RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 RUNX1Q01196 453 aa8.03□□□□□ -1.12
COL1A1-210ENST00000504289 RHEBQ15382 184 aa8.03□□□□□ -1.12
COL1A1-210ENST00000504289 TMEM177Q53S58 311 aa8.03□□□□□ -1.12
COL1A1-210ENST00000504289 OR8G2PQ6IF36 304 aa8.03□□□□□ -1.12
COL1A1-210ENST00000504289 OR4A47Q6IF82 309 aa8.03□□□□□ -1.12
COL1A1-210ENST00000504289 ATRAIDQ6UW56 229 aa8.03□□□□□ -1.12
COL1A1-210ENST00000504289 UNQ6494/PRO21346Q6UXR6 183 aa8.03□□□□□ -1.12
COL1A1-210ENST00000504289 RBMS3Q6XE24 437 aaKnown RBP8.03□□□□□ -1.12
COL1A1-210ENST00000504289 PDPNQ86YL7 162 aa8.03□□□□□ -1.12
COL1A1-210ENST00000504289 OR9G1Q8NH87 305 aa8.03□□□□□ -1.12
COL1A1-210ENST00000504289 C8orf46Q8TAG6 207 aa8.03□□□□□ -1.12
COL1A1-210ENST00000504289 NEU4Q8WWR8 484 aaPredicted RBP8.03□□□□□ -1.12
COL1A1-210ENST00000504289 MS4A7Q9GZW8 240 aaPredicted RBP8.03□□□□□ -1.12
COL1A1-210ENST00000504289 TMEM231Q9H6L2 316 aa8.03□□□□□ -1.12
COL1A1-210ENST00000504289 ENY2Q9NPA8 101 aa8.03□□□□□ -1.12
COL1A1-210ENST00000504289 HEYLQ9NQ87 328 aaPredicted RBP8.03□□□□□ -1.12
COL1A1-210ENST00000504289 SLC35D1Q9NTN3 355 aa8.03□□□□□ -1.12
COL1A1-210ENST00000504289 DCAF16Q9NXF7 216 aa8.03□□□□□ -1.12
COL1A1-210ENST00000504289 MIOXQ9UGB7 285 aa8.03□□□□□ -1.12
COL1A1-210ENST00000504289 TCF19Q9Y242 345 aa8.03□□□□□ -1.12
COL1A1-210ENST00000504289 WDR83OSQ9Y284 106 aa8.03□□□□□ -1.12
COL1A1-210ENST00000504289 HCFC1P51610 2035 aa8.02□□□□□ -1.13
COL1A1-210ENST00000504289 RAI1Q7Z5J4 1906 aaPredicted RBP8.02□□□□□ -1.13
COL1A1-210ENST00000504289 CTXND1A0A1B0GTU2 59 aa8.02□□□□□ -1.13
COL1A1-210ENST00000504289 J3QR06 171 aa8.02□□□□□ -1.13
COL1A1-210ENST00000504289 UPK2O00526 184 aa8.02□□□□□ -1.13
COL1A1-210ENST00000504289 KBTBD11O94819 623 aa8.02□□□□□ -1.13
COL1A1-210ENST00000504289 GOSR1O95249 250 aa8.02□□□□□ -1.13
COL1A1-210ENST00000504289 IFNA10P01566 189 aa8.02□□□□□ -1.13
COL1A1-210ENST00000504289 IGHV2-70P01814 119 aa8.02□□□□□ -1.13
COL1A1-210ENST00000504289 CD1BP29016 333 aa8.02□□□□□ -1.13
COL1A1-210ENST00000504289 TFF3Q07654 80 aa8.02□□□□□ -1.13
COL1A1-210ENST00000504289 SOHLH1Q5JUK2 328 aa8.02□□□□□ -1.13
COL1A1-210ENST00000504289 TGIF2LYQ8IUE0 185 aa8.02□□□□□ -1.13
COL1A1-210ENST00000504289 ZCCHC24Q8N2G6 241 aaKnown RBP8.02□□□□□ -1.13
COL1A1-210ENST00000504289 OR13D1Q8NGV5 346 aa8.02□□□□□ -1.13
COL1A1-210ENST00000504289 CLDND2Q8NHS1 167 aa8.02□□□□□ -1.13
COL1A1-210ENST00000504289 LINC01560Q8TB33 94 aa8.02□□□□□ -1.13
COL1A1-210ENST00000504289 RAB1CQ92928 201 aa8.02□□□□□ -1.13
COL1A1-210ENST00000504289 ST6GALNAC6Q969X2 333 aa8.02□□□□□ -1.13
COL1A1-210ENST00000504289 RCC1LQ96I51 464 aaKnown RBP8.02□□□□□ -1.13
COL1A1-210ENST00000504289 ACTR3CQ9C0K3 210 aaPredicted RBP8.02□□□□□ -1.13
COL1A1-210ENST00000504289 SMCO4Q9NRQ5 59 aa8.02□□□□□ -1.13
COL1A1-210ENST00000504289 CBLN4Q9NTU7 201 aa8.02□□□□□ -1.13
COL1A1-210ENST00000504289 SLC39A9Q9NUM3 307 aa8.02□□□□□ -1.13
COL1A1-210ENST00000504289 TMA7Q9Y2S6 64 aaKnown RBP8.02□□□□□ -1.13
COL1A1-210ENST00000504289 PKDREJQ9NTG1 2253 aa8.01□□□□□ -1.13
COL1A1-210ENST00000504289 DIDO1Q9BTC0 2240 aaKnown RBP8.01□□□□□ -1.13
COL1A1-210ENST00000504289 UBE2L5PA0A1B0GUS4 154 aa8.01□□□□□ -1.13
COL1A1-210ENST00000504289 LOC102723971A0A1B0GUV8 181 aa8.01□□□□□ -1.13
COL1A1-210ENST00000504289 C9JQL5 133 aa8.01□□□□□ -1.13
COL1A1-210ENST00000504289 ATXN7O15265 892 aaPredicted RBP8.01□□□□□ -1.13
COL1A1-210ENST00000504289 CYB5BO43169 146 aa8.01□□□□□ -1.13
COL1A1-210ENST00000504289 MMP23AO75900 390 aa8.01□□□□□ -1.13
COL1A1-210ENST00000504289 TSPAN9O75954 239 aa8.01□□□□□ -1.13
COL1A1-210ENST00000504289 C1QTNF9P0C862 333 aa8.01□□□□□ -1.13
COL1A1-210ENST00000504289 CTRB1P17538 263 aa8.01□□□□□ -1.13
COL1A1-210ENST00000504289 FGF7P21781 194 aa8.01□□□□□ -1.13
COL1A1-210ENST00000504289 USF1P22415 310 aaPredicted RBP8.01□□□□□ -1.13
COL1A1-210ENST00000504289 OPRK1P41145 380 aa8.01□□□□□ -1.13
COL1A1-210ENST00000504289 LGALS7P47929 136 aa8.01□□□□□ -1.13
COL1A1-210ENST00000504289 HOXA1P49639 335 aaPredicted RBP8.01□□□□□ -1.13
COL1A1-210ENST00000504289 PRRX1P54821 245 aa8.01□□□□□ -1.13
COL1A1-210ENST00000504289 LINC00205P59089 165 aa8.01□□□□□ -1.13
COL1A1-210ENST00000504289 PRCDQ00LT1 54 aa8.01□□□□□ -1.13
COL1A1-210ENST00000504289 RAB31Q13636 194 aa8.01□□□□□ -1.13
COL1A1-210ENST00000504289 ACOT6Q3I5F7 207 aaPredicted RBP8.01□□□□□ -1.13
COL1A1-210ENST00000504289 ZNF787Q6DD87 383 aa8.01□□□□□ -1.13
COL1A1-210ENST00000504289 CTRB2Q6GPI1 263 aa8.01□□□□□ -1.13
COL1A1-210ENST00000504289 LYPD2Q6UXB3 125 aa8.01□□□□□ -1.13
COL1A1-210ENST00000504289 ETV3LQ6ZN32 361 aa8.01□□□□□ -1.13
COL1A1-210ENST00000504289 C1orf229Q6ZS94 237 aaPredicted RBP8.01□□□□□ -1.13
COL1A1-210ENST00000504289 DTX2Q86UW9 622 aa8.01□□□□□ -1.13
COL1A1-210ENST00000504289 OR4C13Q8NGP0 309 aa8.01□□□□□ -1.13
COL1A1-210ENST00000504289 OR10X1Q8NGY0 326 aa8.01□□□□□ -1.13
COL1A1-210ENST00000504289 H1FXQ92522 213 aaKnown RBP8.01□□□□□ -1.13
COL1A1-210ENST00000504289 NEUROG1Q92886 237 aa8.01□□□□□ -1.13
COL1A1-210ENST00000504289 LHX4Q969G2 390 aa8.01□□□□□ -1.13
COL1A1-210ENST00000504289 ZDHHC16Q969W1 377 aa8.01□□□□□ -1.13
COL1A1-210ENST00000504289 TIMD4Q96H15 378 aa8.01□□□□□ -1.13
COL1A1-210ENST00000504289 RSG1Q9BU20 258 aa8.01□□□□□ -1.13
COL1A1-210ENST00000504289 NPCDR1Q9BY65 106 aa8.01□□□□□ -1.13
COL1A1-210ENST00000504289 CTSZQ9UBR2 303 aa8.01□□□□□ -1.13
COL1A1-210ENST00000504289 BSNQ9UPA5 3926 aa8□□□□□ -1.13
COL1A1-210ENST00000504289 MEX3AA1L020 520 aaKnown RBP8□□□□□ -1.13
COL1A1-210ENST00000504289 MAP1LC3B2A6NCE7 125 aa8□□□□□ -1.13
COL1A1-210ENST00000504289 B4DEV8 164 aa8□□□□□ -1.13
COL1A1-210ENST00000504289 SEC14L6B5MCN3 397 aa8□□□□□ -1.13
COL1A1-210ENST00000504289 PRSS46E5RG02 174 aa8□□□□□ -1.13
COL1A1-210ENST00000504289 H0YJW9 148 aa8□□□□□ -1.13
COL1A1-210ENST00000504289 TSPAN4O14817 238 aa8□□□□□ -1.13
COL1A1-210ENST00000504289 SIAH2O43255 324 aa8□□□□□ -1.13
COL1A1-210ENST00000504289 FCN3O75636 299 aa8□□□□□ -1.13
COL1A1-210ENST00000504289 SRP19P09132 144 aaKnown RBP8□□□□□ -1.13
COL1A1-210ENST00000504289 IGHV1-8P0DP01 117 aa8□□□□□ -1.13
COL1A1-210ENST00000504289 BCL2P10415 239 aa8□□□□□ -1.13
COL1A1-210ENST00000504289 GNG10P50151 68 aa8□□□□□ -1.13
COL1A1-210ENST00000504289 CTAG1AP78358 180 aa8□□□□□ -1.13
COL1A1-210ENST00000504289 CCL20P78556 96 aa8□□□□□ -1.13
COL1A1-210ENST00000504289 ICAM4Q14773 271 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms