RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 GALMQ96C23 342 aa13.63□□□□□ -0.23
COL6A1-206ENST00000498614 MSL2Q9HCI7 577 aa13.63□□□□□ -0.23
COL6A1-206ENST00000498614 KIR2DL5BA0A0G2JN68 375 aa13.63□□□□□ -0.23
COL6A1-206ENST00000498614 KIR2DL5BA0A0G2JPC4 375 aa13.63□□□□□ -0.23
COL6A1-206ENST00000498614 TIMM8AO60220 97 aaPredicted RBP13.63□□□□□ -0.23
COL6A1-206ENST00000498614 IGKV3-15P01624 115 aa13.63□□□□□ -0.23
COL6A1-206ENST00000498614 FABP6P51161 128 aa13.63□□□□□ -0.23
COL6A1-206ENST00000498614 FOXF2Q12947 444 aa13.63□□□□□ -0.23
COL6A1-206ENST00000498614 SPACA3Q8IXA5 215 aa13.63□□□□□ -0.23
COL6A1-206ENST00000498614 KIR2DL5AQ8N109 375 aa13.63□□□□□ -0.23
COL6A1-206ENST00000498614 TPRX1Q8N7U7 411 aa13.63□□□□□ -0.23
COL6A1-206ENST00000498614 DOCK11Q5JSL3 2073 aa13.62□□□□□ -0.23
COL6A1-206ENST00000498614 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.62□□□□□ -0.23
COL6A1-206ENST00000498614 M0R143 59 aa13.62□□□□□ -0.23
COL6A1-206ENST00000498614 TMPRSS2O15393 492 aa13.62□□□□□ -0.23
COL6A1-206ENST00000498614 RBFOX2O43251 390 aaKnown RBP eCLIP13.62□□□□□ -0.23
COL6A1-206ENST00000498614 RBMXL2O75526 392 aaKnown RBP13.62□□□□□ -0.23
COL6A1-206ENST00000498614 HBZP02008 142 aa13.62□□□□□ -0.23
COL6A1-206ENST00000498614 CD99P14209 185 aa13.62□□□□□ -0.23
COL6A1-206ENST00000498614 GABRA2P47869 451 aa13.62□□□□□ -0.23
COL6A1-206ENST00000498614 MRGPRDQ8TDS7 321 aa13.62□□□□□ -0.23
COL6A1-206ENST00000498614 COQ2Q96H96 371 aa13.62□□□□□ -0.23
COL6A1-206ENST00000498614 MS4A10Q96PG2 267 aa13.62□□□□□ -0.23
COL6A1-206ENST00000498614 METRNQ9UJH8 293 aa13.62□□□□□ -0.23
COL6A1-206ENST00000498614 C17orf112F2Z3M2 114 aa13.61□□□□□ -0.23
COL6A1-206ENST00000498614 PDE6DO43924 150 aa13.61□□□□□ -0.23
COL6A1-206ENST00000498614 CECR9P0C854 216 aa13.61□□□□□ -0.23
COL6A1-206ENST00000498614 ZBTB34Q8NCN2 500 aa13.61□□□□□ -0.23
COL6A1-206ENST00000498614 SGMS2Q8NHU3 365 aa13.61□□□□□ -0.23
COL6A1-206ENST00000498614 CXXC4Q9H2H0 198 aa13.61□□□□□ -0.23
COL6A1-206ENST00000498614 ELOVL5Q9NYP7 299 aa13.61□□□□□ -0.23
COL6A1-206ENST00000498614 CLDN14O95500 239 aa13.61□□□□□ -0.23
COL6A1-206ENST00000498614 CD33P20138 364 aa13.61□□□□□ -0.23
COL6A1-206ENST00000498614 EDDM3BP56851 147 aa13.61□□□□□ -0.23
COL6A1-206ENST00000498614 WDR82Q6UXN9 313 aa13.61□□□□□ -0.23
COL6A1-206ENST00000498614 ACP7Q6ZNF0 438 aa13.61□□□□□ -0.23
COL6A1-206ENST00000498614 H2BFWTQ7Z2G1 175 aa13.61□□□□□ -0.23
COL6A1-206ENST00000498614 CIB3Q96Q77 187 aaPredicted RBP13.61□□□□□ -0.23
COL6A1-206ENST00000498614 DIRC2Q96SL1 478 aa13.61□□□□□ -0.23
COL6A1-206ENST00000498614 MAP1BP46821 2468 aaKnown RBP13.61□□□□□ -0.23
COL6A1-206ENST00000498614 IGHV3-43A0A0B4J1X8 118 aa13.6□□□□□ -0.23
COL6A1-206ENST00000498614 OOEPA6NGQ2 149 aa13.6□□□□□ -0.23
COL6A1-206ENST00000498614 C15orf62A8K5M9 175 aa13.6□□□□□ -0.23
COL6A1-206ENST00000498614 RAB29O14966 203 aa13.6□□□□□ -0.23
COL6A1-206ENST00000498614 SOX15O60248 233 aa13.6□□□□□ -0.23
COL6A1-206ENST00000498614 IGHV3-43DP0DP04 118 aa13.6□□□□□ -0.23
COL6A1-206ENST00000498614 OR10J1P30954 320 aa13.6□□□□□ -0.23
COL6A1-206ENST00000498614 ADMP35318 185 aa13.6□□□□□ -0.23
COL6A1-206ENST00000498614 TDGF1P3P51864 188 aa13.6□□□□□ -0.23
COL6A1-206ENST00000498614 FOXL1Q12952 345 aa13.6□□□□□ -0.23
COL6A1-206ENST00000498614 SFRP2Q96HF1 295 aa13.6□□□□□ -0.23
COL6A1-206ENST00000498614 RAXQ9Y2V3 346 aa13.6□□□□□ -0.23
COL6A1-206ENST00000498614 CACNA1DQ01668 2161 aa13.6□□□□□ -0.23
COL6A1-206ENST00000498614 PTPRQQ9UMZ3 2332 aa13.6□□□□□ -0.23
COL6A1-206ENST00000498614 TRBV20OR9-2A0A075B6H5 130 aa13.6□□□□□ -0.23
COL6A1-206ENST00000498614 GRIFINA4D1Z8 144 aa13.6□□□□□ -0.23
COL6A1-206ENST00000498614 ZNF705FA8MVS1 300 aaPredicted RBP13.6□□□□□ -0.23
COL6A1-206ENST00000498614 ZNF705DP0CH99 300 aaPredicted RBP13.6□□□□□ -0.23
COL6A1-206ENST00000498614 ZNF705BP0CI00 300 aaPredicted RBP13.6□□□□□ -0.23
COL6A1-206ENST00000498614 RAB4AP20338 218 aa13.6□□□□□ -0.23
COL6A1-206ENST00000498614 CATR1Q13166 79 aa13.6□□□□□ -0.23
COL6A1-206ENST00000498614 SLC35E4Q6ICL7 350 aa13.6□□□□□ -0.23
COL6A1-206ENST00000498614 NINJ1Q92982 152 aa13.6□□□□□ -0.23
COL6A1-206ENST00000498614 TBX15Q96SF7 602 aa13.6□□□□□ -0.23
COL6A1-206ENST00000498614 IMMP2LQ96T52 175 aa13.6□□□□□ -0.23
COL6A1-206ENST00000498614 TMEM204Q9BSN7 226 aa13.6□□□□□ -0.23
COL6A1-206ENST00000498614 KCNIP2Q9NS61 270 aa13.6□□□□□ -0.23
COL6A1-206ENST00000498614 HNF1AP20823 631 aa13.59□□□□□ -0.23
COL6A1-206ENST00000498614 SSTR5P35346 364 aa13.59□□□□□ -0.23
COL6A1-206ENST00000498614 PATZ1Q9HBE1 687 aaKnown RBP13.59□□□□□ -0.23
COL6A1-206ENST00000498614 WDR83OSQ9Y284 106 aa13.59□□□□□ -0.23
COL6A1-206ENST00000498614 USF3Q68DE3 2245 aa13.59□□□□□ -0.23
COL6A1-206ENST00000498614 AQP7O14520 342 aa13.59□□□□□ -0.23
COL6A1-206ENST00000498614 LRP11Q86VZ4 500 aa13.59□□□□□ -0.23
COL6A1-206ENST00000498614 RFESDQ8TAC1 157 aa13.59□□□□□ -0.23
COL6A1-206ENST00000498614 SDSLQ96GA7 329 aa13.59□□□□□ -0.23
COL6A1-206ENST00000498614 TMEM68Q96MH6 324 aa13.59□□□□□ -0.23
COL6A1-206ENST00000498614 QTRT1Q9BXR0 403 aaKnown RBP13.59□□□□□ -0.23
COL6A1-206ENST00000498614 OPN3Q9H1Y3 402 aaPredicted RBP13.59□□□□□ -0.23
COL6A1-206ENST00000498614 LINC00473A8K010 186 aa13.58□□□□□ -0.24
COL6A1-206ENST00000498614 DEFB108AA8MXU0 73 aa13.58□□□□□ -0.24
COL6A1-206ENST00000498614 F6UZH7 168 aa13.58□□□□□ -0.24
COL6A1-206ENST00000498614 CD1BP29016 333 aa13.58□□□□□ -0.24
COL6A1-206ENST00000498614 RPL29P47914 159 aaKnown RBP13.58□□□□□ -0.24
COL6A1-206ENST00000498614 CYB5R2Q6BCY4 276 aa13.58□□□□□ -0.24
COL6A1-206ENST00000498614 OR13A1Q8NGR1 328 aa13.58□□□□□ -0.24
COL6A1-206ENST00000498614 ZCCHC14Q8WYQ9 949 aaKnown RBP13.58□□□□□ -0.24
COL6A1-206ENST00000498614 TP53TG3Q9ULZ0 132 aa13.58□□□□□ -0.24
COL6A1-206ENST00000498614 NBEAQ8NFP9 2946 aa13.58□□□□□ -0.24
COL6A1-206ENST00000498614 TRAV17A0A0B4J275 112 aa13.58□□□□□ -0.24
COL6A1-206ENST00000498614 MDFIC2A0A1B0GVS7 189 aa13.58□□□□□ -0.24
COL6A1-206ENST00000498614 A0A1W2PPV4 95 aa13.58□□□□□ -0.24
COL6A1-206ENST00000498614 K7EM74 188 aa13.58□□□□□ -0.24
COL6A1-206ENST00000498614 ALKBH2Q6NS38 261 aa13.58□□□□□ -0.24
COL6A1-206ENST00000498614 CMTM2Q8TAZ6 248 aa13.58□□□□□ -0.24
COL6A1-206ENST00000498614 SARAFQ96BY9 339 aa13.58□□□□□ -0.24
COL6A1-206ENST00000498614 BTF3L4Q96K17 158 aa13.58□□□□□ -0.24
COL6A1-206ENST00000498614 DCTN5Q9BTE1 182 aa13.58□□□□□ -0.24
COL6A1-206ENST00000498614 CACNA1AO00555 2505 aa13.58□□□□□ -0.24
COL6A1-206ENST00000498614 INTS1Q8N201 2190 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms