RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 FLNCQ14315 2725 aa5.17□□□□□ -1.58
SSBP1-213ENST00000496622 KIAA2026Q5HYC2 2103 aa5.17□□□□□ -1.58
SSBP1-213ENST00000496622 ZNF816-ZNF321PA0A0X1KG74 233 aa5.17□□□□□ -1.58
SSBP1-213ENST00000496622 IGSF23A1L1A6 192 aa5.17□□□□□ -1.58
SSBP1-213ENST00000496622 GAGE12BA1L429 117 aa5.17□□□□□ -1.58
SSBP1-213ENST00000496622 NKX2-6A6NCS4 301 aa5.17□□□□□ -1.58
SSBP1-213ENST00000496622 EEF1E1-BLOC1S5C9J1V9 151 aa5.17□□□□□ -1.58
SSBP1-213ENST00000496622 MFNGO00587 321 aa5.17□□□□□ -1.58
SSBP1-213ENST00000496622 RAB29O14966 203 aa5.17□□□□□ -1.58
SSBP1-213ENST00000496622 TSPAN15O95858 294 aa5.17□□□□□ -1.58
SSBP1-213ENST00000496622 OR5AC1P0C628 307 aa5.17□□□□□ -1.58
SSBP1-213ENST00000496622 ESDP10768 282 aa5.17□□□□□ -1.58
SSBP1-213ENST00000496622 BCL3P20749 454 aa5.17□□□□□ -1.58
SSBP1-213ENST00000496622 MPV17P39210 176 aa5.17□□□□□ -1.58
SSBP1-213ENST00000496622 UBA52P62987 128 aaKnown RBP5.17□□□□□ -1.58
SSBP1-213ENST00000496622 GUSBP1Q15486 140 aa5.17□□□□□ -1.58
SSBP1-213ENST00000496622 TMEM42Q69YG0 159 aa5.17□□□□□ -1.58
SSBP1-213ENST00000496622 IGFL3Q6UXB1 125 aa5.17□□□□□ -1.58
SSBP1-213ENST00000496622 Q6ZPA2 131 aa5.17□□□□□ -1.58
SSBP1-213ENST00000496622 OR2W3Q7Z3T1 314 aa5.17□□□□□ -1.58
SSBP1-213ENST00000496622 DOLPP1Q86YN1 238 aa5.17□□□□□ -1.58
SSBP1-213ENST00000496622 WDR31Q8NA23 367 aa5.17□□□□□ -1.58
SSBP1-213ENST00000496622 NECAP1Q8NC96 275 aa5.17□□□□□ -1.58
SSBP1-213ENST00000496622 ADAD2Q8NCV1 583 aaKnown RBP5.17□□□□□ -1.58
SSBP1-213ENST00000496622 OR4A4PQ8NGN8 299 aa5.17□□□□□ -1.58
SSBP1-213ENST00000496622 OR52E5Q8NH55 327 aa5.17□□□□□ -1.58
SSBP1-213ENST00000496622 UBALD1Q8TB05 177 aa5.17□□□□□ -1.58
SSBP1-213ENST00000496622 ST6GALNAC6Q969X2 333 aa5.17□□□□□ -1.58
SSBP1-213ENST00000496622 APOBEC3DQ96AK3 386 aaPredicted RBP5.17□□□□□ -1.58
SSBP1-213ENST00000496622 CIB3Q96Q77 187 aaPredicted RBP5.17□□□□□ -1.58
SSBP1-213ENST00000496622 GPHA2Q96T91 129 aa5.17□□□□□ -1.58
SSBP1-213ENST00000496622 C20orf144Q9BQM9 153 aa5.17□□□□□ -1.58
SSBP1-213ENST00000496622 LPAR3Q9UBY5 353 aa5.17□□□□□ -1.58
SSBP1-213ENST00000496622 RNF115Q9Y4L5 304 aa5.17□□□□□ -1.58
SSBP1-213ENST00000496622 CENPEQ02224 2701 aa5.16□□□□□ -1.58
SSBP1-213ENST00000496622 CD3EP07766 207 aa5.16□□□□□ -1.58
SSBP1-213ENST00000496622 SFTA3P0C7M3 94 aa5.16□□□□□ -1.58
SSBP1-213ENST00000496622 OR5H8P0DN80 308 aa5.16□□□□□ -1.58
SSBP1-213ENST00000496622 PGAM2P15259 253 aa5.16□□□□□ -1.58
SSBP1-213ENST00000496622 CHATP28329 748 aa5.16□□□□□ -1.58
SSBP1-213ENST00000496622 PPOXP50336 477 aa5.16□□□□□ -1.58
SSBP1-213ENST00000496622 H2BFSP57053 126 aa5.16□□□□□ -1.58
SSBP1-213ENST00000496622 TAS2R19P59542 299 aa5.16□□□□□ -1.58
SSBP1-213ENST00000496622 ERVK11-1P61568 191 aa5.16□□□□□ -1.58
SSBP1-213ENST00000496622 PSG7Q13046 419 aa5.16□□□□□ -1.58
SSBP1-213ENST00000496622 GAGE5Q13069 117 aa5.16□□□□□ -1.58
SSBP1-213ENST00000496622 GAGE6Q13070 117 aa5.16□□□□□ -1.58
SSBP1-213ENST00000496622 TBR1Q16650 682 aa5.16□□□□□ -1.58
SSBP1-213ENST00000496622 MLANAQ16655 118 aa5.16□□□□□ -1.58
SSBP1-213ENST00000496622 NRN1LQ496H8 165 aa5.16□□□□□ -1.58
SSBP1-213ENST00000496622 AWAT1Q58HT5 328 aa5.16□□□□□ -1.58
SSBP1-213ENST00000496622 SPATA31B1PQ5VZV4 182 aa5.16□□□□□ -1.58
SSBP1-213ENST00000496622 EIF5AL1Q6IS14 154 aaKnown RBP5.16□□□□□ -1.58
SSBP1-213ENST00000496622 ZNF826PQ6ZT77 177 aa5.16□□□□□ -1.58
SSBP1-213ENST00000496622 OR1J1Q8NGS3 322 aa5.16□□□□□ -1.58
SSBP1-213ENST00000496622 SLC25A40Q8TBP6 338 aa5.16□□□□□ -1.58
SSBP1-213ENST00000496622 ARL11Q969Q4 196 aa5.16□□□□□ -1.58
SSBP1-213ENST00000496622 PECRQ9BY49 303 aa5.16□□□□□ -1.58
SSBP1-213ENST00000496622 LIME1Q9H400 295 aa5.16□□□□□ -1.58
SSBP1-213ENST00000496622 PIPOXQ9P0Z9 390 aa5.16□□□□□ -1.58
SSBP1-213ENST00000496622 VSIG4Q9Y279 399 aa5.16□□□□□ -1.58
SSBP1-213ENST00000496622 FAM96BQ9Y3D0 163 aa5.16□□□□□ -1.58
SSBP1-213ENST00000496622 MED13LQ71F56 2210 aa5.16□□□□□ -1.58
SSBP1-213ENST00000496622 UTP20O75691 2785 aaKnown RBP5.16□□□□□ -1.58
SSBP1-213ENST00000496622 B5MCH6 92 aa5.16□□□□□ -1.58
SSBP1-213ENST00000496622 GRPP07492 148 aa5.16□□□□□ -1.58
SSBP1-213ENST00000496622 CECR9P0C854 216 aa5.16□□□□□ -1.58
SSBP1-213ENST00000496622 HKR1P10072 659 aa5.16□□□□□ -1.58
SSBP1-213ENST00000496622 CCKARP32238 428 aa5.16□□□□□ -1.58
SSBP1-213ENST00000496622 ZNF83P51522 516 aa5.16□□□□□ -1.58
SSBP1-213ENST00000496622 TGFBR3Q03167 851 aa5.16□□□□□ -1.58
SSBP1-213ENST00000496622 MALLQ13021 153 aa5.16□□□□□ -1.58
SSBP1-213ENST00000496622 TMEM41BQ5BJD5 291 aa5.16□□□□□ -1.58
SSBP1-213ENST00000496622 ACSM6Q6P461 480 aa5.16□□□□□ -1.58
SSBP1-213ENST00000496622 Q6ZSR3 168 aa5.16□□□□□ -1.58
SSBP1-213ENST00000496622 WDR86Q86TI4 376 aa5.16□□□□□ -1.58
SSBP1-213ENST00000496622 LGI3Q8N145 548 aa5.16□□□□□ -1.58
SSBP1-213ENST00000496622 GALMQ96C23 342 aa5.16□□□□□ -1.58
SSBP1-213ENST00000496622 THYN1Q9P016 225 aa5.16□□□□□ -1.58
SSBP1-213ENST00000496622 AK3Q9UIJ7 227 aa5.16□□□□□ -1.58
SSBP1-213ENST00000496622 CELSR1Q9NYQ6 3014 aa5.16□□□□□ -1.58
SSBP1-213ENST00000496622 ANKHD1Q8IWZ3 2542 aaKnown RBP5.16□□□□□ -1.58
SSBP1-213ENST00000496622 ARHGAP21Q5T5U3 1957 aa5.15□□□□□ -1.58
SSBP1-213ENST00000496622 FXYD6-FXYD2A0A087WZ82 144 aa5.15□□□□□ -1.58
SSBP1-213ENST00000496622 KRTAP9-6A0A140TA67 174 aa5.15□□□□□ -1.58
SSBP1-213ENST00000496622 OR5B21A6NL26 309 aa5.15□□□□□ -1.58
SSBP1-213ENST00000496622 FOXI3A8MTJ6 420 aaPredicted RBP5.15□□□□□ -1.58
SSBP1-213ENST00000496622 HMSDA8MTL9 139 aa5.15□□□□□ -1.58
SSBP1-213ENST00000496622 K7ENP7 123 aa5.15□□□□□ -1.58
SSBP1-213ENST00000496622 CGAP01215 116 aa5.15□□□□□ -1.58
SSBP1-213ENST00000496622 SERPINE2P07093 398 aa5.15□□□□□ -1.58
SSBP1-213ENST00000496622 FUT6P51993 359 aa5.15□□□□□ -1.58
SSBP1-213ENST00000496622 PPP1CBP62140 327 aa5.15□□□□□ -1.58
SSBP1-213ENST00000496622 LCN2P80188 198 aa5.15□□□□□ -1.58
SSBP1-213ENST00000496622 MZT1Q08AG7 82 aa5.15□□□□□ -1.58
SSBP1-213ENST00000496622 PRSS8Q16651 343 aa5.15□□□□□ -1.58
SSBP1-213ENST00000496622 LRRC37A5PQ49AS3 106 aa5.15□□□□□ -1.58
SSBP1-213ENST00000496622 PRR31Q5SQ13 230 aa5.15□□□□□ -1.58
SSBP1-213ENST00000496622 TMEM211Q6ICI0 200 aa5.15□□□□□ -1.58
SSBP1-213ENST00000496622 GLDNQ6ZMI3 551 aaPredicted RBP5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms