RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 FABP9Q0Z7S8 132 aa9.11□□□□□ -0.95
CMSS1-208ENST00000496116 ADIPOQQ15848 244 aa9.11□□□□□ -0.95
CMSS1-208ENST00000496116 OR4A47Q6IF82 309 aa9.11□□□□□ -0.95
CMSS1-208ENST00000496116 C1orf229Q6ZS94 237 aaPredicted RBP9.11□□□□□ -0.95
CMSS1-208ENST00000496116 TCF23Q7RTU1 214 aa9.11□□□□□ -0.95
CMSS1-208ENST00000496116 IQCF2Q8IXL9 164 aa9.11□□□□□ -0.95
CMSS1-208ENST00000496116 C1orf87Q8N0U7 546 aa9.11□□□□□ -0.95
CMSS1-208ENST00000496116 RAB1CQ92928 201 aa9.11□□□□□ -0.95
CMSS1-208ENST00000496116 CTDSP1Q9GZU7 261 aa9.11□□□□□ -0.95
CMSS1-208ENST00000496116 GAL3ST2Q9H3Q3 398 aa9.11□□□□□ -0.95
CMSS1-208ENST00000496116 TMPRSS5Q9H3S3 457 aa9.11□□□□□ -0.95
CMSS1-208ENST00000496116 SH3BGRL2Q9UJC5 107 aa9.11□□□□□ -0.95
CMSS1-208ENST00000496116 FOXA2Q9Y261 457 aaPredicted RBP9.11□□□□□ -0.95
CMSS1-208ENST00000496116 LINC00312Q9Y6C7 94 aa9.11□□□□□ -0.95
CMSS1-208ENST00000496116 ICE1Q9Y2F5 2266 aa9.11□□□□□ -0.95
CMSS1-208ENST00000496116 ZFHX2Q9C0A1 2572 aaPredicted RBP9.11□□□□□ -0.95
CMSS1-208ENST00000496116 LAMA5O15230 3695 aa9.11□□□□□ -0.95
CMSS1-208ENST00000496116 A0A1W2PPV4 95 aa9.11□□□□□ -0.95
CMSS1-208ENST00000496116 PCP4L1A6NKN8 68 aa9.11□□□□□ -0.95
CMSS1-208ENST00000496116 RRHO14718 337 aa9.11□□□□□ -0.95
CMSS1-208ENST00000496116 KBTBD11O94819 623 aa9.11□□□□□ -0.95
CMSS1-208ENST00000496116 IGHV2-5P01817 119 aa9.11□□□□□ -0.95
CMSS1-208ENST00000496116 OPRK1P41145 380 aa9.11□□□□□ -0.95
CMSS1-208ENST00000496116 ERVFRD-1P60508 538 aa9.11□□□□□ -0.95
CMSS1-208ENST00000496116 HSPE1P61604 102 aaKnown RBP9.11□□□□□ -0.95
CMSS1-208ENST00000496116 RTL8BQ17RB0 113 aa9.11□□□□□ -0.95
CMSS1-208ENST00000496116 TMEM241Q24JQ0 296 aa9.11□□□□□ -0.95
CMSS1-208ENST00000496116 ZNF674Q2M3X9 581 aa9.11□□□□□ -0.95
CMSS1-208ENST00000496116 ZNF343Q6P1L6 599 aa9.11□□□□□ -0.95
CMSS1-208ENST00000496116 TREML4Q6UXN2 200 aa9.11□□□□□ -0.95
CMSS1-208ENST00000496116 CYP2G1PQ6ZSU1 146 aa9.11□□□□□ -0.95
CMSS1-208ENST00000496116 SLC25A48Q6ZT89 311 aaKnown RBP9.11□□□□□ -0.95
CMSS1-208ENST00000496116 ZNF383Q8NA42 475 aa9.11□□□□□ -0.95
CMSS1-208ENST00000496116 Q8NA96 180 aa9.11□□□□□ -0.95
CMSS1-208ENST00000496116 OR10A7Q8NGE5 316 aa9.11□□□□□ -0.95
CMSS1-208ENST00000496116 OR4F5Q8NH21 305 aa9.11□□□□□ -0.95
CMSS1-208ENST00000496116 OR4F4Q96R69 305 aa9.11□□□□□ -0.95
CMSS1-208ENST00000496116 TCEAL7Q9BRU2 100 aa9.11□□□□□ -0.95
CMSS1-208ENST00000496116 SAP30LQ9HAJ7 183 aa9.11□□□□□ -0.95
CMSS1-208ENST00000496116 KCNIP2Q9NS61 270 aa9.11□□□□□ -0.95
CMSS1-208ENST00000496116 TMEM14BQ9NUH8 114 aa9.11□□□□□ -0.95
CMSS1-208ENST00000496116 JKAMPQ9P055 326 aa9.11□□□□□ -0.95
CMSS1-208ENST00000496116 SLC25A10Q9UBX3 287 aaPredicted RBP9.11□□□□□ -0.95
CMSS1-208ENST00000496116 RPUSD1Q9UJJ7 312 aaKnown RBP9.11□□□□□ -0.95
CMSS1-208ENST00000496116 ZGRF1Q86YA3 2104 aa9.1□□□□□ -0.95
CMSS1-208ENST00000496116 RP1L1Q8IWN7 2480 aaPredicted RBP9.1□□□□□ -0.95
CMSS1-208ENST00000496116 SEC14L6B5MCN3 397 aa9.1□□□□□ -0.95
CMSS1-208ENST00000496116 AP4M1O00189 453 aa9.1□□□□□ -0.95
CMSS1-208ENST00000496116 S100A9P06702 114 aaKnown RBP9.1□□□□□ -0.95
CMSS1-208ENST00000496116 CXCL1P09341 107 aa9.1□□□□□ -0.95
CMSS1-208ENST00000496116 POU2AF1Q16633 256 aa9.1□□□□□ -0.95
CMSS1-208ENST00000496116 UTF1Q5T230 341 aa9.1□□□□□ -0.95
CMSS1-208ENST00000496116 ABHD12Q8N2K0 398 aa9.1□□□□□ -0.95
CMSS1-208ENST00000496116 Q8N7P7 452 aa9.1□□□□□ -0.95
CMSS1-208ENST00000496116 SLC24A4Q8NFF2 622 aa9.1□□□□□ -0.95
CMSS1-208ENST00000496116 NPVFQ9HCQ7 196 aa9.1□□□□□ -0.95
CMSS1-208ENST00000496116 NGBQ9NPG2 151 aa9.1□□□□□ -0.95
CMSS1-208ENST00000496116 ZNF835Q9Y2P0 537 aa9.1□□□□□ -0.95
CMSS1-208ENST00000496116 PRSS46E5RG02 174 aa9.1□□□□□ -0.95
CMSS1-208ENST00000496116 OPN1MWP04001 364 aa9.1□□□□□ -0.95
CMSS1-208ENST00000496116 OPN1MW2P0DN77 364 aa9.1□□□□□ -0.95
CMSS1-208ENST00000496116 OPN1MW3P0DN78 364 aa9.1□□□□□ -0.95
CMSS1-208ENST00000496116 NPY1RP25929 384 aa9.1□□□□□ -0.95
CMSS1-208ENST00000496116 RND2P52198 227 aa9.1□□□□□ -0.95
CMSS1-208ENST00000496116 RBPJQ06330 500 aa9.1□□□□□ -0.95
CMSS1-208ENST00000496116 MEF2CQ06413 473 aaPredicted RBP9.1□□□□□ -0.95
CMSS1-208ENST00000496116 TMEM249Q2WGJ8 235 aa9.1□□□□□ -0.95
CMSS1-208ENST00000496116 SPACA3Q8IXA5 215 aa9.1□□□□□ -0.95
CMSS1-208ENST00000496116 OR13D1Q8NGV5 346 aa9.1□□□□□ -0.95
CMSS1-208ENST00000496116 RPUSD4Q96CM3 377 aaKnown RBP9.1□□□□□ -0.95
CMSS1-208ENST00000496116 PRNDQ9UKY0 176 aa9.1□□□□□ -0.95
CMSS1-208ENST00000496116 TET2Q6N021 2002 aaPredicted RBP9.09□□□□□ -0.95
CMSS1-208ENST00000496116 PPIAL4EA0A075B759 164 aa9.09□□□□□ -0.95
CMSS1-208ENST00000496116 TGIF2-C20orf24A0A0A6YYL0 155 aa9.09□□□□□ -0.95
CMSS1-208ENST00000496116 PPIAL4DF5H284 164 aa9.09□□□□□ -0.95
CMSS1-208ENST00000496116 TGOLN2O43493 480 aa9.09□□□□□ -0.95
CMSS1-208ENST00000496116 PAGE4O60829 102 aa9.09□□□□□ -0.95
CMSS1-208ENST00000496116 THBDP07204 575 aa9.09□□□□□ -0.95
CMSS1-208ENST00000496116 PPIAL4FP0DN26 164 aa9.09□□□□□ -0.95
CMSS1-208ENST00000496116 RPL31P62899 125 aaKnown RBP9.09□□□□□ -0.95
CMSS1-208ENST00000496116 FOXC1Q12948 553 aa9.09□□□□□ -0.95
CMSS1-208ENST00000496116 KIAA0141Q14154 515 aaPredicted RBP9.09□□□□□ -0.95
CMSS1-208ENST00000496116 ADIRFQ15847 76 aa9.09□□□□□ -0.95
CMSS1-208ENST00000496116 TGIF2LYQ8IUE0 185 aa9.09□□□□□ -0.95
CMSS1-208ENST00000496116 PARLQ9H300 379 aa9.09□□□□□ -0.95
CMSS1-208ENST00000496116 MS4A5Q9H3V2 200 aa9.09□□□□□ -0.95
CMSS1-208ENST00000496116 SLC35D1Q9NTN3 355 aa9.09□□□□□ -0.95
CMSS1-208ENST00000496116 DCAF16Q9NXF7 216 aa9.09□□□□□ -0.95
CMSS1-208ENST00000496116 PPIAL4AQ9Y536 164 aa9.09□□□□□ -0.95
CMSS1-208ENST00000496116 MMP23AO75900 390 aa9.08□□□□□ -0.96
CMSS1-208ENST00000496116 SMIM6P0DI80 62 aa9.08□□□□□ -0.96
CMSS1-208ENST00000496116 RAB31Q13636 194 aa9.08□□□□□ -0.96
CMSS1-208ENST00000496116 TBR1Q16650 682 aa9.08□□□□□ -0.96
CMSS1-208ENST00000496116 ZCCHC14Q8WYQ9 949 aaKnown RBP9.08□□□□□ -0.96
CMSS1-208ENST00000496116 NEIL1Q96FI4 390 aaPredicted RBP9.08□□□□□ -0.96
CMSS1-208ENST00000496116 ZNF257Q9Y2Q1 563 aa9.08□□□□□ -0.96
CMSS1-208ENST00000496116 OR51B2Q9Y5P1 312 aa9.08□□□□□ -0.96
CMSS1-208ENST00000496116 MGAQ8IWI9 3026 aa9.08□□□□□ -0.96
CMSS1-208ENST00000496116 YLPM1P49750 1951 aaKnown RBP9.08□□□□□ -0.96
CMSS1-208ENST00000496116 AKAP13Q12802 2813 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms