RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 LINC00527Q9UJ94 153 aa12.59□□□□□ -0.39
SSBP1-214ENST00000498107 KCNIP3Q9Y2W7 256 aa12.59□□□□□ -0.39
SSBP1-214ENST00000498107 MARCH11A6NNE9 402 aa12.58□□□□□ -0.4
SSBP1-214ENST00000498107 OPN1MWP04001 364 aa12.58□□□□□ -0.4
SSBP1-214ENST00000498107 FGF2P09038 288 aa12.58□□□□□ -0.4
SSBP1-214ENST00000498107 OPN1MW2P0DN77 364 aa12.58□□□□□ -0.4
SSBP1-214ENST00000498107 OPN1MW3P0DN78 364 aa12.58□□□□□ -0.4
SSBP1-214ENST00000498107 KRTAP10-3P60369 221 aa12.58□□□□□ -0.4
SSBP1-214ENST00000498107 RBMS2Q15434 407 aaKnown RBP12.58□□□□□ -0.4
SSBP1-214ENST00000498107 TNXAQ16473 311 aa12.58□□□□□ -0.4
SSBP1-214ENST00000498107 ZNF585BQ52M93 769 aa12.58□□□□□ -0.4
SSBP1-214ENST00000498107 AKIRIN2Q53H80 203 aa12.58□□□□□ -0.4
SSBP1-214ENST00000498107 OR4A47Q6IF82 309 aa12.58□□□□□ -0.4
SSBP1-214ENST00000498107 SGPP2Q8IWX5 399 aa12.58□□□□□ -0.4
SSBP1-214ENST00000498107 VKORC1L1Q8N0U8 176 aa12.58□□□□□ -0.4
SSBP1-214ENST00000498107 ZNF430Q9H8G1 570 aaPredicted RBP12.58□□□□□ -0.4
SSBP1-214ENST00000498107 TNCP24821 2201 aa12.57□□□□□ -0.4
SSBP1-214ENST00000498107 ELANEP08246 267 aa12.57□□□□□ -0.4
SSBP1-214ENST00000498107 RPL8P62917 257 aaKnown RBP12.57□□□□□ -0.4
SSBP1-214ENST00000498107 NDPQ00604 133 aa12.57□□□□□ -0.4
SSBP1-214ENST00000498107 DHODHQ02127 395 aa12.57□□□□□ -0.4
SSBP1-214ENST00000498107 SRSF4Q08170 494 aaKnown RBP12.57□□□□□ -0.4
SSBP1-214ENST00000498107 PJVKQ0ZLH3 352 aa12.57□□□□□ -0.4
SSBP1-214ENST00000498107 ECSCRQ19T08 205 aa12.57□□□□□ -0.4
SSBP1-214ENST00000498107 ZNF329Q86UD4 541 aa12.57□□□□□ -0.4
SSBP1-214ENST00000498107 GRPEL2Q8TAA5 225 aa12.57□□□□□ -0.4
SSBP1-214ENST00000498107 TSC22D3Q99576 134 aa12.57□□□□□ -0.4
SSBP1-214ENST00000498107 NAA60Q9H7X0 242 aa12.57□□□□□ -0.4
SSBP1-214ENST00000498107 TMEM140Q9NV12 185 aa12.57□□□□□ -0.4
SSBP1-214ENST00000498107 NUBP2Q9Y5Y2 271 aa12.57□□□□□ -0.4
SSBP1-214ENST00000498107 WSB1Q9Y6I7 421 aa12.57□□□□□ -0.4
SSBP1-214ENST00000498107 TET2Q6N021 2002 aaPredicted RBP12.56□□□□□ -0.4
SSBP1-214ENST00000498107 PIGBOS1A0A0B4J2F0 54 aa12.56□□□□□ -0.4
SSBP1-214ENST00000498107 LINC00854A0A1B0GVQ3 168 aa12.56□□□□□ -0.4
SSBP1-214ENST00000498107 TCRBV4S1A1TA0A5B7 111 aa12.56□□□□□ -0.4
SSBP1-214ENST00000498107 CRYM-AS1A6NIL9 109 aa12.56□□□□□ -0.4
SSBP1-214ENST00000498107 M0QZ24 198 aa12.56□□□□□ -0.4
SSBP1-214ENST00000498107 ARPC1BO15143 372 aaKnown RBP12.56□□□□□ -0.4
SSBP1-214ENST00000498107 KRASP01116 189 aa12.56□□□□□ -0.4
SSBP1-214ENST00000498107 IGHG4P01861 327 aa12.56□□□□□ -0.4
SSBP1-214ENST00000498107 CD28P10747 220 aa12.56□□□□□ -0.4
SSBP1-214ENST00000498107 ANXA3P12429 323 aa12.56□□□□□ -0.4
SSBP1-214ENST00000498107 CD83Q01151 205 aa12.56□□□□□ -0.4
SSBP1-214ENST00000498107 FOXE3Q13461 319 aa12.56□□□□□ -0.4
SSBP1-214ENST00000498107 TRIM16LQ309B1 348 aa12.56□□□□□ -0.4
SSBP1-214ENST00000498107 CXorf66Q5JRM2 361 aaPredicted RBP12.56□□□□□ -0.4
SSBP1-214ENST00000498107 UNQ5815/PRO19632Q6UWF5 114 aa12.56□□□□□ -0.4
SSBP1-214ENST00000498107 NDUFA11Q86Y39 141 aa12.56□□□□□ -0.4
SSBP1-214ENST00000498107 C11orf44Q8N8P7 122 aa12.56□□□□□ -0.4
SSBP1-214ENST00000498107 SRSF12Q8WXF0 261 aaKnown RBP12.56□□□□□ -0.4
SSBP1-214ENST00000498107 PHB2Q99623 299 aa12.56□□□□□ -0.4
SSBP1-214ENST00000498107 SPIN2AQ99865 258 aa12.56□□□□□ -0.4
SSBP1-214ENST00000498107 SPIN2BQ9BPZ2 258 aa12.56□□□□□ -0.4
SSBP1-214ENST00000498107 ZFP57Q9NU63 452 aa12.56□□□□□ -0.4
SSBP1-214ENST00000498107 VSIG4Q9Y279 399 aa12.56□□□□□ -0.4
SSBP1-214ENST00000498107 TSSC4Q9Y5U2 329 aaPredicted RBP12.56□□□□□ -0.4
SSBP1-214ENST00000498107 ANK2Q01484 3957 aa12.56□□□□□ -0.4
SSBP1-214ENST00000498107 UPK2O00526 184 aa12.55□□□□□ -0.4
SSBP1-214ENST00000498107 SNAPC5O75971 98 aa12.55□□□□□ -0.4
SSBP1-214ENST00000498107 HLA-GP17693 338 aa12.55□□□□□ -0.4
SSBP1-214ENST00000498107 UCP1P25874 307 aa12.55□□□□□ -0.4
SSBP1-214ENST00000498107 PPIFP30405 207 aaKnown RBP12.55□□□□□ -0.4
SSBP1-214ENST00000498107 G6PCP35575 357 aa12.55□□□□□ -0.4
SSBP1-214ENST00000498107 CFHR3Q02985 330 aa12.55□□□□□ -0.4
SSBP1-214ENST00000498107 MRGPRG-AS1Q2M3A8 158 aa12.55□□□□□ -0.4
SSBP1-214ENST00000498107 C2orf68Q2NKX9 166 aa12.55□□□□□ -0.4
SSBP1-214ENST00000498107 TMEM65Q6PI78 240 aa12.55□□□□□ -0.4
SSBP1-214ENST00000498107 H2BFWTQ7Z2G1 175 aa12.55□□□□□ -0.4
SSBP1-214ENST00000498107 MINDY2Q8NBR6 621 aa12.55□□□□□ -0.4
SSBP1-214ENST00000498107 LFNGQ8NES3 379 aa12.55□□□□□ -0.4
SSBP1-214ENST00000498107 OR5M8Q8NGP6 311 aa12.55□□□□□ -0.4
SSBP1-214ENST00000498107 TP53RKQ96S44 253 aa12.55□□□□□ -0.4
SSBP1-214ENST00000498107 FAM103A1Q9BTL3 118 aaKnown RBP12.55□□□□□ -0.4
SSBP1-214ENST00000498107 COMMD5Q9GZQ3 224 aa12.55□□□□□ -0.4
SSBP1-214ENST00000498107 TMEM222Q9H0R3 208 aa12.55□□□□□ -0.4
SSBP1-214ENST00000498107 FKBP11Q9NYL4 201 aa12.55□□□□□ -0.4
SSBP1-214ENST00000498107 FOXA2Q9Y261 457 aaPredicted RBP12.55□□□□□ -0.4
SSBP1-214ENST00000498107 A0A1W2PN81 502 aa12.54□□□□□ -0.4
SSBP1-214ENST00000498107 G3V318 75 aa12.54□□□□□ -0.4
SSBP1-214ENST00000498107 LYRM1O43325 122 aa12.54□□□□□ -0.4
SSBP1-214ENST00000498107 IL6RP08887 468 aaPredicted RBP12.54□□□□□ -0.4
SSBP1-214ENST00000498107 OR5AC1P0C628 307 aa12.54□□□□□ -0.4
SSBP1-214ENST00000498107 EGR2P11161 476 aaPredicted RBP12.54□□□□□ -0.4
SSBP1-214ENST00000498107 AKR1C4P17516 323 aa12.54□□□□□ -0.4
SSBP1-214ENST00000498107 CHRNA7P36544 502 aa12.54□□□□□ -0.4
SSBP1-214ENST00000498107 RPL27AP46776 148 aaKnown RBP12.54□□□□□ -0.4
SSBP1-214ENST00000498107 SRPXP78539 464 aa12.54□□□□□ -0.4
SSBP1-214ENST00000498107 SSBP2P81877 361 aaPredicted RBP12.54□□□□□ -0.4
SSBP1-214ENST00000498107 TMEM128Q5BJH2 165 aa12.54□□□□□ -0.4
SSBP1-214ENST00000498107 KHDC1LQ5JSQ8 128 aa12.54□□□□□ -0.4
SSBP1-214ENST00000498107 TMED4Q7Z7H5 227 aa12.54□□□□□ -0.4
SSBP1-214ENST00000498107 RNF152Q8N8N0 203 aa12.54□□□□□ -0.4
SSBP1-214ENST00000498107 GALNT14Q96FL9 552 aa12.54□□□□□ -0.4
SSBP1-214ENST00000498107 SEC22AQ96IW7 307 aa12.54□□□□□ -0.4
SSBP1-214ENST00000498107 CITED2Q99967 270 aaPredicted RBP12.54□□□□□ -0.4
SSBP1-214ENST00000498107 FBXO7Q9Y3I1 522 aa12.54□□□□□ -0.4
SSBP1-214ENST00000498107 MSGN1A6NI15 193 aa12.53□□□□□ -0.4
SSBP1-214ENST00000498107 NDUFB6O95139 128 aa12.53□□□□□ -0.4
SSBP1-214ENST00000498107 SLC6A1P30531 599 aa12.53□□□□□ -0.4
SSBP1-214ENST00000498107 CCR6P51684 374 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 143.7 ms