RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 PMS2P5A8MQ11 134 aa3.21□□□□□ -1.9
VPS52-222ENST00000495981 SERPINE3A8MV23 424 aa3.21□□□□□ -1.9
VPS52-222ENST00000495981 C15orf65H3BRN8 121 aa3.21□□□□□ -1.9
VPS52-222ENST00000495981 J3QRE1 110 aa3.21□□□□□ -1.9
VPS52-222ENST00000495981 BMPR1BO00238 502 aa3.21□□□□□ -1.9
VPS52-222ENST00000495981 CCRL2O00421 344 aa3.21□□□□□ -1.9
VPS52-222ENST00000495981 GABRPO00591 440 aa3.21□□□□□ -1.9
VPS52-222ENST00000495981 RAMP3O60896 148 aa3.21□□□□□ -1.9
VPS52-222ENST00000495981 CIB2O75838 187 aa3.21□□□□□ -1.9
VPS52-222ENST00000495981 SULT1C4O75897 302 aa3.21□□□□□ -1.9
VPS52-222ENST00000495981 RPP14O95059 124 aaKnown RBP3.21□□□□□ -1.9
VPS52-222ENST00000495981 CYB5AP00167 134 aa3.21□□□□□ -1.9
VPS52-222ENST00000495981 IGKV1D-33P01593 117 aa3.21□□□□□ -1.9
VPS52-222ENST00000495981 IGKV1-33P01594 117 aa3.21□□□□□ -1.9
VPS52-222ENST00000495981 ISG15P05161 165 aa3.21□□□□□ -1.9
VPS52-222ENST00000495981 HCKP08631 526 aa3.21□□□□□ -1.9
VPS52-222ENST00000495981 ANXA8P13928 327 aa3.21□□□□□ -1.9
VPS52-222ENST00000495981 HOXB6P17509 224 aaKnown RBP3.21□□□□□ -1.9
VPS52-222ENST00000495981 ATF1P18846 271 aa3.21□□□□□ -1.9
VPS52-222ENST00000495981 PRKACBP22694 351 aa3.21□□□□□ -1.9
VPS52-222ENST00000495981 P2RY1P47900 373 aa3.21□□□□□ -1.9
VPS52-222ENST00000495981 GNG10P50151 68 aa3.21□□□□□ -1.9
VPS52-222ENST00000495981 RAB7AP51149 207 aa3.21□□□□□ -1.9
VPS52-222ENST00000495981 ARHGDIBP52566 201 aa3.21□□□□□ -1.9
VPS52-222ENST00000495981 ZNF137PP52743 207 aa3.21□□□□□ -1.9
VPS52-222ENST00000495981 GNGT1P63211 74 aa3.21□□□□□ -1.9
VPS52-222ENST00000495981 S100A12P80511 92 aa3.21□□□□□ -1.9
VPS52-222ENST00000495981 NDPQ00604 133 aa3.21□□□□□ -1.9
VPS52-222ENST00000495981 DHODHQ02127 395 aa3.21□□□□□ -1.9
VPS52-222ENST00000495981 ZNF816Q0VGE8 651 aaPredicted RBP3.21□□□□□ -1.9
VPS52-222ENST00000495981 MADCAM1Q13477 382 aa3.21□□□□□ -1.9
VPS52-222ENST00000495981 EBI3Q14213 229 aa3.21□□□□□ -1.9
VPS52-222ENST00000495981 ZNF585BQ52M93 769 aa3.21□□□□□ -1.9
VPS52-222ENST00000495981 TP53I3Q53FA7 332 aa3.21□□□□□ -1.9
VPS52-222ENST00000495981 KDM4DQ6B0I6 523 aa3.21□□□□□ -1.9
VPS52-222ENST00000495981 OR52W1Q6IF63 320 aa3.21□□□□□ -1.9
VPS52-222ENST00000495981 PRSS48Q7RTY5 328 aa3.21□□□□□ -1.9
VPS52-222ENST00000495981 SLC35E3Q7Z769 313 aa3.21□□□□□ -1.9
VPS52-222ENST00000495981 TMEM17Q86X19 198 aa3.21□□□□□ -1.9
VPS52-222ENST00000495981 TGIF2LXQ8IUE1 241 aa3.21□□□□□ -1.9
VPS52-222ENST00000495981 SAXO1Q8IYX7 474 aa3.21□□□□□ -1.9
VPS52-222ENST00000495981 RDH10Q8IZV5 341 aa3.21□□□□□ -1.9
VPS52-222ENST00000495981 COMMD1Q8N668 190 aa3.21□□□□□ -1.9
VPS52-222ENST00000495981 YIPF7Q8N8F6 280 aa3.21□□□□□ -1.9
VPS52-222ENST00000495981 CHST4Q8NCG5 386 aa3.21□□□□□ -1.9
VPS52-222ENST00000495981 ZNF439Q8NDP4 499 aa3.21□□□□□ -1.9
VPS52-222ENST00000495981 CCDC54Q8NEL0 328 aa3.21□□□□□ -1.9
VPS52-222ENST00000495981 OR10H4Q8NGA5 316 aa3.21□□□□□ -1.9
VPS52-222ENST00000495981 OR13C9Q8NGT0 318 aa3.21□□□□□ -1.9
VPS52-222ENST00000495981 OR2G2Q8NGZ5 317 aa3.21□□□□□ -1.9
VPS52-222ENST00000495981 OR8U1Q8NH10 309 aa3.21□□□□□ -1.9
VPS52-222ENST00000495981 PLPPR1Q8TBJ4 325 aa3.21□□□□□ -1.9
VPS52-222ENST00000495981 ENKURQ8TC29 256 aa3.21□□□□□ -1.9
VPS52-222ENST00000495981 CAPSLQ8WWF8 208 aa3.21□□□□□ -1.9
VPS52-222ENST00000495981 TMEM190Q8WZ59 177 aa3.21□□□□□ -1.9
VPS52-222ENST00000495981 RGP1Q92546 391 aaPredicted RBP3.21□□□□□ -1.9
VPS52-222ENST00000495981 RPEQ96AT9 228 aa3.21□□□□□ -1.9
VPS52-222ENST00000495981 CREB3L1Q96BA8 519 aa3.21□□□□□ -1.9
VPS52-222ENST00000495981 RAB3CQ96E17 227 aa3.21□□□□□ -1.9
VPS52-222ENST00000495981 CIB1Q99828 191 aa3.21□□□□□ -1.9
VPS52-222ENST00000495981 CHRDL1Q9BU40 450 aa3.21□□□□□ -1.9
VPS52-222ENST00000495981 PRRG3Q9BZD7 231 aa3.21□□□□□ -1.9
VPS52-222ENST00000495981 ABCG5Q9H222 651 aa3.21□□□□□ -1.9
VPS52-222ENST00000495981 PLSCR3Q9NRY6 295 aa3.21□□□□□ -1.9
VPS52-222ENST00000495981 KIF25Q9UIL4 384 aa3.21□□□□□ -1.9
VPS52-222ENST00000495981 PSG11Q9UQ72 335 aa3.21□□□□□ -1.9
VPS52-222ENST00000495981 EXOGQ9Y2C4 368 aaKnown RBP3.21□□□□□ -1.9
VPS52-222ENST00000495981 AMMECR1Q9Y4X0 333 aaPredicted RBP3.21□□□□□ -1.9
VPS52-222ENST00000495981 IGHV3-72A0A0B4J1Y9 119 aa3.2□□□□□ -1.9
VPS52-222ENST00000495981 TRAV39A0A0B4J263 110 aa3.2□□□□□ -1.9
VPS52-222ENST00000495981 IGHV1-3A0A0C4DH29 117 aa3.2□□□□□ -1.9
VPS52-222ENST00000495981 ZNF736B4DX44 427 aaPredicted RBP3.2□□□□□ -1.9
VPS52-222ENST00000495981 SEC14L6B5MCN3 397 aa3.2□□□□□ -1.9
VPS52-222ENST00000495981 H0YJX3 145 aa3.2□□□□□ -1.9
VPS52-222ENST00000495981 I3L521 148 aa3.2□□□□□ -1.9
VPS52-222ENST00000495981 SLC31A2O15432 143 aa3.2□□□□□ -1.9
VPS52-222ENST00000495981 CA1P00915 261 aaPredicted RBP3.2□□□□□ -1.9
VPS52-222ENST00000495981 IGHV3-7P01780 117 aa3.2□□□□□ -1.9
VPS52-222ENST00000495981 OR9G9P0C7N8 305 aa3.2□□□□□ -1.9
VPS52-222ENST00000495981 NFYBP25208 207 aa3.2□□□□□ -1.9
VPS52-222ENST00000495981 POLR2IP36954 125 aaKnown RBP3.2□□□□□ -1.9
VPS52-222ENST00000495981 REG1BP48304 166 aa3.2□□□□□ -1.9
VPS52-222ENST00000495981 HSPA13P48723 471 aa3.2□□□□□ -1.9
VPS52-222ENST00000495981 RAB25P57735 213 aa3.2□□□□□ -1.9
VPS52-222ENST00000495981 POLR2GP62487 172 aaKnown RBP eCLIP3.2□□□□□ -1.9
VPS52-222ENST00000495981 GNB1P62873 340 aa3.2□□□□□ -1.9
VPS52-222ENST00000495981 RUNX1Q01196 453 aa3.2□□□□□ -1.9
VPS52-222ENST00000495981 KIAA0141Q14154 515 aaPredicted RBP3.2□□□□□ -1.9
VPS52-222ENST00000495981 FLOT2Q14254 428 aa3.2□□□□□ -1.9
VPS52-222ENST00000495981 KIR2DS1Q14954 304 aa3.2□□□□□ -1.9
VPS52-222ENST00000495981 ATP6AP1Q15904 470 aa3.2□□□□□ -1.9
VPS52-222ENST00000495981 PIGYQ3MUY2 71 aa3.2□□□□□ -1.9
VPS52-222ENST00000495981 Q3ZCU0 254 aa3.2□□□□□ -1.9
VPS52-222ENST00000495981 NHLRC3Q5JS37 347 aa3.2□□□□□ -1.9
VPS52-222ENST00000495981 ADAMTSL4-AS1Q5T5F5 129 aa3.2□□□□□ -1.9
VPS52-222ENST00000495981 LINC00242Q5T6M2 205 aa3.2□□□□□ -1.9
VPS52-222ENST00000495981 C9orf66Q5T8R8 295 aa3.2□□□□□ -1.9
VPS52-222ENST00000495981 LPCAT4Q643R3 524 aa3.2□□□□□ -1.9
VPS52-222ENST00000495981 ELP2Q6IA86 826 aa3.2□□□□□ -1.9
VPS52-222ENST00000495981 KCNIP4Q6PIL6 250 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms