RNA–Protein interactions for RNA: ENST00000503923.1

VCAN-205, Transcript of versican, humanhuman

TSL 4

Gene VCAN, Length 498 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-205ENST00000503923 R3HDM4Q96D70 268 aa8.76□□□□□ -1.01
VCAN-205ENST00000503923 SLC25A21Q9BQT8 299 aaPredicted RBP8.76□□□□□ -1.01
VCAN-205ENST00000503923 ZNF430Q9H8G1 570 aaPredicted RBP8.76□□□□□ -1.01
VCAN-205ENST00000503923 BET1LQ9NYM9 111 aa8.76□□□□□ -1.01
VCAN-205ENST00000503923 VSIG4Q9Y279 399 aa8.76□□□□□ -1.01
VCAN-205ENST00000503923 TRAV41A0A0B4J266 112 aa8.75□□□□□ -1.01
VCAN-205ENST00000503923 TEX13DA0A0J9YY54 714 aaPredicted RBP8.75□□□□□ -1.01
VCAN-205ENST00000503923 CRYM-AS1A6NIL9 109 aa8.75□□□□□ -1.01
VCAN-205ENST00000503923 MARCH11A6NNE9 402 aa8.75□□□□□ -1.01
VCAN-205ENST00000503923 ARPC1BO15143 372 aaKnown RBP8.75□□□□□ -1.01
VCAN-205ENST00000503923 SERPINE2P07093 398 aa8.75□□□□□ -1.01
VCAN-205ENST00000503923 CD28P10747 220 aa8.75□□□□□ -1.01
VCAN-205ENST00000503923 CFHR3Q02985 330 aa8.75□□□□□ -1.01
VCAN-205ENST00000503923 RBMS2Q15434 407 aaKnown RBP8.75□□□□□ -1.01
VCAN-205ENST00000503923 TNXAQ16473 311 aa8.75□□□□□ -1.01
VCAN-205ENST00000503923 ECSCRQ19T08 205 aa8.75□□□□□ -1.01
VCAN-205ENST00000503923 OR4A47Q6IF82 309 aa8.75□□□□□ -1.01
VCAN-205ENST00000503923 TEX38Q6PEX7 206 aa8.75□□□□□ -1.01
VCAN-205ENST00000503923 C11orf44Q8N8P7 122 aa8.75□□□□□ -1.01
VCAN-205ENST00000503923 GRPEL2Q8TAA5 225 aa8.75□□□□□ -1.01
VCAN-205ENST00000503923 TP53RKQ96S44 253 aa8.75□□□□□ -1.01
VCAN-205ENST00000503923 NAA60Q9H7X0 242 aa8.75□□□□□ -1.01
VCAN-205ENST00000503923 TMEM140Q9NV12 185 aa8.75□□□□□ -1.01
VCAN-205ENST00000503923 FBXO7Q9Y3I1 522 aa8.75□□□□□ -1.01
VCAN-205ENST00000503923 WSB1Q9Y6I7 421 aa8.75□□□□□ -1.01
VCAN-205ENST00000503923 TNCP24821 2201 aa8.74□□□□□ -1.01
VCAN-205ENST00000503923 G3V318 75 aa8.74□□□□□ -1.01
VCAN-205ENST00000503923 UPK2O00526 184 aa8.74□□□□□ -1.01
VCAN-205ENST00000503923 ATG12O94817 140 aa8.74□□□□□ -1.01
VCAN-205ENST00000503923 KRASP01116 189 aa8.74□□□□□ -1.01
VCAN-205ENST00000503923 OPN1MWP04001 364 aa8.74□□□□□ -1.01
VCAN-205ENST00000503923 IL6RP08887 468 aaPredicted RBP8.74□□□□□ -1.01
VCAN-205ENST00000503923 OPN1MW2P0DN77 364 aa8.74□□□□□ -1.01
VCAN-205ENST00000503923 OPN1MW3P0DN78 364 aa8.74□□□□□ -1.01
VCAN-205ENST00000503923 EGR2P11161 476 aaPredicted RBP8.74□□□□□ -1.01
VCAN-205ENST00000503923 UCP1P25874 307 aa8.74□□□□□ -1.01
VCAN-205ENST00000503923 MAS1LP35410 378 aa8.74□□□□□ -1.01
VCAN-205ENST00000503923 G6PCP35575 357 aa8.74□□□□□ -1.01
VCAN-205ENST00000503923 CCR6P51684 374 aa8.74□□□□□ -1.01
VCAN-205ENST00000503923 RPL8P62917 257 aaKnown RBP8.74□□□□□ -1.01
VCAN-205ENST00000503923 SSBP2P81877 361 aaPredicted RBP8.74□□□□□ -1.01
VCAN-205ENST00000503923 CD83Q01151 205 aa8.74□□□□□ -1.01
VCAN-205ENST00000503923 DHODHQ02127 395 aa8.74□□□□□ -1.01
VCAN-205ENST00000503923 TRIM16LQ309B1 348 aa8.74□□□□□ -1.01
VCAN-205ENST00000503923 AKIRIN2Q53H80 203 aa8.74□□□□□ -1.01
VCAN-205ENST00000503923 UNQ5815/PRO19632Q6UWF5 114 aa8.74□□□□□ -1.01
VCAN-205ENST00000503923 C10orf99Q6UWK7 81 aa8.74□□□□□ -1.01
VCAN-205ENST00000503923 SGPP2Q8IWX5 399 aa8.74□□□□□ -1.01
VCAN-205ENST00000503923 CADM3Q8N126 398 aa8.74□□□□□ -1.01
VCAN-205ENST00000503923 SRSF12Q8WXF0 261 aaKnown RBP8.74□□□□□ -1.01
VCAN-205ENST00000503923 TMEM68Q96MH6 324 aa8.74□□□□□ -1.01
VCAN-205ENST00000503923 FAM103A1Q9BTL3 118 aaKnown RBP8.74□□□□□ -1.01
VCAN-205ENST00000503923 KCNIP3Q9Y2W7 256 aa8.74□□□□□ -1.01
VCAN-205ENST00000503923 NUBP2Q9Y5Y2 271 aa8.74□□□□□ -1.01
VCAN-205ENST00000503923 TET2Q6N021 2002 aaPredicted RBP8.73□□□□□ -1.01
VCAN-205ENST00000503923 TCRBV4S1A1TA0A5B7 111 aa8.73□□□□□ -1.01
VCAN-205ENST00000503923 PLA2G10O15496 165 aa8.73□□□□□ -1.01
VCAN-205ENST00000503923 LYRM1O43325 122 aa8.73□□□□□ -1.01
VCAN-205ENST00000503923 NDUFB6O95139 128 aa8.73□□□□□ -1.01
VCAN-205ENST00000503923 IGKV1-39P01597 117 aa8.73□□□□□ -1.01
VCAN-205ENST00000503923 IGHG4P01861 327 aa8.73□□□□□ -1.01
VCAN-205ENST00000503923 IGKV1D-39P04432 117 aa8.73□□□□□ -1.01
VCAN-205ENST00000503923 ELANEP08246 267 aa8.73□□□□□ -1.01
VCAN-205ENST00000503923 FGF2P09038 288 aa8.73□□□□□ -1.01
VCAN-205ENST00000503923 OR5AC1P0C628 307 aa8.73□□□□□ -1.01
VCAN-205ENST00000503923 AKR1C4P17516 323 aa8.73□□□□□ -1.01
VCAN-205ENST00000503923 HLA-GP17693 338 aa8.73□□□□□ -1.01
VCAN-205ENST00000503923 PPIFP30405 207 aaKnown RBP8.73□□□□□ -1.01
VCAN-205ENST00000503923 FOXE3Q13461 319 aa8.73□□□□□ -1.01
VCAN-205ENST00000503923 SP6Q3SY56 376 aa8.73□□□□□ -1.01
VCAN-205ENST00000503923 C19orf54Q5BKX5 351 aa8.73□□□□□ -1.01
VCAN-205ENST00000503923 TCTEX1D4Q5JR98 221 aa8.73□□□□□ -1.01
VCAN-205ENST00000503923 CXorf66Q5JRM2 361 aaPredicted RBP8.73□□□□□ -1.01
VCAN-205ENST00000503923 TMED4Q7Z7H5 227 aa8.73□□□□□ -1.01
VCAN-205ENST00000503923 NDUFA11Q86Y39 141 aa8.73□□□□□ -1.01
VCAN-205ENST00000503923 MINDY2Q8NBR6 621 aa8.73□□□□□ -1.01
VCAN-205ENST00000503923 ADAD2Q8NCV1 583 aaKnown RBP8.73□□□□□ -1.01
VCAN-205ENST00000503923 LFNGQ8NES3 379 aa8.73□□□□□ -1.01
VCAN-205ENST00000503923 TMEM230Q96A57 120 aa8.73□□□□□ -1.01
VCAN-205ENST00000503923 GALNT14Q96FL9 552 aa8.73□□□□□ -1.01
VCAN-205ENST00000503923 SEC22AQ96IW7 307 aa8.73□□□□□ -1.01
VCAN-205ENST00000503923 TSC22D3Q99576 134 aa8.73□□□□□ -1.01
VCAN-205ENST00000503923 PHB2Q99623 299 aa8.73□□□□□ -1.01
VCAN-205ENST00000503923 SPIN2AQ99865 258 aa8.73□□□□□ -1.01
VCAN-205ENST00000503923 CITED2Q99967 270 aaPredicted RBP8.73□□□□□ -1.01
VCAN-205ENST00000503923 SPIN2BQ9BPZ2 258 aa8.73□□□□□ -1.01
VCAN-205ENST00000503923 TMEM222Q9H0R3 208 aa8.73□□□□□ -1.01
VCAN-205ENST00000503923 FOXA2Q9Y261 457 aaPredicted RBP8.73□□□□□ -1.01
VCAN-205ENST00000503923 TRAV3A0A0B4J244 114 aa8.72□□□□□ -1.01
VCAN-205ENST00000503923 A0A1W2PN81 502 aa8.72□□□□□ -1.01
VCAN-205ENST00000503923 MSGN1A6NI15 193 aa8.72□□□□□ -1.01
VCAN-205ENST00000503923 UPK1BO75841 260 aa8.72□□□□□ -1.01
VCAN-205ENST00000503923 SNAPC5O75971 98 aa8.72□□□□□ -1.01
VCAN-205ENST00000503923 CDS2O95674 445 aa8.72□□□□□ -1.01
VCAN-205ENST00000503923 ANXA3P12429 323 aa8.72□□□□□ -1.01
VCAN-205ENST00000503923 BTCP35070 178 aa8.72□□□□□ -1.01
VCAN-205ENST00000503923 CHRNA7P36544 502 aa8.72□□□□□ -1.01
VCAN-205ENST00000503923 RPL27AP46776 148 aaKnown RBP8.72□□□□□ -1.01
VCAN-205ENST00000503923 TMEM128Q5BJH2 165 aa8.72□□□□□ -1.01
VCAN-205ENST00000503923 H2BFWTQ7Z2G1 175 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms