RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 C2orf76Q3KRA6 126 aa12.03□□□□□ -0.48
MUC1-220ENST00000498431 VMA21Q3ZAQ7 101 aa12.03□□□□□ -0.48
MUC1-220ENST00000498431 TEX45Q8NA69 505 aa12.03□□□□□ -0.48
MUC1-220ENST00000498431 OR4A4PQ8NGN8 299 aa12.03□□□□□ -0.48
MUC1-220ENST00000498431 DDB2Q92466 427 aa12.03□□□□□ -0.48
MUC1-220ENST00000498431 SLC25A46Q96AG3 418 aa12.03□□□□□ -0.48
MUC1-220ENST00000498431 CABLES2Q9BTV7 478 aa12.03□□□□□ -0.48
MUC1-220ENST00000498431 RBM38Q9H0Z9 239 aaKnown RBP12.03□□□□□ -0.48
MUC1-220ENST00000498431 ZNF430Q9H8G1 570 aaPredicted RBP12.03□□□□□ -0.48
MUC1-220ENST00000498431 RSL24D1Q9UHA3 163 aaKnown RBP12.03□□□□□ -0.48
MUC1-220ENST00000498431 DPPA5A6NC42 116 aa12.02□□□□□ -0.49
MUC1-220ENST00000498431 CXorf65A6NEN9 183 aa12.02□□□□□ -0.49
MUC1-220ENST00000498431 LINC00473A8K010 186 aa12.02□□□□□ -0.49
MUC1-220ENST00000498431 ZNF701M0R085 212 aaPredicted RBP12.02□□□□□ -0.49
MUC1-220ENST00000498431 GSTT2P0CG29 244 aa12.02□□□□□ -0.49
MUC1-220ENST00000498431 GSTT2BP0CG30 244 aa12.02□□□□□ -0.49
MUC1-220ENST00000498431 RORCP51449 518 aa12.02□□□□□ -0.49
MUC1-220ENST00000498431 CBX3Q13185 183 aa12.02□□□□□ -0.49
MUC1-220ENST00000498431 SPCS2Q15005 226 aa12.02□□□□□ -0.49
MUC1-220ENST00000498431 C15orf32Q32M92 178 aa12.02□□□□□ -0.49
MUC1-220ENST00000498431 IDNKQ5T6J7 187 aa12.02□□□□□ -0.49
MUC1-220ENST00000498431 TMEM61Q8N0U2 210 aa12.02□□□□□ -0.49
MUC1-220ENST00000498431 MAFIPQ8WZ33 124 aa12.02□□□□□ -0.49
MUC1-220ENST00000498431 KCTD12Q96CX2 325 aaKnown RBP12.02□□□□□ -0.49
MUC1-220ENST00000498431 KCNK7Q9Y2U2 307 aa12.02□□□□□ -0.49
MUC1-220ENST00000498431 PCLOQ9Y6V0 5065 aa12.02□□□□□ -0.49
MUC1-220ENST00000498431 TRBV6-7A0A0A0MS04 114 aa12.01□□□□□ -0.49
MUC1-220ENST00000498431 SAA1P0DJI8 122 aaPredicted RBP12.01□□□□□ -0.49
MUC1-220ENST00000498431 RRASP10301 218 aa12.01□□□□□ -0.49
MUC1-220ENST00000498431 DUTP33316 252 aaKnown RBP12.01□□□□□ -0.49
MUC1-220ENST00000498431 RPP25LQ8N5L8 163 aaKnown RBP12.01□□□□□ -0.49
MUC1-220ENST00000498431 TTC9CQ8N5M4 171 aa12.01□□□□□ -0.49
MUC1-220ENST00000498431 NECAP1Q8NC96 275 aa12.01□□□□□ -0.49
MUC1-220ENST00000498431 OR10J5Q8NHC4 309 aa12.01□□□□□ -0.49
MUC1-220ENST00000498431 DGCR14Q96DF8 476 aaKnown RBP12.01□□□□□ -0.49
MUC1-220ENST00000498431 GGTLC1Q9BX51 225 aa12.01□□□□□ -0.49
MUC1-220ENST00000498431 TECRQ9NZ01 308 aaKnown RBP12.01□□□□□ -0.49
MUC1-220ENST00000498431 MLXQ9UH92 298 aa12.01□□□□□ -0.49
MUC1-220ENST00000498431 S4R3C0 116 aa12.01□□□□□ -0.49
MUC1-220ENST00000498431 A0A0J9YWU9 116 aa12□□□□□ -0.49
MUC1-220ENST00000498431 HMX3A6NHT5 357 aa12□□□□□ -0.49
MUC1-220ENST00000498431 LGALS9O00182 355 aa12□□□□□ -0.49
MUC1-220ENST00000498431 IGHV3-23P01764 117 aa12□□□□□ -0.49
MUC1-220ENST00000498431 FCGR3AP08637 254 aa12□□□□□ -0.49
MUC1-220ENST00000498431 CBLN1P23435 193 aa12□□□□□ -0.49
MUC1-220ENST00000498431 SCAND1P57086 179 aa12□□□□□ -0.49
MUC1-220ENST00000498431 SLC16A13Q7RTY0 426 aa12□□□□□ -0.49
MUC1-220ENST00000498431 RAB22AQ9UL26 194 aa12□□□□□ -0.49
MUC1-220ENST00000498431 VPS13DQ5THJ4 4388 aa12□□□□□ -0.49
MUC1-220ENST00000498431 TMEM272A0A1B0GTI8 110 aa11.99□□□□□ -0.49
MUC1-220ENST00000498431 TMEM213A2RRL7 107 aa11.99□□□□□ -0.49
MUC1-220ENST00000498431 GGCTO75223 188 aaKnown RBP11.99□□□□□ -0.49
MUC1-220ENST00000498431 SCAF4O95104 1147 aaKnown RBP11.99□□□□□ -0.49
MUC1-220ENST00000498431 ZNF182P17025 639 aaPredicted RBP11.99□□□□□ -0.49
MUC1-220ENST00000498431 RAB6AP20340 208 aa11.99□□□□□ -0.49
MUC1-220ENST00000498431 OR56B1Q8NGI3 324 aa11.99□□□□□ -0.49
MUC1-220ENST00000498431 OR52B4Q8NGK2 314 aa11.99□□□□□ -0.49
MUC1-220ENST00000498431 CCDC140Q96MF4 163 aa11.99□□□□□ -0.49
MUC1-220ENST00000498431 SPIN2AQ99865 258 aa11.99□□□□□ -0.49
MUC1-220ENST00000498431 SPIN2BQ9BPZ2 258 aa11.99□□□□□ -0.49
MUC1-220ENST00000498431 BATF3Q9NR55 127 aa11.99□□□□□ -0.49
MUC1-220ENST00000498431 RBM7Q9Y580 266 aaKnown RBP11.99□□□□□ -0.49
MUC1-220ENST00000498431 ETV7Q9Y603 341 aa11.99□□□□□ -0.49
MUC1-220ENST00000498431 LOC102724200A0A096LPH7 203 aaPredicted RBP11.98□□□□□ -0.49
MUC1-220ENST00000498431 NUPR2A6NF83 97 aa11.98□□□□□ -0.49
MUC1-220ENST00000498431 TEX22C9J3V5 150 aa11.98□□□□□ -0.49
MUC1-220ENST00000498431 E7EUB6 86 aa11.98□□□□□ -0.49
MUC1-220ENST00000498431 CDK10Q15131 360 aa11.98□□□□□ -0.49
MUC1-220ENST00000498431 ZNF57Q68EA5 555 aaPredicted RBP11.98□□□□□ -0.49
MUC1-220ENST00000498431 GPHB5Q86YW7 130 aa11.98□□□□□ -0.49
MUC1-220ENST00000498431 OSR1Q8TAX0 266 aaPredicted RBP11.98□□□□□ -0.49
MUC1-220ENST00000498431 LGALS14Q8TCE9 139 aa11.98□□□□□ -0.49
MUC1-220ENST00000498431 DYNC2LI1Q8TCX1 351 aa11.98□□□□□ -0.49
MUC1-220ENST00000498431 AP3S1Q92572 193 aa11.98□□□□□ -0.49
MUC1-220ENST00000498431 CCDC59Q9P031 241 aaKnown RBP11.98□□□□□ -0.49
MUC1-220ENST00000498431 FBXL7Q9UJT9 491 aa11.98□□□□□ -0.49
MUC1-220ENST00000498431 IGKV1D-8A0A087WSZ0 117 aa11.97□□□□□ -0.49
MUC1-220ENST00000498431 A0A1B0GW64 132 aa11.97□□□□□ -0.49
MUC1-220ENST00000498431 METTL21EPA6NDL7 271 aa11.97□□□□□ -0.49
MUC1-220ENST00000498431 A6NHS1 94 aa11.97□□□□□ -0.49
MUC1-220ENST00000498431 DEDDO75618 318 aa11.97□□□□□ -0.49
MUC1-220ENST00000498431 ACTL6BO94805 426 aa11.97□□□□□ -0.49
MUC1-220ENST00000498431 NDUFB8O95169 186 aa11.97□□□□□ -0.49
MUC1-220ENST00000498431 ARL3P36405 182 aa11.97□□□□□ -0.49
MUC1-220ENST00000498431 MZT2AQ6P582 158 aa11.97□□□□□ -0.49
MUC1-220ENST00000498431 CEMP1Q6PRD7 247 aaPredicted RBP11.97□□□□□ -0.49
MUC1-220ENST00000498431 CLEC19AQ6UXS0 136 aa11.97□□□□□ -0.49
MUC1-220ENST00000498431 LYG2Q86SG7 212 aa11.97□□□□□ -0.49
MUC1-220ENST00000498431 MMD2Q8IY49 270 aa11.97□□□□□ -0.49
MUC1-220ENST00000498431 VKORC1L1Q8N0U8 176 aa11.97□□□□□ -0.49
MUC1-220ENST00000498431 UXS1Q8NBZ7 420 aa11.97□□□□□ -0.49
MUC1-220ENST00000498431 ADTRPQ96IZ2 230 aa11.97□□□□□ -0.49
MUC1-220ENST00000498431 FANCD2OSQ96PS1 177 aa11.97□□□□□ -0.49
MUC1-220ENST00000498431 SPATA2Q9UM82 520 aa11.97□□□□□ -0.49
MUC1-220ENST00000498431 ZNF257Q9Y2Q1 563 aa11.97□□□□□ -0.49
MUC1-220ENST00000498431 J3QRK9 145 aa11.96□□□□□ -0.49
MUC1-220ENST00000498431 FCGR3BO75015 233 aa11.96□□□□□ -0.49
MUC1-220ENST00000498431 IL6RP08887 468 aaPredicted RBP11.96□□□□□ -0.49
MUC1-220ENST00000498431 GNB3P16520 340 aa11.96□□□□□ -0.49
MUC1-220ENST00000498431 MRPS15P82914 257 aaKnown RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms