-206ENST00000505555 WDR83OSQ9Y284 106 aa16.03■□□□□ 0.16
SDHA-206ENST00000505555 C17orf100A8MU93 164 aa16.02■□□□□ 0.16
SDHA-206ENST00000505555 CLN5O75503 358 aa16.02■□□□□ 0.16
SDHA-206ENST00000505555 TEX36Q5VZQ5 186 aa16.02■□□□□ 0.16
SDHA-206ENST00000505555 OR4A47Q6IF82 309 aa16.02■□□□□ 0.16
SDHA-206ENST00000505555 OR52E5Q8NH55 327 aa16.02■□□□□ 0.16
SDHA-206ENST00000505555 ZCCHC14Q8WYQ9 949 aaKnown RBP16.02■□□□□ 0.16
SDHA-206ENST00000505555 SDF2L1Q9HCN8 221 aa16.02■□□□□ 0.16
SDHA-206ENST00000505555 TET2Q6N021 2002 aaPredicted RBP16.02■□□□□ 0.16
SDHA-206ENST00000505555 C17orf112F2Z3M2 114 aa16.02■□□□□ 0.15
SDHA-206ENST00000505555 WDR25Q64LD2 544 aaPredicted RBP16.02■□□□□ 0.15
SDHA-206ENST00000505555 RAB9BQ9NP90 201 aa16.02■□□□□ 0.15
SDHA-206ENST00000505555 YLPM1P49750 1951 aaKnown RBP16.01■□□□□ 0.15
SDHA-206ENST00000505555 TRAV38-1A0A0B4J264 116 aa16.01■□□□□ 0.15
SDHA-206ENST00000505555 ZNF729A6NN14 1252 aaPredicted RBP16.01■□□□□ 0.15
SDHA-206ENST00000505555 PSMB3P49720 205 aa16.01■□□□□ 0.15
SDHA-206ENST00000505555 THBS3P49746 956 aa16.01■□□□□ 0.15
SDHA-206ENST00000505555 SCNM1Q9BWG6 230 aa16.01■□□□□ 0.15
SDHA-206ENST00000505555 B4DEV8 164 aa16■□□□□ 0.15
SDHA-206ENST00000505555 TNFRSF1AP19438 455 aa16■□□□□ 0.15
SDHA-206ENST00000505555 HOXA5P20719 270 aa16■□□□□ 0.15
SDHA-206ENST00000505555 RPP30P78346 268 aaKnown RBP16■□□□□ 0.15
SDHA-206ENST00000505555 PMS2P11Q13670 270 aa16■□□□□ 0.15
SDHA-206ENST00000505555 ZNF436-AS1Q8NC38 126 aaPredicted RBP16■□□□□ 0.15
SDHA-206ENST00000505555 RPUSD4Q96CM3 377 aaKnown RBP16■□□□□ 0.15
SDHA-206ENST00000505555 MS4A5Q9H3V2 200 aa16■□□□□ 0.15
SDHA-206ENST00000505555 JKAMPQ9P055 326 aa16■□□□□ 0.15
SDHA-206ENST00000505555 TANC2Q9HCD6 1990 aa16■□□□□ 0.15
SDHA-206ENST00000505555 C15orf61A6NNL5 157 aa16■□□□□ 0.15
SDHA-206ENST00000505555 PRSS46E5RG02 174 aa16■□□□□ 0.15
SDHA-206ENST00000505555 FCN3O75636 299 aa16■□□□□ 0.15
SDHA-206ENST00000505555 KIAA0141Q14154 515 aaPredicted RBP16■□□□□ 0.15
SDHA-206ENST00000505555 PDLIM3Q53GG5 364 aaPredicted RBP16■□□□□ 0.15
SDHA-206ENST00000505555 TREML4Q6UXN2 200 aa16■□□□□ 0.15
SDHA-206ENST00000505555 CORO2AQ92828 525 aa16■□□□□ 0.15
SDHA-206ENST00000505555 RPUSD1Q9UJJ7 312 aaKnown RBP16■□□□□ 0.15
SDHA-206ENST00000505555 SSUH2Q9Y2M2 353 aa16■□□□□ 0.15
SDHA-206ENST00000505555 CYB5BO43169 146 aa15.99■□□□□ 0.15
SDHA-206ENST00000505555 ACOT6Q3I5F7 207 aaPredicted RBP15.99■□□□□ 0.15
SDHA-206ENST00000505555 OR4F5Q8NH21 305 aa15.99■□□□□ 0.15
SDHA-206ENST00000505555 CCL17Q92583 94 aa15.99■□□□□ 0.15
SDHA-206ENST00000505555 WFIKKN1Q96NZ8 548 aa15.99■□□□□ 0.15
SDHA-206ENST00000505555 OR4F4Q96R69 305 aa15.99■□□□□ 0.15
SDHA-206ENST00000505555 SSX3Q99909 188 aa15.99■□□□□ 0.15
SDHA-206ENST00000505555 SMIM7Q9BQ49 75 aa15.99■□□□□ 0.15
SDHA-206ENST00000505555 HINT2Q9BX68 163 aa15.99■□□□□ 0.15
SDHA-206ENST00000505555 PATZ1Q9HBE1 687 aaKnown RBP15.99■□□□□ 0.15
SDHA-206ENST00000505555 SLC25A10Q9UBX3 287 aaPredicted RBP15.99■□□□□ 0.15
SDHA-206ENST00000505555 ZNF835Q9Y2P0 537 aa15.99■□□□□ 0.15
SDHA-206ENST00000505555 PAGE4O60829 102 aa15.99■□□□□ 0.15
SDHA-206ENST00000505555 OPN1MWP04001 364 aa15.99■□□□□ 0.15
SDHA-206ENST00000505555 IGKV1-16P04430 117 aa15.99■□□□□ 0.15
SDHA-206ENST00000505555 CT45A6P0DMU7 189 aa15.99■□□□□ 0.15
SDHA-206ENST00000505555 CT45A5P0DMU8 189 aa15.99■□□□□ 0.15
SDHA-206ENST00000505555 CT45A7P0DMV0 189 aa15.99■□□□□ 0.15
SDHA-206ENST00000505555 OPN1MW2P0DN77 364 aa15.99■□□□□ 0.15
SDHA-206ENST00000505555 OPN1MW3P0DN78 364 aa15.99■□□□□ 0.15
SDHA-206ENST00000505555 CDC34P49427 236 aaPredicted RBP15.99■□□□□ 0.15
SDHA-206ENST00000505555 PNRC1Q12796 327 aaPredicted RBP15.99■□□□□ 0.15
SDHA-206ENST00000505555 NCMAPQ5T1S8 102 aa15.99■□□□□ 0.15
SDHA-206ENST00000505555 LINC00574Q9H8X3 128 aa15.99■□□□□ 0.15
SDHA-206ENST00000505555 GSN-AS1Q9NRJ2 163 aa15.99■□□□□ 0.15
SDHA-206ENST00000505555 hADV38S2A0JD32 116 aa15.98■□□□□ 0.15
SDHA-206ENST00000505555 CCL3L1P16619 93 aa15.98■□□□□ 0.15
SDHA-206ENST00000505555 SLC25A48Q6ZT89 311 aaKnown RBP15.98■□□□□ 0.15
SDHA-206ENST00000505555 RND1Q92730 232 aa15.98■□□□□ 0.15
SDHA-206ENST00000505555 NEUROG1Q92886 237 aa15.98■□□□□ 0.15
SDHA-206ENST00000505555 MGST2Q99735 147 aa15.98■□□□□ 0.15
SDHA-206ENST00000505555 SAP30LQ9HAJ7 183 aa15.98■□□□□ 0.15
SDHA-206ENST00000505555 NIT2Q9NQR4 276 aa15.98■□□□□ 0.15
SDHA-206ENST00000505555 FAM87AP0C7U9 286 aa15.98■□□□□ 0.15
SDHA-206ENST00000505555 RPL31P62899 125 aaKnown RBP15.98■□□□□ 0.15
SDHA-206ENST00000505555 TMEM14BQ9NUH8 114 aa15.98■□□□□ 0.15
SDHA-206ENST00000505555 NKX6-3A6NJ46 265 aa15.97■□□□□ 0.15
SDHA-206ENST00000505555 SRRM4A7MD48 611 aaKnown RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms