RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 NECAP1Q8NC96 275 aa4.41□□□□□ -1.7
GYPB-204ENST00000504951 SETD9Q8NE22 299 aa4.41□□□□□ -1.7
GYPB-204ENST00000504951 BPIFB6Q8NFQ5 453 aa4.41□□□□□ -1.7
GYPB-204ENST00000504951 OR6M1Q8NGM8 313 aa4.41□□□□□ -1.7
GYPB-204ENST00000504951 MAFIPQ8WZ33 124 aa4.41□□□□□ -1.7
GYPB-204ENST00000504951 PHYHIPQ92561 330 aa4.41□□□□□ -1.7
GYPB-204ENST00000504951 THRSPQ92748 146 aa4.41□□□□□ -1.7
GYPB-204ENST00000504951 TMEM203Q969S6 136 aa4.41□□□□□ -1.7
GYPB-204ENST00000504951 GALNT14Q96FL9 552 aa4.41□□□□□ -1.7
GYPB-204ENST00000504951 SPAG8Q99932 426 aaPredicted RBP4.41□□□□□ -1.7
GYPB-204ENST00000504951 RNF126Q9BV68 326 aa4.41□□□□□ -1.7
GYPB-204ENST00000504951 PECRQ9BY49 303 aa4.41□□□□□ -1.7
GYPB-204ENST00000504951 RIMS4Q9H426 269 aaPredicted RBP4.41□□□□□ -1.7
GYPB-204ENST00000504951 C5orf66Q9H5L9 145 aa4.41□□□□□ -1.7
GYPB-204ENST00000504951 MAP6D1Q9H9H5 199 aa4.41□□□□□ -1.7
GYPB-204ENST00000504951 AKIP1Q9NQ31 210 aa4.41□□□□□ -1.7
GYPB-204ENST00000504951 C12orf4Q9NQ89 552 aa4.41□□□□□ -1.7
GYPB-204ENST00000504951 PLCXD1Q9NUJ7 323 aa4.41□□□□□ -1.7
GYPB-204ENST00000504951 COA4Q9NYJ1 87 aa4.41□□□□□ -1.7
GYPB-204ENST00000504951 ZNF221Q9UK13 617 aa4.41□□□□□ -1.7
GYPB-204ENST00000504951 HSF4Q9ULV5 492 aa4.41□□□□□ -1.7
GYPB-204ENST00000504951 AK6Q9Y3D8 172 aaKnown RBP4.41□□□□□ -1.7
GYPB-204ENST00000504951 DMBT1Q9UGM3 2413 aaPredicted RBP4.41□□□□□ -1.7
GYPB-204ENST00000504951 TMEM213A2RRL7 107 aa4.4□□□□□ -1.71
GYPB-204ENST00000504951 LINC00473A8K010 186 aa4.4□□□□□ -1.71
GYPB-204ENST00000504951 TRDCB7Z8K6 153 aa4.4□□□□□ -1.71
GYPB-204ENST00000504951 PPP5D1E7EU14 171 aa4.4□□□□□ -1.71
GYPB-204ENST00000504951 SLC17A2O00624 439 aa4.4□□□□□ -1.71
GYPB-204ENST00000504951 TSPAN4O14817 238 aa4.4□□□□□ -1.71
GYPB-204ENST00000504951 BET1O15155 118 aa4.4□□□□□ -1.71
GYPB-204ENST00000504951 SHOXO15266 292 aa4.4□□□□□ -1.71
GYPB-204ENST00000504951 APOA2P02652 100 aa4.4□□□□□ -1.71
GYPB-204ENST00000504951 CDK1P06493 297 aa4.4□□□□□ -1.71
GYPB-204ENST00000504951 OR9G9P0C7N8 305 aa4.4□□□□□ -1.71
GYPB-204ENST00000504951 P0DMU3 169 aa4.4□□□□□ -1.71
GYPB-204ENST00000504951 FAM231AP0DMU4 169 aa4.4□□□□□ -1.71
GYPB-204ENST00000504951 FAM231CP0DMU5 169 aa4.4□□□□□ -1.71
GYPB-204ENST00000504951 PSMB6P28072 239 aa4.4□□□□□ -1.71
GYPB-204ENST00000504951 MFAP2P55001 183 aa4.4□□□□□ -1.71
GYPB-204ENST00000504951 CMC4P56277 68 aaPredicted RBP4.4□□□□□ -1.71
GYPB-204ENST00000504951 NANOS2P60321 138 aaKnown RBP4.4□□□□□ -1.71
GYPB-204ENST00000504951 RPS25P62851 125 aaKnown RBP4.4□□□□□ -1.71
GYPB-204ENST00000504951 RHOGP84095 191 aa4.4□□□□□ -1.71
GYPB-204ENST00000504951 ATP5G2Q06055 141 aa4.4□□□□□ -1.71
GYPB-204ENST00000504951 MED21Q13503 144 aa4.4□□□□□ -1.71
GYPB-204ENST00000504951 PRSS8Q16651 343 aa4.4□□□□□ -1.71
GYPB-204ENST00000504951 DEFB135Q30KP9 77 aa4.4□□□□□ -1.71
GYPB-204ENST00000504951 FAM106AQ4KMX7 169 aa4.4□□□□□ -1.71
GYPB-204ENST00000504951 LIPKQ5VXJ0 399 aa4.4□□□□□ -1.71
GYPB-204ENST00000504951 C8orf59Q8N0T1 100 aaPredicted RBP4.4□□□□□ -1.71
GYPB-204ENST00000504951 TTC9CQ8N5M4 171 aa4.4□□□□□ -1.71
GYPB-204ENST00000504951 MS4A15Q8N5U1 240 aa4.4□□□□□ -1.71
GYPB-204ENST00000504951 SRSF12Q8WXF0 261 aaKnown RBP4.4□□□□□ -1.71
GYPB-204ENST00000504951 CACNG8Q8WXS5 425 aa4.4□□□□□ -1.71
GYPB-204ENST00000504951 HARBI1Q96MB7 349 aa4.4□□□□□ -1.71
GYPB-204ENST00000504951 CMSS1Q9BQ75 279 aaKnown RBP4.4□□□□□ -1.71
GYPB-204ENST00000504951 OR2D2Q9H210 308 aa4.4□□□□□ -1.71
GYPB-204ENST00000504951 MRPL27Q9P0M9 148 aaKnown RBP4.4□□□□□ -1.71
GYPB-204ENST00000504951 S4R3C0 116 aa4.4□□□□□ -1.71
GYPB-204ENST00000504951 APOBP04114 4563 aaKnown RBP4.39□□□□□ -1.71
GYPB-204ENST00000504951 TRBV6-7A0A0A0MS04 114 aa4.39□□□□□ -1.71
GYPB-204ENST00000504951 A0A1B0GW64 132 aa4.39□□□□□ -1.71
GYPB-204ENST00000504951 E7EUB6 86 aa4.39□□□□□ -1.71
GYPB-204ENST00000504951 PTGES3LE9PB15 166 aa4.39□□□□□ -1.71
GYPB-204ENST00000504951 FABP7O15540 132 aa4.39□□□□□ -1.71
GYPB-204ENST00000504951 TUSC2O75896 110 aa4.39□□□□□ -1.71
GYPB-204ENST00000504951 OR2J3O76001 311 aa4.39□□□□□ -1.71
GYPB-204ENST00000504951 CRYZL1O95825 349 aa4.39□□□□□ -1.71
GYPB-204ENST00000504951 FCGR3AP08637 254 aa4.39□□□□□ -1.71
GYPB-204ENST00000504951 CTRB1P17538 263 aa4.39□□□□□ -1.71
GYPB-204ENST00000504951 DUTP33316 252 aaKnown RBP4.39□□□□□ -1.71
GYPB-204ENST00000504951 EXOSC2Q13868 293 aaKnown RBP4.39□□□□□ -1.71
GYPB-204ENST00000504951 IRF3Q14653 427 aa4.39□□□□□ -1.71
GYPB-204ENST00000504951 SPHARQ15513 63 aa4.39□□□□□ -1.71
GYPB-204ENST00000504951 MED22Q15528 200 aa4.39□□□□□ -1.71
GYPB-204ENST00000504951 TNXAQ16473 311 aa4.39□□□□□ -1.71
GYPB-204ENST00000504951 C2orf76Q3KRA6 126 aa4.39□□□□□ -1.71
GYPB-204ENST00000504951 PVRIGQ6DKI7 326 aa4.39□□□□□ -1.71
GYPB-204ENST00000504951 CTRB2Q6GPI1 263 aa4.39□□□□□ -1.71
GYPB-204ENST00000504951 SLC25A42Q86VD7 318 aa4.39□□□□□ -1.71
GYPB-204ENST00000504951 C10orf67Q8IYJ2 551 aa4.39□□□□□ -1.71
GYPB-204ENST00000504951 PACRGLQ8N7B6 248 aa4.39□□□□□ -1.71
GYPB-204ENST00000504951 MAPKAPK5-AS1Q8N8E1 139 aa4.39□□□□□ -1.71
GYPB-204ENST00000504951 TEX45Q8NA69 505 aa4.39□□□□□ -1.71
GYPB-204ENST00000504951 UXS1Q8NBZ7 420 aa4.39□□□□□ -1.71
GYPB-204ENST00000504951 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.39□□□□□ -1.71
GYPB-204ENST00000504951 OR4A4PQ8NGN8 299 aa4.39□□□□□ -1.71
GYPB-204ENST00000504951 OR1L6Q8NGR2 347 aa4.39□□□□□ -1.71
GYPB-204ENST00000504951 ACOT12Q8WYK0 555 aa4.39□□□□□ -1.71
GYPB-204ENST00000504951 FAM3DQ96BQ1 224 aa4.39□□□□□ -1.71
GYPB-204ENST00000504951 PHB2Q99623 299 aa4.39□□□□□ -1.71
GYPB-204ENST00000504951 RARRES2Q99969 163 aa4.39□□□□□ -1.71
GYPB-204ENST00000504951 URM1Q9BTM9 101 aaKnown RBP4.39□□□□□ -1.71
GYPB-204ENST00000504951 CABLES2Q9BTV7 478 aa4.39□□□□□ -1.71
GYPB-204ENST00000504951 MND1Q9BWT6 205 aa4.39□□□□□ -1.71
GYPB-204ENST00000504951 CSTL1Q9H114 145 aa4.39□□□□□ -1.71
GYPB-204ENST00000504951 ZNF430Q9H8G1 570 aaPredicted RBP4.39□□□□□ -1.71
GYPB-204ENST00000504951 PLGRKTQ9HBL7 147 aa4.39□□□□□ -1.71
GYPB-204ENST00000504951 MLXQ9UH92 298 aa4.39□□□□□ -1.71
GYPB-204ENST00000504951 ELF5Q9UKW6 265 aaPredicted RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms