RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 SAPCD1Q5SSQ6 148 aa0.25□□□□□ -2.37
SMAD1-203ENST00000502342 FAM45BPQ6NSW5 357 aa0.25□□□□□ -2.37
SMAD1-203ENST00000502342 ZNF676Q8N7Q3 588 aa0.25□□□□□ -2.37
SMAD1-203ENST00000502342 C9orf163Q8N9P6 203 aa0.25□□□□□ -2.37
SMAD1-203ENST00000502342 OR4C6Q8NH72 309 aa0.25□□□□□ -2.37
SMAD1-203ENST00000502342 OR10D3Q8NH80 312 aa0.25□□□□□ -2.37
SMAD1-203ENST00000502342 ANKRD36BP1Q96IX9 119 aa0.25□□□□□ -2.37
SMAD1-203ENST00000502342 RBP7Q96R05 134 aa0.25□□□□□ -2.37
SMAD1-203ENST00000502342 AGPAT3Q9NRZ7 376 aa0.25□□□□□ -2.37
SMAD1-203ENST00000502342 GMEB1Q9Y692 573 aa0.25□□□□□ -2.37
SMAD1-203ENST00000502342 AHNAKQ09666 5890 aaKnown RBP0.25□□□□□ -2.37
SMAD1-203ENST00000502342 RIMS2Q9UQ26 1411 aa0.24□□□□□ -2.37
SMAD1-203ENST00000502342 KIF24Q5T7B8 1368 aa0.24□□□□□ -2.37
SMAD1-203ENST00000502342 TONSLQ96HA7 1378 aa0.24□□□□□ -2.37
SMAD1-203ENST00000502342 ALPK2Q86TB3 2170 aa0.24□□□□□ -2.37
SMAD1-203ENST00000502342 A0A1B0GW54 56 aa0.24□□□□□ -2.37
SMAD1-203ENST00000502342 C21orf140B9A014 251 aa0.24□□□□□ -2.37
SMAD1-203ENST00000502342 PHGR1C9JFL3 82 aa0.24□□□□□ -2.37
SMAD1-203ENST00000502342 COX7A2LO14548 114 aa0.24□□□□□ -2.37
SMAD1-203ENST00000502342 AZIN1O14977 448 aa0.24□□□□□ -2.37
SMAD1-203ENST00000502342 RD3LP0DJH9 198 aa0.24□□□□□ -2.37
SMAD1-203ENST00000502342 HIST1H1CP16403 213 aaKnown RBP0.24□□□□□ -2.37
SMAD1-203ENST00000502342 CD40LGP29965 261 aa0.24□□□□□ -2.37
SMAD1-203ENST00000502342 KDELR2P33947 212 aa0.24□□□□□ -2.37
SMAD1-203ENST00000502342 RUNX1Q01196 453 aa0.24□□□□□ -2.37
SMAD1-203ENST00000502342 HLA-DRB5Q30154 266 aa0.24□□□□□ -2.37
SMAD1-203ENST00000502342 KRTAP21-1Q3LI58 79 aa0.24□□□□□ -2.37
SMAD1-203ENST00000502342 DHFR2Q86XF0 187 aa0.24□□□□□ -2.37
SMAD1-203ENST00000502342 CRLF3Q8IUI8 442 aa0.24□□□□□ -2.37
SMAD1-203ENST00000502342 TBC1D19Q8N5T2 526 aa0.24□□□□□ -2.37
SMAD1-203ENST00000502342 OR5B17Q8NGF7 314 aa0.24□□□□□ -2.37
SMAD1-203ENST00000502342 CCL13Q99616 98 aa0.24□□□□□ -2.37
SMAD1-203ENST00000502342 C1orf109Q9NX04 203 aa0.24□□□□□ -2.37
SMAD1-203ENST00000502342 PRELID1Q9Y255 219 aa0.24□□□□□ -2.37
SMAD1-203ENST00000502342 TIMM22Q9Y584 194 aa0.24□□□□□ -2.37
SMAD1-203ENST00000502342 MDN1Q9NU22 5596 aa0.24□□□□□ -2.37
SMAD1-203ENST00000502342 LAMA4Q16363 1823 aa0.24□□□□□ -2.37
SMAD1-203ENST00000502342 LRPPRCP42704 1394 aaKnown RBP0.23□□□□□ -2.37
SMAD1-203ENST00000502342 A0A087WX48 190 aa0.23□□□□□ -2.37
SMAD1-203ENST00000502342 TRBV10-2A0A0K0K1G8 114 aa0.23□□□□□ -2.37
SMAD1-203ENST00000502342 TEX50A0A1B0GTY4 177 aa0.23□□□□□ -2.37
SMAD1-203ENST00000502342 GOLGA6L10A6NI86 522 aa0.23□□□□□ -2.37
SMAD1-203ENST00000502342 K7ERQ8 282 aa0.23□□□□□ -2.37
SMAD1-203ENST00000502342 CCRL2O00421 344 aa0.23□□□□□ -2.37
SMAD1-203ENST00000502342 PMP2P02689 132 aa0.23□□□□□ -2.37
SMAD1-203ENST00000502342 IL6P05231 212 aa0.23□□□□□ -2.37
SMAD1-203ENST00000502342 RNASE3P12724 160 aaKnown RBP0.23□□□□□ -2.37
SMAD1-203ENST00000502342 RAB13P51153 203 aa0.23□□□□□ -2.37
SMAD1-203ENST00000502342 C4orf26Q17RF5 130 aa0.23□□□□□ -2.37
SMAD1-203ENST00000502342 C17orf78Q8N4C9 275 aa0.23□□□□□ -2.37
SMAD1-203ENST00000502342 SLC37A2Q8TED4 501 aa0.23□□□□□ -2.37
SMAD1-203ENST00000502342 AQP3Q92482 292 aa0.23□□□□□ -2.37
SMAD1-203ENST00000502342 GNPNAT1Q96EK6 184 aaPredicted RBP0.23□□□□□ -2.37
SMAD1-203ENST00000502342 YIPF3Q9GZM5 350 aa0.23□□□□□ -2.37
SMAD1-203ENST00000502342 XAGE1AQ9HD64 81 aa0.23□□□□□ -2.37
SMAD1-203ENST00000502342 HRASLSQ9HDD0 168 aa0.23□□□□□ -2.37
SMAD1-203ENST00000502342 CHMP5Q9NZZ3 219 aa0.23□□□□□ -2.37
SMAD1-203ENST00000502342 LHFPL6Q9Y693 200 aa0.23□□□□□ -2.37
SMAD1-203ENST00000502342 MED12LQ86YW9 2145 aa0.23□□□□□ -2.37
SMAD1-203ENST00000502342 HEATR5AQ86XA9 2040 aa0.22□□□□□ -2.37
SMAD1-203ENST00000502342 IGKV1D-42A0A075B6H8 117 aa0.22□□□□□ -2.37
SMAD1-203ENST00000502342 IRGMA1A4Y4 181 aa0.22□□□□□ -2.37
SMAD1-203ENST00000502342 LEPROTO15243 131 aa0.22□□□□□ -2.37
SMAD1-203ENST00000502342 SLC22A1O15245 554 aa0.22□□□□□ -2.37
SMAD1-203ENST00000502342 BRI3O95415 125 aa0.22□□□□□ -2.37
SMAD1-203ENST00000502342 APOMO95445 188 aa0.22□□□□□ -2.37
SMAD1-203ENST00000502342 NSA2O95478 260 aaKnown RBP0.22□□□□□ -2.37
SMAD1-203ENST00000502342 SHBGP04278 402 aa0.22□□□□□ -2.37
SMAD1-203ENST00000502342 TPM1P09493 284 aa0.22□□□□□ -2.37
SMAD1-203ENST00000502342 CCL5P13501 91 aa0.22□□□□□ -2.37
SMAD1-203ENST00000502342 CSN1S1P47710 185 aa0.22□□□□□ -2.37
SMAD1-203ENST00000502342 EIF2B2P49770 351 aaKnown RBP0.22□□□□□ -2.37
SMAD1-203ENST00000502342 RPS24P62847 133 aaKnown RBP0.22□□□□□ -2.37
SMAD1-203ENST00000502342 SLAMF1Q13291 335 aa0.22□□□□□ -2.37
SMAD1-203ENST00000502342 ZNF345Q14585 488 aa0.22□□□□□ -2.37
SMAD1-203ENST00000502342 JOSD1Q15040 202 aaPredicted RBP0.22□□□□□ -2.37
SMAD1-203ENST00000502342 UBL4BQ8N7F7 174 aa0.22□□□□□ -2.37
SMAD1-203ENST00000502342 OR2T27Q8NH04 317 aa0.22□□□□□ -2.37
SMAD1-203ENST00000502342 ASB13Q8WXK3 278 aa0.22□□□□□ -2.37
SMAD1-203ENST00000502342 OBSCN-AS1Q96MR7 158 aa0.22□□□□□ -2.37
SMAD1-203ENST00000502342 ERMAPQ96PL5 475 aaPredicted RBP0.22□□□□□ -2.37
SMAD1-203ENST00000502342 CXorf21Q9HAI6 301 aa0.22□□□□□ -2.37
SMAD1-203ENST00000502342 HES4Q9HCC6 221 aa0.22□□□□□ -2.37
SMAD1-203ENST00000502342 BAIAP2Q9UQB8 552 aa0.22□□□□□ -2.37
SMAD1-203ENST00000502342 CCDC88AQ3V6T2 1871 aa0.22□□□□□ -2.37
SMAD1-203ENST00000502342 TNRC6BQ9UPQ9 1833 aaKnown RBP0.22□□□□□ -2.37
SMAD1-203ENST00000502342 STRCQ7RTU9 1775 aa0.22□□□□□ -2.37
SMAD1-203ENST00000502342 EXPH5Q8NEV8 1989 aa0.21□□□□□ -2.38
SMAD1-203ENST00000502342 FUOMA2VDF0 154 aa0.21□□□□□ -2.38
SMAD1-203ENST00000502342 SMLR1H3BR10 107 aa0.21□□□□□ -2.38
SMAD1-203ENST00000502342 METTL15P1P0C7V9 234 aa0.21□□□□□ -2.38
SMAD1-203ENST00000502342 SULT1A3P0DMM9 295 aa0.21□□□□□ -2.38
SMAD1-203ENST00000502342 SULT1A4P0DMN0 295 aa0.21□□□□□ -2.38
SMAD1-203ENST00000502342 HLA-DMBP28068 263 aa0.21□□□□□ -2.38
SMAD1-203ENST00000502342 C5orf46Q6UWT4 87 aa0.21□□□□□ -2.38
SMAD1-203ENST00000502342 COPS6Q7L5N1 327 aa0.21□□□□□ -2.38
SMAD1-203ENST00000502342 SSX8Q7RTT4 187 aa0.21□□□□□ -2.38
SMAD1-203ENST00000502342 C10orf67Q8IYJ2 551 aa0.21□□□□□ -2.38
SMAD1-203ENST00000502342 BOD1L2Q8IYS8 172 aa0.21□□□□□ -2.38
SMAD1-203ENST00000502342 C1orf158Q8N1D5 194 aa0.21□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms