RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 VDAC2P45880 294 aaPredicted RBP9.85□□□□□ -0.83
UBE3D-206ENST00000505226 RPL29P47914 159 aaKnown RBP9.85□□□□□ -0.83
UBE3D-206ENST00000505226 WDR82Q6UXN9 313 aa9.85□□□□□ -0.83
UBE3D-206ENST00000505226 NANOS1Q8WY41 292 aaKnown RBP9.85□□□□□ -0.83
UBE3D-206ENST00000505226 RYDENQ9NUL5 291 aaKnown RBP9.85□□□□□ -0.83
UBE3D-206ENST00000505226 ZNF705FA8MVS1 300 aaPredicted RBP9.85□□□□□ -0.83
UBE3D-206ENST00000505226 CER1O95813 267 aa9.85□□□□□ -0.83
UBE3D-206ENST00000505226 SP1P08047 785 aa9.85□□□□□ -0.83
UBE3D-206ENST00000505226 ZNF705DP0CH99 300 aaPredicted RBP9.85□□□□□ -0.83
UBE3D-206ENST00000505226 ZNF705BP0CI00 300 aaPredicted RBP9.85□□□□□ -0.83
UBE3D-206ENST00000505226 KITLGP21583 273 aa9.85□□□□□ -0.83
UBE3D-206ENST00000505226 OPRK1P41145 380 aa9.85□□□□□ -0.83
UBE3D-206ENST00000505226 TPTE2P1Q5T6R2 138 aa9.85□□□□□ -0.83
UBE3D-206ENST00000505226 CMTM2Q8TAZ6 248 aa9.85□□□□□ -0.83
UBE3D-206ENST00000505226 ZDHHC11Q9H8X9 412 aa9.85□□□□□ -0.83
UBE3D-206ENST00000505226 TMEM106BQ9NUM4 274 aa9.85□□□□□ -0.83
UBE3D-206ENST00000505226 KNTC1P50748 2209 aa9.84□□□□□ -0.83
UBE3D-206ENST00000505226 A6NNC1 897 aa9.84□□□□□ -0.83
UBE3D-206ENST00000505226 GFRA3O60609 400 aa9.84□□□□□ -0.83
UBE3D-206ENST00000505226 SERF1AO75920 110 aa9.84□□□□□ -0.83
UBE3D-206ENST00000505226 AGFG2O95081 481 aa9.84□□□□□ -0.83
UBE3D-206ENST00000505226 SELENOTP62341 195 aa9.84□□□□□ -0.83
UBE3D-206ENST00000505226 AARDQ4LEZ3 155 aa9.84□□□□□ -0.83
UBE3D-206ENST00000505226 GCNT2Q8N0V5 402 aa9.84□□□□□ -0.83
UBE3D-206ENST00000505226 CD177Q8N6Q3 437 aa9.84□□□□□ -0.83
UBE3D-206ENST00000505226 HSD17B10Q99714 261 aaKnown RBP9.84□□□□□ -0.83
UBE3D-206ENST00000505226 MSL2Q9HCI7 577 aa9.84□□□□□ -0.83
UBE3D-206ENST00000505226 MDFIC2A0A1B0GVS7 189 aa9.84□□□□□ -0.83
UBE3D-206ENST00000505226 ZNF134P52741 427 aa9.84□□□□□ -0.83
UBE3D-206ENST00000505226 GABRA6Q16445 453 aa9.84□□□□□ -0.83
UBE3D-206ENST00000505226 KRTCAP3Q53RY4 240 aa9.84□□□□□ -0.83
UBE3D-206ENST00000505226 RPL39P5Q59GN2 51 aa9.84□□□□□ -0.83
UBE3D-206ENST00000505226 OR10G8Q8NGN5 311 aa9.84□□□□□ -0.83
UBE3D-206ENST00000505226 IL17BQ9UHF5 180 aa9.84□□□□□ -0.83
UBE3D-206ENST00000505226 GPR179Q6PRD1 2367 aa9.84□□□□□ -0.83
UBE3D-206ENST00000505226 ACP1P24666 158 aa9.83□□□□□ -0.84
UBE3D-206ENST00000505226 RPL31P62899 125 aaKnown RBP9.83□□□□□ -0.84
UBE3D-206ENST00000505226 TGFBR3Q03167 851 aa9.83□□□□□ -0.84
UBE3D-206ENST00000505226 AHRRA9YTQ3 701 aa9.83□□□□□ -0.84
UBE3D-206ENST00000505226 EDDM3AQ14507 147 aa9.83□□□□□ -0.84
UBE3D-206ENST00000505226 MDS2Q8NDY4 140 aa9.83□□□□□ -0.84
UBE3D-206ENST00000505226 COMPP49747 757 aaPredicted RBP9.83□□□□□ -0.84
UBE3D-206ENST00000505226 UBE2NP61088 152 aaKnown RBP9.83□□□□□ -0.84
UBE3D-206ENST00000505226 OR5I1Q13606 314 aa9.83□□□□□ -0.84
UBE3D-206ENST00000505226 ARSJQ5FYB0 599 aaPredicted RBP9.83□□□□□ -0.84
UBE3D-206ENST00000505226 TOMM20LQ6UXN7 152 aa9.83□□□□□ -0.84
UBE3D-206ENST00000505226 ZNF705AQ6ZN79 300 aaPredicted RBP9.83□□□□□ -0.84
UBE3D-206ENST00000505226 TCTEX1D1Q8N7M0 179 aa9.83□□□□□ -0.84
UBE3D-206ENST00000505226 MRPL18Q9H0U6 180 aaKnown RBP9.83□□□□□ -0.84
UBE3D-206ENST00000505226 HEYLQ9NQ87 328 aaPredicted RBP9.83□□□□□ -0.84
UBE3D-206ENST00000505226 LSM4Q9Y4Z0 139 aaKnown RBP9.83□□□□□ -0.84
UBE3D-206ENST00000505226 CXorf1O96002 111 aa9.82□□□□□ -0.84
UBE3D-206ENST00000505226 IRF2P14316 349 aa9.82□□□□□ -0.84
UBE3D-206ENST00000505226 ZNF25P17030 456 aaPredicted RBP9.82□□□□□ -0.84
UBE3D-206ENST00000505226 TMPRSS3P57727 454 aa9.82□□□□□ -0.84
UBE3D-206ENST00000505226 RELBQ01201 579 aa9.82□□□□□ -0.84
UBE3D-206ENST00000505226 ZNF90Q03938 601 aa9.82□□□□□ -0.84
UBE3D-206ENST00000505226 PDLIM3Q53GG5 364 aaPredicted RBP9.82□□□□□ -0.84
UBE3D-206ENST00000505226 PRAMEF5Q5TYX0 476 aa9.82□□□□□ -0.84
UBE3D-206ENST00000505226 FAM90A1Q86YD7 464 aa9.82□□□□□ -0.84
UBE3D-206ENST00000505226 PRR7Q8TB68 274 aa9.82□□□□□ -0.84
UBE3D-206ENST00000505226 HSPB9Q9BQS6 159 aa9.82□□□□□ -0.84
UBE3D-206ENST00000505226 J3QW42 95 aa9.82□□□□□ -0.84
UBE3D-206ENST00000505226 GCHFRP30047 84 aa9.82□□□□□ -0.84
UBE3D-206ENST00000505226 MRPL49Q13405 166 aaKnown RBP9.82□□□□□ -0.84
UBE3D-206ENST00000505226 EFNB3Q15768 340 aa9.82□□□□□ -0.84
UBE3D-206ENST00000505226 TEX43Q6ZNM6 134 aa9.82□□□□□ -0.84
UBE3D-206ENST00000505226 WDR31Q8NA23 367 aa9.82□□□□□ -0.84
UBE3D-206ENST00000505226 TMEM68Q96MH6 324 aa9.82□□□□□ -0.84
UBE3D-206ENST00000505226 CDX2Q99626 313 aaPredicted RBP9.82□□□□□ -0.84
UBE3D-206ENST00000505226 IL6RP08887 468 aaPredicted RBP9.81□□□□□ -0.84
UBE3D-206ENST00000505226 MYOD1P15172 320 aa9.81□□□□□ -0.84
UBE3D-206ENST00000505226 GPR12P47775 334 aa9.81□□□□□ -0.84
UBE3D-206ENST00000505226 ATP1A1-AS1Q5TC04 95 aa9.81□□□□□ -0.84
UBE3D-206ENST00000505226 IL36BQ9NZH7 164 aa9.81□□□□□ -0.84
UBE3D-206ENST00000505226 DCHS1Q96JQ0 3298 aa9.81□□□□□ -0.84
UBE3D-206ENST00000505226 MPDU1O75352 247 aa9.81□□□□□ -0.84
UBE3D-206ENST00000505226 BTF3P20290 206 aaKnown RBP9.81□□□□□ -0.84
UBE3D-206ENST00000505226 LGALS4P56470 323 aa9.81□□□□□ -0.84
UBE3D-206ENST00000505226 MORN2Q502X0 79 aa9.81□□□□□ -0.84
UBE3D-206ENST00000505226 OR4A16Q8NH70 328 aa9.81□□□□□ -0.84
UBE3D-206ENST00000505226 PAM16Q9Y3D7 125 aa9.81□□□□□ -0.84
UBE3D-206ENST00000505226 M0R1X1 148 aa9.81□□□□□ -0.84
UBE3D-206ENST00000505226 ESDP10768 282 aa9.81□□□□□ -0.84
UBE3D-206ENST00000505226 CRISP2P16562 243 aa9.81□□□□□ -0.84
UBE3D-206ENST00000505226 IER3P46695 156 aa9.81□□□□□ -0.84
UBE3D-206ENST00000505226 FABP6P51161 128 aa9.81□□□□□ -0.84
UBE3D-206ENST00000505226 ARG2P78540 354 aa9.81□□□□□ -0.84
UBE3D-206ENST00000505226 LEAP2Q969E1 77 aa9.81□□□□□ -0.84
UBE3D-206ENST00000505226 PARD6AQ9NPB6 346 aa9.81□□□□□ -0.84
UBE3D-206ENST00000505226 HTD2P86397 168 aa9.8□□□□□ -0.84
UBE3D-206ENST00000505226 STPG3Q8N7X2 389 aa9.8□□□□□ -0.84
UBE3D-206ENST00000505226 ST6GALNAC3Q8NDV1 305 aa9.8□□□□□ -0.84
UBE3D-206ENST00000505226 OR1L6Q8NGR2 347 aa9.8□□□□□ -0.84
UBE3D-206ENST00000505226 VN1R17PQ8TDU5 208 aa9.8□□□□□ -0.84
UBE3D-206ENST00000505226 FAM122AQ96E09 287 aa9.8□□□□□ -0.84
UBE3D-206ENST00000505226 LRFN3Q9BTN0 628 aa9.8□□□□□ -0.84
UBE3D-206ENST00000505226 TMEM208Q9BTX3 173 aa9.8□□□□□ -0.84
UBE3D-206ENST00000505226 CXXC4Q9H2H0 198 aa9.8□□□□□ -0.84
UBE3D-206ENST00000505226 ABI3Q9P2A4 366 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms