RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 TAGLN2P37802 199 aaKnown RBP10.71□□□□□ -0.69
GARNL3-220ENST00000496711 DLK1P80370 383 aa10.71□□□□□ -0.69
GARNL3-220ENST00000496711 POU2AF1Q16633 256 aa10.71□□□□□ -0.69
GARNL3-220ENST00000496711 NCMAPQ5T1S8 102 aa10.71□□□□□ -0.69
GARNL3-220ENST00000496711 RBMS3Q6XE24 437 aaKnown RBP10.71□□□□□ -0.69
GARNL3-220ENST00000496711 ZFP82Q8N141 532 aa10.71□□□□□ -0.69
GARNL3-220ENST00000496711 C2CD4CQ8TF44 421 aa10.71□□□□□ -0.69
GARNL3-220ENST00000496711 GGACTQ9BVM4 153 aa10.71□□□□□ -0.69
GARNL3-220ENST00000496711 ACTR3CQ9C0K3 210 aaPredicted RBP10.71□□□□□ -0.69
GARNL3-220ENST00000496711 DYNLRB1Q9NP97 96 aa10.71□□□□□ -0.69
GARNL3-220ENST00000496711 FOXA2Q9Y261 457 aaPredicted RBP10.71□□□□□ -0.69
GARNL3-220ENST00000496711 ATMQ13315 3056 aa10.71□□□□□ -0.7
GARNL3-220ENST00000496711 PIEZO2Q9H5I5 2752 aa10.71□□□□□ -0.7
GARNL3-220ENST00000496711 SOX15O60248 233 aa10.7□□□□□ -0.7
GARNL3-220ENST00000496711 MPDU1O75352 247 aa10.7□□□□□ -0.7
GARNL3-220ENST00000496711 RAB5AP20339 215 aa10.7□□□□□ -0.7
GARNL3-220ENST00000496711 RPL31P62899 125 aaKnown RBP10.7□□□□□ -0.7
GARNL3-220ENST00000496711 HABP2Q14520 560 aaPredicted RBP10.7□□□□□ -0.7
GARNL3-220ENST00000496711 DMRTC2Q8IXT2 367 aaPredicted RBP10.7□□□□□ -0.7
GARNL3-220ENST00000496711 FAM24BQ8N5W8 94 aa10.7□□□□□ -0.7
GARNL3-220ENST00000496711 ZCCHC14Q8WYQ9 949 aaKnown RBP10.7□□□□□ -0.7
GARNL3-220ENST00000496711 RNASE6Q93091 150 aaKnown RBP10.7□□□□□ -0.7
GARNL3-220ENST00000496711 TMEM14BQ9NUH8 114 aa10.7□□□□□ -0.7
GARNL3-220ENST00000496711 TMEM106BQ9NUM4 274 aa10.7□□□□□ -0.7
GARNL3-220ENST00000496711 KLF2Q9Y5W3 355 aaPredicted RBP10.7□□□□□ -0.7
GARNL3-220ENST00000496711 CEP295Q9C0D2 2601 aa10.7□□□□□ -0.7
GARNL3-220ENST00000496711 SMCO3A2RU48 225 aa10.7□□□□□ -0.7
GARNL3-220ENST00000496711 PRSS46E5RG02 174 aa10.7□□□□□ -0.7
GARNL3-220ENST00000496711 RRHO14718 337 aa10.7□□□□□ -0.7
GARNL3-220ENST00000496711 NDUFA2O43678 99 aa10.7□□□□□ -0.7
GARNL3-220ENST00000496711 EIF3GO75821 320 aaKnown RBP eCLIP10.7□□□□□ -0.7
GARNL3-220ENST00000496711 MAS1LP35410 378 aa10.7□□□□□ -0.7
GARNL3-220ENST00000496711 PNRC1Q12796 327 aaPredicted RBP10.7□□□□□ -0.7
GARNL3-220ENST00000496711 RTL8BQ17RB0 113 aa10.7□□□□□ -0.7
GARNL3-220ENST00000496711 ACOT6Q3I5F7 207 aaPredicted RBP10.7□□□□□ -0.7
GARNL3-220ENST00000496711 Q8N7P7 452 aa10.7□□□□□ -0.7
GARNL3-220ENST00000496711 ZNF714Q96N38 554 aa10.7□□□□□ -0.7
GARNL3-220ENST00000496711 YPEL4Q96NS1 127 aa10.7□□□□□ -0.7
GARNL3-220ENST00000496711 MANBALQ9NQG1 85 aa10.7□□□□□ -0.7
GARNL3-220ENST00000496711 hCG_1809904A0A1W2PP81 198 aa10.69□□□□□ -0.7
GARNL3-220ENST00000496711 A0A1W2PR64 198 aa10.69□□□□□ -0.7
GARNL3-220ENST00000496711 A0A1W2PRV1 198 aa10.69□□□□□ -0.7
GARNL3-220ENST00000496711 E7EQL1 145 aa10.69□□□□□ -0.7
GARNL3-220ENST00000496711 HMGB3O15347 200 aaKnown RBP10.69□□□□□ -0.7
GARNL3-220ENST00000496711 CYB5BO43169 146 aa10.69□□□□□ -0.7
GARNL3-220ENST00000496711 CDC34P49427 236 aaPredicted RBP10.69□□□□□ -0.7
GARNL3-220ENST00000496711 UCNP55089 124 aa10.69□□□□□ -0.7
GARNL3-220ENST00000496711 HSPE1P61604 102 aaKnown RBP10.69□□□□□ -0.7
GARNL3-220ENST00000496711 MEF2BQ02080 365 aaPredicted RBP10.69□□□□□ -0.7
GARNL3-220ENST00000496711 HEPN1Q6WQI6 88 aa10.69□□□□□ -0.7
GARNL3-220ENST00000496711 ZNF833PQ6ZTB9 187 aa10.69□□□□□ -0.7
GARNL3-220ENST00000496711 CCL17Q92583 94 aa10.69□□□□□ -0.7
GARNL3-220ENST00000496711 ENY2Q9NPA8 101 aa10.69□□□□□ -0.7
GARNL3-220ENST00000496711 SLC35D1Q9NTN3 355 aa10.69□□□□□ -0.7
GARNL3-220ENST00000496711 PRELID1Q9Y255 219 aa10.69□□□□□ -0.7
GARNL3-220ENST00000496711 ARFGEF3Q5TH69 2177 aa10.68□□□□□ -0.7
GARNL3-220ENST00000496711 B4DEV8 164 aa10.68□□□□□ -0.7
GARNL3-220ENST00000496711 NDUFB3O43676 98 aa10.68□□□□□ -0.7
GARNL3-220ENST00000496711 FCN3O75636 299 aa10.68□□□□□ -0.7
GARNL3-220ENST00000496711 CT45A6P0DMU7 189 aa10.68□□□□□ -0.7
GARNL3-220ENST00000496711 CT45A5P0DMU8 189 aa10.68□□□□□ -0.7
GARNL3-220ENST00000496711 CT45A7P0DMV0 189 aa10.68□□□□□ -0.7
GARNL3-220ENST00000496711 CCL3L1P16619 93 aa10.68□□□□□ -0.7
GARNL3-220ENST00000496711 AGAP20933 346 aa10.68□□□□□ -0.7
GARNL3-220ENST00000496711 PSMB3P49720 205 aa10.68□□□□□ -0.7
GARNL3-220ENST00000496711 CASP6P55212 293 aa10.68□□□□□ -0.7
GARNL3-220ENST00000496711 TREML4Q6UXN2 200 aa10.68□□□□□ -0.7
GARNL3-220ENST00000496711 ABHD12Q8N2K0 398 aa10.68□□□□□ -0.7
GARNL3-220ENST00000496711 SLC24A4Q8NFF2 622 aa10.68□□□□□ -0.7
GARNL3-220ENST00000496711 OR13D1Q8NGV5 346 aa10.68□□□□□ -0.7
GARNL3-220ENST00000496711 TMEM170AQ8WVE7 144 aa10.68□□□□□ -0.7
GARNL3-220ENST00000496711 NEUROG1Q92886 237 aa10.68□□□□□ -0.7
GARNL3-220ENST00000496711 RAB24Q969Q5 203 aa10.68□□□□□ -0.7
GARNL3-220ENST00000496711 MALSU1Q96EH3 234 aa10.68□□□□□ -0.7
GARNL3-220ENST00000496711 MS4A5Q9H3V2 200 aa10.68□□□□□ -0.7
GARNL3-220ENST00000496711 SIRT7Q9NRC8 400 aa10.68□□□□□ -0.7
GARNL3-220ENST00000496711 PRNDQ9UKY0 176 aa10.68□□□□□ -0.7
GARNL3-220ENST00000496711 SEC14L6B5MCN3 397 aa10.68□□□□□ -0.7
GARNL3-220ENST00000496711 IFNA4P05014 189 aa10.68□□□□□ -0.7
GARNL3-220ENST00000496711 CD3EP07766 207 aa10.68□□□□□ -0.7
GARNL3-220ENST00000496711 NPY1RP25929 384 aa10.68□□□□□ -0.7
GARNL3-220ENST00000496711 PLA2G5P39877 138 aa10.68□□□□□ -0.7
GARNL3-220ENST00000496711 LRRC10Q5BKY1 277 aa10.68□□□□□ -0.7
GARNL3-220ENST00000496711 TMEM200BQ69YZ2 307 aa10.68□□□□□ -0.7
GARNL3-220ENST00000496711 H1FXQ92522 213 aaKnown RBP10.68□□□□□ -0.7
GARNL3-220ENST00000496711 TMPRSS5Q9H3S3 457 aa10.68□□□□□ -0.7
GARNL3-220ENST00000496711 ZNRD1Q9P1U0 126 aa10.68□□□□□ -0.7
GARNL3-220ENST00000496711 CXorf65A6NEN9 183 aa10.67□□□□□ -0.7
GARNL3-220ENST00000496711 ZNF727A8MUV8 499 aa10.67□□□□□ -0.7
GARNL3-220ENST00000496711 TNFRSF13BO14836 293 aaPredicted RBP10.67□□□□□ -0.7
GARNL3-220ENST00000496711 NDUFS6O75380 124 aaKnown RBP10.67□□□□□ -0.7
GARNL3-220ENST00000496711 OPRK1P41145 380 aa10.67□□□□□ -0.7
GARNL3-220ENST00000496711 CD81P60033 236 aa10.67□□□□□ -0.7
GARNL3-220ENST00000496711 EFNB3Q15768 340 aa10.67□□□□□ -0.7
GARNL3-220ENST00000496711 LYPD2Q6UXB3 125 aa10.67□□□□□ -0.7
GARNL3-220ENST00000496711 KCNIP2Q9NS61 270 aa10.67□□□□□ -0.7
GARNL3-220ENST00000496711 ZNF257Q9Y2Q1 563 aa10.67□□□□□ -0.7
GARNL3-220ENST00000496711 OR51B2Q9Y5P1 312 aa10.67□□□□□ -0.7
GARNL3-220ENST00000496711 TLN1Q9Y490 2541 aaKnown RBP10.67□□□□□ -0.7
GARNL3-220ENST00000496711 DMXL2Q8TDJ6 3036 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms