RNA–Protein interactions for RNA: ENST00000505066.5

DDR1-256, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 4

Gene DDR1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-256	ENST00000505066	TMEM235	A6NFC5	223 aa		12.44	□□□□□ -0.42
DDR1-256	ENST00000505066	NPIPB5	A8MRT5	1133 aa		12.44	□□□□□ -0.42
DDR1-256	ENST00000505066	BMPR1B	O00238	502 aa		12.44	□□□□□ -0.42
DDR1-256	ENST00000505066	CD300E	Q496F6	205 aa	Predicted RBP	12.44	□□□□□ -0.42
DDR1-256	ENST00000505066	MFSD4A	Q8N468	514 aa		12.44	□□□□□ -0.42
DDR1-256	ENST00000505066	TMEM167A	Q8TBQ9	72 aa		12.44	□□□□□ -0.42
DDR1-256	ENST00000505066	SECTM1	Q8WVN6	248 aa		12.44	□□□□□ -0.42
DDR1-256	ENST00000505066	C5orf30	Q96GV9	206 aa		12.44	□□□□□ -0.42
DDR1-256	ENST00000505066	COMMD5	Q9GZQ3	224 aa		12.44	□□□□□ -0.42
DDR1-256	ENST00000505066	TXNL4B	Q9NX01	149 aa	Known RBP	12.44	□□□□□ -0.42
DDR1-256	ENST00000505066	RHBDL2	Q9NX52	303 aa		12.44	□□□□□ -0.42
DDR1-256	ENST00000505066	ETV7	Q9Y603	341 aa		12.44	□□□□□ -0.42
DDR1-256	ENST00000505066	KMT2C	Q8NEZ4	4911 aa	Known RBP	12.44	□□□□□ -0.42
DDR1-256	ENST00000505066	DNAH9	Q9NYC9	4486 aa		12.43	□□□□□ -0.42
DDR1-256	ENST00000505066	TRBV7-1	A0A0A6YYK4	115 aa		12.43	□□□□□ -0.42
DDR1-256	ENST00000505066	OR11H12	B2RN74	326 aa		12.43	□□□□□ -0.42
DDR1-256	ENST00000505066	LGALS9	O00182	355 aa		12.43	□□□□□ -0.42
DDR1-256	ENST00000505066	OR2C1	O95371	312 aa		12.43	□□□□□ -0.42
DDR1-256	ENST00000505066	FOLR2	P14207	255 aa		12.43	□□□□□ -0.42
DDR1-256	ENST00000505066	CBX5	P45973	191 aa		12.43	□□□□□ -0.42
DDR1-256	ENST00000505066	SCAND1	P57086	179 aa		12.43	□□□□□ -0.42
DDR1-256	ENST00000505066	UBE2U	Q5VVX9	321 aa		12.43	□□□□□ -0.42
DDR1-256	ENST00000505066	SSX9	Q7RTT3	188 aa		12.43	□□□□□ -0.42
DDR1-256	ENST00000505066	VKORC1L1	Q8N0U8	176 aa		12.43	□□□□□ -0.42
DDR1-256	ENST00000505066	BEST4	Q8NFU0	473 aa		12.43	□□□□□ -0.42
DDR1-256	ENST00000505066	CD300LF	Q8TDQ1	290 aa		12.43	□□□□□ -0.42
DDR1-256	ENST00000505066	YTHDF1	Q9BYJ9	559 aa	Known RBP	12.43	□□□□□ -0.42
DDR1-256	ENST00000505066	SRD5A3	Q9H8P0	318 aa		12.43	□□□□□ -0.42
DDR1-256	ENST00000505066	TRAV18	A0A075B6X5	111 aa		12.42	□□□□□ -0.42
DDR1-256	ENST00000505066	IGKV1D-8	A0A087WSZ0	117 aa		12.42	□□□□□ -0.42
DDR1-256	ENST00000505066		A0A0A6YYH2	397 aa		12.42	□□□□□ -0.42
DDR1-256	ENST00000505066	HMX3	A6NHT5	357 aa		12.42	□□□□□ -0.42
DDR1-256	ENST00000505066		A6NJ64	397 aa		12.42	□□□□□ -0.42
DDR1-256	ENST00000505066	C2orf70	A6NJV1	201 aa		12.42	□□□□□ -0.42
DDR1-256	ENST00000505066	HLA-G	P17693	338 aa		12.42	□□□□□ -0.42
DDR1-256	ENST00000505066	PSMB6	P28072	239 aa		12.42	□□□□□ -0.42
DDR1-256	ENST00000505066	HERV-K104	P61576	105 aa		12.42	□□□□□ -0.42
DDR1-256	ENST00000505066	ERVK-16	P61578	105 aa		12.42	□□□□□ -0.42
DDR1-256	ENST00000505066	MSMO1	Q15800	293 aa		12.42	□□□□□ -0.42
DDR1-256	ENST00000505066	DEFB114	Q30KQ6	69 aa		12.42	□□□□□ -0.42
DDR1-256	ENST00000505066	C10orf55	Q5SWW7	151 aa		12.42	□□□□□ -0.42
DDR1-256	ENST00000505066	ZNF57	Q68EA5	555 aa	Predicted RBP	12.42	□□□□□ -0.42
DDR1-256	ENST00000505066	SFXN4	Q6P4A7	337 aa		12.42	□□□□□ -0.42
DDR1-256	ENST00000505066	CLEC19A	Q6UXS0	136 aa		12.42	□□□□□ -0.42
DDR1-256	ENST00000505066	RBPMS2	Q6ZRY4	209 aa	Known RBP	12.42	□□□□□ -0.42
DDR1-256	ENST00000505066	GPHB5	Q86YW7	130 aa		12.42	□□□□□ -0.42
DDR1-256	ENST00000505066	OR52B4	Q8NGK2	314 aa		12.42	□□□□□ -0.42
DDR1-256	ENST00000505066	EDA2R	Q9HAV5	297 aa		12.42	□□□□□ -0.42
DDR1-256	ENST00000505066	ADAM30	Q9UKF2	790 aa		12.42	□□□□□ -0.42
DDR1-256	ENST00000505066	PPP5D1	E7EU14	171 aa		12.41	□□□□□ -0.42
DDR1-256	ENST00000505066	FCGR2C	P31995	323 aa		12.41	□□□□□ -0.42
DDR1-256	ENST00000505066	ZNF45	Q02386	682 aa		12.41	□□□□□ -0.42
DDR1-256	ENST00000505066	IDNK	Q5T6J7	187 aa		12.41	□□□□□ -0.42
DDR1-256	ENST00000505066	SLC38A6	Q8IZM9	456 aa		12.41	□□□□□ -0.42
DDR1-256	ENST00000505066	SPAG16	Q8N0X2	631 aa		12.41	□□□□□ -0.42
DDR1-256	ENST00000505066	DMBX1	Q8NFW5	382 aa		12.41	□□□□□ -0.42
DDR1-256	ENST00000505066	TSPAN14	Q8NG11	270 aa		12.41	□□□□□ -0.42
DDR1-256	ENST00000505066	LGALS14	Q8TCE9	139 aa		12.41	□□□□□ -0.42
DDR1-256	ENST00000505066	MARC2	Q969Z3	335 aa		12.41	□□□□□ -0.42
DDR1-256	ENST00000505066	SLC5A7	Q9GZV3	580 aa		12.41	□□□□□ -0.42
DDR1-256	ENST00000505066	IFT46	Q9NQC8	304 aa		12.41	□□□□□ -0.42
DDR1-256	ENST00000505066	ELF5	Q9UKW6	265 aa	Predicted RBP	12.41	□□□□□ -0.42
DDR1-256	ENST00000505066	LOC100506127	A0A0U1RQW1	187 aa		12.4	□□□□□ -0.42
DDR1-256	ENST00000505066	IZUMO1R	A6ND01	250 aa		12.4	□□□□□ -0.42
DDR1-256	ENST00000505066	TNFSF12	O43508	249 aa		12.4	□□□□□ -0.42
DDR1-256	ENST00000505066	MYOD1	P15172	320 aa		12.4	□□□□□ -0.42
DDR1-256	ENST00000505066	NQO2	P16083	231 aa		12.4	□□□□□ -0.42
DDR1-256	ENST00000505066	S100G	P29377	79 aa		12.4	□□□□□ -0.42
DDR1-256	ENST00000505066	TAS2R31	P59538	309 aa		12.4	□□□□□ -0.42
DDR1-256	ENST00000505066	RPL30	P62888	115 aa	Known RBP	12.4	□□□□□ -0.42
DDR1-256	ENST00000505066	MXD1	Q05195	221 aa		12.4	□□□□□ -0.42
DDR1-256	ENST00000505066	SPART	Q8N0X7	666 aa		12.4	□□□□□ -0.42
DDR1-256	ENST00000505066	OR13F1	Q8NGS4	319 aa		12.4	□□□□□ -0.42
DDR1-256	ENST00000505066	BET1L	Q9NYM9	111 aa		12.4	□□□□□ -0.42
DDR1-256	ENST00000505066	UFC1	Q9Y3C8	167 aa		12.4	□□□□□ -0.42
DDR1-256	ENST00000505066	IGKV1D-13	A0A0B4J2D9	117 aa		12.39	□□□□□ -0.43
DDR1-256	ENST00000505066	RBFOX2	O43251	390 aa	Known RBP eCLIP	12.39	□□□□□ -0.43
DDR1-256	ENST00000505066	TMEM127	O75204	238 aa		12.39	□□□□□ -0.43
DDR1-256	ENST00000505066	HPRT1	P00492	218 aa		12.39	□□□□□ -0.43
DDR1-256	ENST00000505066	HLA-A	P01891	365 aa	Known RBP	12.39	□□□□□ -0.43
DDR1-256	ENST00000505066	ZNF735	P0CB33	412 aa		12.39	□□□□□ -0.43
DDR1-256	ENST00000505066	IGKV1-13	P0DP09	117 aa		12.39	□□□□□ -0.43
DDR1-256	ENST00000505066	CBLN1	P23435	193 aa		12.39	□□□□□ -0.43
DDR1-256	ENST00000505066	FXYD4	P59646	89 aa		12.39	□□□□□ -0.43
DDR1-256	ENST00000505066	MRGPRG-AS1	Q2M3A8	158 aa		12.39	□□□□□ -0.43
DDR1-256	ENST00000505066	TIMM50	Q3ZCQ8	353 aa		12.39	□□□□□ -0.43
DDR1-256	ENST00000505066	AADACL3	Q5VUY0	350 aa		12.39	□□□□□ -0.43
DDR1-256	ENST00000505066	THOC7	Q6I9Y2	204 aa	Known RBP	12.39	□□□□□ -0.43
DDR1-256	ENST00000505066	PLET1	Q6UQ28	207 aa		12.39	□□□□□ -0.43
DDR1-256	ENST00000505066	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	12.39	□□□□□ -0.43
DDR1-256	ENST00000505066	CROCCP3	Q8IVE0	287 aa		12.39	□□□□□ -0.43
DDR1-256	ENST00000505066	PUSL1	Q8N0Z8	303 aa	Known RBP	12.39	□□□□□ -0.43
DDR1-256	ENST00000505066	DEFB125	Q8N687	156 aa		12.39	□□□□□ -0.43
DDR1-256	ENST00000505066	SRSF8	Q9BRL6	282 aa	Known RBP	12.39	□□□□□ -0.43
DDR1-256	ENST00000505066	TEX22	C9J3V5	150 aa		12.38	□□□□□ -0.43
DDR1-256	ENST00000505066	PPY	P01298	95 aa		12.38	□□□□□ -0.43
DDR1-256	ENST00000505066	IGHV3-23	P01764	117 aa		12.38	□□□□□ -0.43
DDR1-256	ENST00000505066	CRYGC	P07315	174 aa		12.38	□□□□□ -0.43
DDR1-256	ENST00000505066	SDC2	P34741	201 aa		12.38	□□□□□ -0.43
DDR1-256	ENST00000505066	MECP2	P51608	486 aa	Known RBP	12.38	□□□□□ -0.43

Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms