RNA–Protein interactions for RNA: ENST00000496822.1

NEK4-206, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-206ENST00000496822 GPHA2Q96T91 129 aa11.55□□□□□ -0.56
NEK4-206ENST00000496822 ZNF430Q9H8G1 570 aaPredicted RBP11.55□□□□□ -0.56
NEK4-206ENST00000496822 RANGRFQ9HD47 186 aaPredicted RBP11.55□□□□□ -0.56
NEK4-206ENST00000496822 ANXA10Q9UJ72 324 aa11.55□□□□□ -0.56
NEK4-206ENST00000496822 MRPS7Q9Y2R9 242 aaKnown RBP11.55□□□□□ -0.56
NEK4-206ENST00000496822 A0A0G2JLM5 398 aa11.54□□□□□ -0.56
NEK4-206ENST00000496822 TUSC2O75896 110 aa11.54□□□□□ -0.56
NEK4-206ENST00000496822 BRI3O95415 125 aa11.54□□□□□ -0.56
NEK4-206ENST00000496822 PRH1P02810 166 aa11.54□□□□□ -0.56
NEK4-206ENST00000496822 CTXN2P0C2S0 81 aa11.54□□□□□ -0.56
NEK4-206ENST00000496822 PTHLHP12272 177 aa11.54□□□□□ -0.56
NEK4-206ENST00000496822 ZP3P21754 424 aa11.54□□□□□ -0.56
NEK4-206ENST00000496822 CBX5P45973 191 aa11.54□□□□□ -0.56
NEK4-206ENST00000496822 EIF4EBP1Q13541 118 aaPredicted RBP11.54□□□□□ -0.56
NEK4-206ENST00000496822 CDK10Q15131 360 aa11.54□□□□□ -0.56
NEK4-206ENST00000496822 ZNF343Q6P1L6 599 aa11.54□□□□□ -0.56
NEK4-206ENST00000496822 VKORC1L1Q8N0U8 176 aa11.54□□□□□ -0.56
NEK4-206ENST00000496822 GVQW1Q8N7I0 195 aa11.54□□□□□ -0.56
NEK4-206ENST00000496822 RSRP1Q9BUV0 290 aa11.54□□□□□ -0.56
NEK4-206ENST00000496822 AUNIPQ9H7T9 357 aa11.54□□□□□ -0.56
NEK4-206ENST00000496822 SCPEP1Q9HB40 452 aa11.54□□□□□ -0.56
NEK4-206ENST00000496822 STAB2Q8WWQ8 2551 aa11.53□□□□□ -0.56
NEK4-206ENST00000496822 MPPED1O15442 326 aa11.53□□□□□ -0.56
NEK4-206ENST00000496822 IGLV1-51P01701 117 aa11.53□□□□□ -0.56
NEK4-206ENST00000496822 FCER2P06734 321 aa11.53□□□□□ -0.56
NEK4-206ENST00000496822 OR9G9P0C7N8 305 aa11.53□□□□□ -0.56
NEK4-206ENST00000496822 FRMD6-AS1P0C7T7 363 aa11.53□□□□□ -0.56
NEK4-206ENST00000496822 AADACP22760 399 aa11.53□□□□□ -0.56
NEK4-206ENST00000496822 PRSS3P35030 304 aa11.53□□□□□ -0.56
NEK4-206ENST00000496822 SYNJ2BPP57105 145 aa11.53□□□□□ -0.56
NEK4-206ENST00000496822 BRWD1-AS2P59051 145 aa11.53□□□□□ -0.56
NEK4-206ENST00000496822 ZNF45Q02386 682 aa11.53□□□□□ -0.56
NEK4-206ENST00000496822 KLF5Q13887 457 aaPredicted RBP11.53□□□□□ -0.56
NEK4-206ENST00000496822 IL34Q6ZMJ4 242 aa11.53□□□□□ -0.56
NEK4-206ENST00000496822 C19orf35Q6ZS72 473 aa11.53□□□□□ -0.56
NEK4-206ENST00000496822 TCTEX1D2Q8WW35 142 aa11.53□□□□□ -0.56
NEK4-206ENST00000496822 ELOVL1Q9BW60 279 aa11.53□□□□□ -0.56
NEK4-206ENST00000496822 PRELID3BQ9Y3B1 194 aa11.53□□□□□ -0.56
NEK4-206ENST00000496822 SULT1C2O00338 296 aa11.52□□□□□ -0.57
NEK4-206ENST00000496822 ETV6P41212 452 aa11.52□□□□□ -0.57
NEK4-206ENST00000496822 CCDC190Q86UF4 302 aa11.52□□□□□ -0.57
NEK4-206ENST00000496822 SNX29P2Q8IUI4 249 aa11.52□□□□□ -0.57
NEK4-206ENST00000496822 BEST4Q8NFU0 473 aa11.52□□□□□ -0.57
NEK4-206ENST00000496822 AKIP1Q9NQ31 210 aa11.52□□□□□ -0.57
NEK4-206ENST00000496822 TAS2R8Q9NYW2 309 aa11.52□□□□□ -0.57
NEK4-206ENST00000496822 PEF1Q9UBV8 284 aaKnown RBP11.52□□□□□ -0.57
NEK4-206ENST00000496822 SORL1Q92673 2214 aa11.52□□□□□ -0.57
NEK4-206ENST00000496822 HMX3A6NHT5 357 aa11.51□□□□□ -0.57
NEK4-206ENST00000496822 TEX22C9J3V5 150 aa11.51□□□□□ -0.57
NEK4-206ENST00000496822 CTDSPLO15194 276 aa11.51□□□□□ -0.57
NEK4-206ENST00000496822 SLC22A5O76082 557 aa11.51□□□□□ -0.57
NEK4-206ENST00000496822 ARPC4P59998 168 aa11.51□□□□□ -0.57
NEK4-206ENST00000496822 RHOGP84095 191 aa11.51□□□□□ -0.57
NEK4-206ENST00000496822 HOGA1Q86XE5 327 aa11.51□□□□□ -0.57
NEK4-206ENST00000496822 MMD2Q8IY49 270 aa11.51□□□□□ -0.57
NEK4-206ENST00000496822 OR9G4Q8NGQ1 327 aa11.51□□□□□ -0.57
NEK4-206ENST00000496822 OR4S2Q8NH73 311 aa11.51□□□□□ -0.57
NEK4-206ENST00000496822 FCAMRQ8WWV6 532 aa11.51□□□□□ -0.57
NEK4-206ENST00000496822 USMG5Q96IX5 58 aa11.51□□□□□ -0.57
NEK4-206ENST00000496822 HSD17B10Q99714 261 aaKnown RBP11.51□□□□□ -0.57
NEK4-206ENST00000496822 IFT46Q9NQC8 304 aa11.51□□□□□ -0.57
NEK4-206ENST00000496822 TNCP24821 2201 aa11.51□□□□□ -0.57
NEK4-206ENST00000496822 DNAH7Q8WXX0 4024 aa11.5□□□□□ -0.57
NEK4-206ENST00000496822 TRBV9A0A0B4J1U6 114 aa11.5□□□□□ -0.57
NEK4-206ENST00000496822 A0A1B0GW64 132 aa11.5□□□□□ -0.57
NEK4-206ENST00000496822 E7EUB6 86 aa11.5□□□□□ -0.57
NEK4-206ENST00000496822 GABARAPH6UMI1 98 aa11.5□□□□□ -0.57
NEK4-206ENST00000496822 TNFSF12O43508 249 aa11.5□□□□□ -0.57
NEK4-206ENST00000496822 ACTL6BO94805 426 aa11.5□□□□□ -0.57
NEK4-206ENST00000496822 FCGR2CP31995 323 aa11.5□□□□□ -0.57
NEK4-206ENST00000496822 EXOSC2Q13868 293 aaKnown RBP11.5□□□□□ -0.57
NEK4-206ENST00000496822 PYDC2Q56P42 97 aa11.5□□□□□ -0.57
NEK4-206ENST00000496822 PUSL1Q8N0Z8 303 aaKnown RBP11.5□□□□□ -0.57
NEK4-206ENST00000496822 Q8N1Y9 231 aa11.5□□□□□ -0.57
NEK4-206ENST00000496822 MFSD4AQ8N468 514 aa11.5□□□□□ -0.57
NEK4-206ENST00000496822 SECTM1Q8WVN6 248 aa11.5□□□□□ -0.57
NEK4-206ENST00000496822 SNAPC3Q92966 411 aa11.5□□□□□ -0.57
NEK4-206ENST00000496822 WDR12Q9GZL7 423 aaKnown RBP11.5□□□□□ -0.57
NEK4-206ENST00000496822 CCL28Q9NRJ3 127 aa11.5□□□□□ -0.57
NEK4-206ENST00000496822 MEIS3P1A6NDR6 274 aa11.49□□□□□ -0.57
NEK4-206ENST00000496822 BMPR1BO00238 502 aa11.49□□□□□ -0.57
NEK4-206ENST00000496822 CREBL2O60519 120 aaPredicted RBP11.49□□□□□ -0.57
NEK4-206ENST00000496822 KBTBD11O94819 623 aa11.49□□□□□ -0.57
NEK4-206ENST00000496822 OR2A4O95047 310 aa11.49□□□□□ -0.57
NEK4-206ENST00000496822 MYOD1P15172 320 aa11.49□□□□□ -0.57
NEK4-206ENST00000496822 SSBP1Q04837 148 aaKnown RBP11.49□□□□□ -0.57
NEK4-206ENST00000496822 ZNF846Q147U1 533 aa11.49□□□□□ -0.57
NEK4-206ENST00000496822 RPEL1Q2QD12 228 aa11.49□□□□□ -0.57
NEK4-206ENST00000496822 ZNF66Q6ZN08 573 aa11.49□□□□□ -0.57
NEK4-206ENST00000496822 SSX9Q7RTT3 188 aa11.49□□□□□ -0.57
NEK4-206ENST00000496822 TTC9CQ8N5M4 171 aa11.49□□□□□ -0.57
NEK4-206ENST00000496822 GDPD1Q8N9F7 314 aa11.49□□□□□ -0.57
NEK4-206ENST00000496822 TMEM167AQ8TBQ9 72 aa11.49□□□□□ -0.57
NEK4-206ENST00000496822 RCHY1Q96PM5 261 aa11.49□□□□□ -0.57
NEK4-206ENST00000496822 OR2A7Q96R45 310 aa11.49□□□□□ -0.57
NEK4-206ENST00000496822 SPIN2AQ99865 258 aa11.49□□□□□ -0.57
NEK4-206ENST00000496822 SPIN2BQ9BPZ2 258 aa11.49□□□□□ -0.57
NEK4-206ENST00000496822 V9GYH0 126 aa11.49□□□□□ -0.57
NEK4-206ENST00000496822 FAM223BA6NKX1 122 aa11.48□□□□□ -0.57
NEK4-206ENST00000496822 OR2J3O76001 311 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms