RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 WDR59Q6PJI9 974 aa2.08□□□□□ -2.08
CLK1-214ENST00000496205 Q6ZQT7 251 aa2.08□□□□□ -2.08
CLK1-214ENST00000496205 LYZL2Q7Z4W2 148 aa2.08□□□□□ -2.08
CLK1-214ENST00000496205 OR13C8Q8NGS7 320 aa2.08□□□□□ -2.08
CLK1-214ENST00000496205 OR2T4Q8NH00 348 aa2.08□□□□□ -2.08
CLK1-214ENST00000496205 MRPL30Q8TCC3 161 aaKnown RBP2.08□□□□□ -2.08
CLK1-214ENST00000496205 ACOT12Q8WYK0 555 aa2.08□□□□□ -2.08
CLK1-214ENST00000496205 MALSU1Q96EH3 234 aa2.08□□□□□ -2.08
CLK1-214ENST00000496205 SPIN2AQ99865 258 aa2.08□□□□□ -2.08
CLK1-214ENST00000496205 SPIN2BQ9BPZ2 258 aa2.08□□□□□ -2.08
CLK1-214ENST00000496205 ZNF2Q9BSG1 426 aaPredicted RBP2.08□□□□□ -2.08
CLK1-214ENST00000496205 TMEM222Q9H0R3 208 aa2.08□□□□□ -2.08
CLK1-214ENST00000496205 ACER3Q9NUN7 267 aa2.08□□□□□ -2.08
CLK1-214ENST00000496205 UQCC1Q9NVA1 299 aa2.08□□□□□ -2.08
CLK1-214ENST00000496205 PRNDQ9UKY0 176 aa2.08□□□□□ -2.08
CLK1-214ENST00000496205 SSR3Q9UNL2 185 aa2.08□□□□□ -2.08
CLK1-214ENST00000496205 SLC35A3Q9Y2D2 325 aa2.08□□□□□ -2.08
CLK1-214ENST00000496205 PHLDA3Q9Y5J5 127 aa2.08□□□□□ -2.08
CLK1-214ENST00000496205 PLXNB3Q9ULL4 1909 aa2.08□□□□□ -2.08
CLK1-214ENST00000496205 DHX57Q6P158 1386 aaKnown RBP2.08□□□□□ -2.08
CLK1-214ENST00000496205 NUP214P35658 2090 aaPredicted RBP2.08□□□□□ -2.08
CLK1-214ENST00000496205 ANKRD12Q6UB98 2062 aa2.07□□□□□ -2.08
CLK1-214ENST00000496205 IGLV4-60A0A075B6I1 120 aa2.07□□□□□ -2.08
CLK1-214ENST00000496205 hCG_1818297A0A087WSY0 165 aa2.07□□□□□ -2.08
CLK1-214ENST00000496205 IGKV1-12A0A0C4DH73 117 aa2.07□□□□□ -2.08
CLK1-214ENST00000496205 DHRS12A0PJE2 317 aa2.07□□□□□ -2.08
CLK1-214ENST00000496205 TMEM150BA6NC51 233 aa2.07□□□□□ -2.08
CLK1-214ENST00000496205 A8MT66 165 aa2.07□□□□□ -2.08
CLK1-214ENST00000496205 C9JCJ5 164 aa2.07□□□□□ -2.08
CLK1-214ENST00000496205 H7C1C5 153 aa2.07□□□□□ -2.08
CLK1-214ENST00000496205 LST1O00453 97 aa2.07□□□□□ -2.08
CLK1-214ENST00000496205 SLC17A3O00476 420 aa2.07□□□□□ -2.08
CLK1-214ENST00000496205 HMGB3O15347 200 aaKnown RBP2.07□□□□□ -2.08
CLK1-214ENST00000496205 PIAS1O75925 651 aa2.07□□□□□ -2.08
CLK1-214ENST00000496205 ZNF682O95780 498 aa2.07□□□□□ -2.08
CLK1-214ENST00000496205 IGKV1D-12P01611 117 aa2.07□□□□□ -2.08
CLK1-214ENST00000496205 NPPCP23582 126 aa2.07□□□□□ -2.08
CLK1-214ENST00000496205 S100GP29377 79 aa2.07□□□□□ -2.08
CLK1-214ENST00000496205 GTF2A1P52655 376 aaPredicted RBP2.07□□□□□ -2.08
CLK1-214ENST00000496205 LCN6P62502 163 aa2.07□□□□□ -2.08
CLK1-214ENST00000496205 BSPH1Q075Z2 132 aa2.07□□□□□ -2.08
CLK1-214ENST00000496205 SMCO1Q147U7 214 aa2.07□□□□□ -2.08
CLK1-214ENST00000496205 OR8G1Q15617 311 aa2.07□□□□□ -2.08
CLK1-214ENST00000496205 TNFAIP8L3Q5GJ75 292 aa2.07□□□□□ -2.08
CLK1-214ENST00000496205 TMEM78Q5T7P6 136 aa2.07□□□□□ -2.08
CLK1-214ENST00000496205 DCUN1D2Q6PH85 259 aa2.07□□□□□ -2.08
CLK1-214ENST00000496205 H1FOOQ8IZA3 346 aaPredicted RBP2.07□□□□□ -2.08
CLK1-214ENST00000496205 ZFAND2AQ8N6M9 145 aa2.07□□□□□ -2.08
CLK1-214ENST00000496205 TMEM105Q8N8V8 129 aa2.07□□□□□ -2.08
CLK1-214ENST00000496205 ST20-AS1Q8NBB2 130 aa2.07□□□□□ -2.08
CLK1-214ENST00000496205 OR10K1Q8NGX5 313 aa2.07□□□□□ -2.08
CLK1-214ENST00000496205 CD200R1Q8TD46 325 aa2.07□□□□□ -2.08
CLK1-214ENST00000496205 GPR119Q8TDV5 335 aa2.07□□□□□ -2.08
CLK1-214ENST00000496205 RAB2BQ8WUD1 216 aa2.07□□□□□ -2.08
CLK1-214ENST00000496205 HIST1H2BAQ96A08 127 aa2.07□□□□□ -2.08
CLK1-214ENST00000496205 C2orf50Q96LR7 162 aa2.07□□□□□ -2.08
CLK1-214ENST00000496205 PBDC1Q9BVG4 233 aa2.07□□□□□ -2.08
CLK1-214ENST00000496205 MND1Q9BWT6 205 aa2.07□□□□□ -2.08
CLK1-214ENST00000496205 CHST6Q9GZX3 395 aa2.07□□□□□ -2.08
CLK1-214ENST00000496205 PBOV1Q9GZY1 135 aa2.07□□□□□ -2.08
CLK1-214ENST00000496205 RNASE7Q9H1E1 156 aaKnown RBP2.07□□□□□ -2.08
CLK1-214ENST00000496205 LINC00574Q9H8X3 128 aa2.07□□□□□ -2.08
CLK1-214ENST00000496205 RNF122Q9H9V4 155 aa2.07□□□□□ -2.08
CLK1-214ENST00000496205 CXorf21Q9HAI6 301 aa2.07□□□□□ -2.08
CLK1-214ENST00000496205 XAGE1AQ9HD64 81 aa2.07□□□□□ -2.08
CLK1-214ENST00000496205 ZNF586Q9NXT0 402 aa2.07□□□□□ -2.08
CLK1-214ENST00000496205 GINS2Q9Y248 185 aa2.07□□□□□ -2.08
CLK1-214ENST00000496205 COQ4Q9Y3A0 265 aa2.07□□□□□ -2.08
CLK1-214ENST00000496205 TIMM22Q9Y584 194 aa2.07□□□□□ -2.08
CLK1-214ENST00000496205 BRWD3Q6RI45 1802 aa2.06□□□□□ -2.08
CLK1-214ENST00000496205 ATAD5Q96QE3 1844 aa2.06□□□□□ -2.08
CLK1-214ENST00000496205 TRBV20OR9-2A0A075B6H5 130 aa2.06□□□□□ -2.08
CLK1-214ENST00000496205 TRBV19A0A075B6N1 114 aa2.06□□□□□ -2.08
CLK1-214ENST00000496205 IGSF23A1L1A6 192 aa2.06□□□□□ -2.08
CLK1-214ENST00000496205 C7orf66A4D0T2 115 aa2.06□□□□□ -2.08
CLK1-214ENST00000496205 GRIFINA4D1Z8 144 aa2.06□□□□□ -2.08
CLK1-214ENST00000496205 PRORSD1PA6NEY8 169 aa2.06□□□□□ -2.08
CLK1-214ENST00000496205 SIGLEC16A6NMB1 481 aa2.06□□□□□ -2.08
CLK1-214ENST00000496205 ZNF729A6NN14 1252 aaPredicted RBP2.06□□□□□ -2.08
CLK1-214ENST00000496205 A8MUN3 132 aa2.06□□□□□ -2.08
CLK1-214ENST00000496205 A8MUU9 505 aa2.06□□□□□ -2.08
CLK1-214ENST00000496205 E7EQ34 232 aa2.06□□□□□ -2.08
CLK1-214ENST00000496205 SH2D1AO60880 128 aa2.06□□□□□ -2.08
CLK1-214ENST00000496205 DHFRP00374 187 aa2.06□□□□□ -2.08
CLK1-214ENST00000496205 IFNA10P01566 189 aa2.06□□□□□ -2.08
CLK1-214ENST00000496205 IFNA7P01567 189 aa2.06□□□□□ -2.08
CLK1-214ENST00000496205 APOA2P02652 100 aa2.06□□□□□ -2.08
CLK1-214ENST00000496205 SRP19P09132 144 aaKnown RBP2.06□□□□□ -2.08
CLK1-214ENST00000496205 LGALS1P09382 135 aaKnown RBP2.06□□□□□ -2.08
CLK1-214ENST00000496205 ZNF705DP0CH99 300 aaPredicted RBP2.06□□□□□ -2.08
CLK1-214ENST00000496205 SMIM10L2AP0DMW4 78 aa2.06□□□□□ -2.08
CLK1-214ENST00000496205 SMIM10L2BP0DMW5 78 aa2.06□□□□□ -2.08
CLK1-214ENST00000496205 CGB3P0DN86 165 aa2.06□□□□□ -2.08
CLK1-214ENST00000496205 CGB7P0DN87 165 aa2.06□□□□□ -2.08
CLK1-214ENST00000496205 BLVRBP30043 206 aaPredicted RBP2.06□□□□□ -2.08
CLK1-214ENST00000496205 G6PCP35575 357 aa2.06□□□□□ -2.08
CLK1-214ENST00000496205 ZNF616Q08AN1 781 aa2.06□□□□□ -2.08
CLK1-214ENST00000496205 APOFQ13790 326 aa2.06□□□□□ -2.08
CLK1-214ENST00000496205 MRPL51Q4U2R6 128 aaKnown RBP2.06□□□□□ -2.08
CLK1-214ENST00000496205 C10orf91Q5T1B1 145 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms