RNA–Protein interactions for RNA: ENST00000495817.1

CCDC39-207, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 1,047 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-207ENST00000495817 SMIM12Q96EX1 92 aa2.89□□□□□ -1.95
CCDC39-207ENST00000495817 PKMYT1Q99640 499 aa2.89□□□□□ -1.95
CCDC39-207ENST00000495817 TMEM109Q9BVC6 243 aa2.89□□□□□ -1.95
CCDC39-207ENST00000495817 ARL6Q9H0F7 186 aa2.89□□□□□ -1.95
CCDC39-207ENST00000495817 BATF3Q9NR55 127 aa2.89□□□□□ -1.95
CCDC39-207ENST00000495817 CMTM6Q9NX76 183 aa2.89□□□□□ -1.95
CCDC39-207ENST00000495817 BABAM2Q9NXR7 383 aa2.89□□□□□ -1.95
CCDC39-207ENST00000495817 OR5V1Q9UGF6 321 aa2.89□□□□□ -1.95
CCDC39-207ENST00000495817 RPUSD1Q9UJJ7 312 aaKnown RBP2.89□□□□□ -1.95
CCDC39-207ENST00000495817 U3KQK5 164 aa2.89□□□□□ -1.95
CCDC39-207ENST00000495817 LAMB4A4D0S4 1761 aa2.89□□□□□ -1.95
CCDC39-207ENST00000495817 CASP8AP2Q9UKL3 1982 aa2.89□□□□□ -1.95
CCDC39-207ENST00000495817 ZSWIM8A7E2V4 1837 aa2.89□□□□□ -1.95
CCDC39-207ENST00000495817 SPTBN5Q9NRC6 3674 aaKnown RBP2.88□□□□□ -1.95
CCDC39-207ENST00000495817 LRRC37AA6NMS7 1700 aa2.88□□□□□ -1.95
CCDC39-207ENST00000495817 IGKV1D-37A0A075B6S9 117 aa2.88□□□□□ -1.95
CCDC39-207ENST00000495817 IGKV3D-11A0A0A0MRZ8 115 aa2.88□□□□□ -1.95
CCDC39-207ENST00000495817 A0A1B0GU33 70 aa2.88□□□□□ -1.95
CCDC39-207ENST00000495817 C21orf140B9A014 251 aa2.88□□□□□ -1.95
CCDC39-207ENST00000495817 F5H5T6 163 aa2.88□□□□□ -1.95
CCDC39-207ENST00000495817 ACOX3O15254 700 aa2.88□□□□□ -1.95
CCDC39-207ENST00000495817 SLC16A4O15374 487 aa2.88□□□□□ -1.95
CCDC39-207ENST00000495817 NDUFA2O43678 99 aa2.88□□□□□ -1.95
CCDC39-207ENST00000495817 SH2D1AO60880 128 aa2.88□□□□□ -1.95
CCDC39-207ENST00000495817 CALB1P05937 261 aa2.88□□□□□ -1.95
CCDC39-207ENST00000495817 IGKV4-1P06312 121 aa2.88□□□□□ -1.95
CCDC39-207ENST00000495817 F8A1P23610 371 aa2.88□□□□□ -1.95
CCDC39-207ENST00000495817 OMPP47874 163 aa2.88□□□□□ -1.95
CCDC39-207ENST00000495817 DYNLL1P63167 89 aaKnown RBP2.88□□□□□ -1.95
CCDC39-207ENST00000495817 SRSF6Q13247 344 aaKnown RBP2.88□□□□□ -1.95
CCDC39-207ENST00000495817 PYDC2Q56P42 97 aa2.88□□□□□ -1.95
CCDC39-207ENST00000495817 SDHAF4Q5VUM1 108 aa2.88□□□□□ -1.95
CCDC39-207ENST00000495817 DNM1P34Q6PK57 102 aa2.88□□□□□ -1.95
CCDC39-207ENST00000495817 DRAM2Q6UX65 266 aa2.88□□□□□ -1.95
CCDC39-207ENST00000495817 LRRN1Q6UXK5 716 aa2.88□□□□□ -1.95
CCDC39-207ENST00000495817 SPNS3Q6ZMD2 512 aa2.88□□□□□ -1.95
CCDC39-207ENST00000495817 LYG2Q86SG7 212 aa2.88□□□□□ -1.95
CCDC39-207ENST00000495817 TRAPPC5Q8IUR0 188 aa2.88□□□□□ -1.95
CCDC39-207ENST00000495817 PIGXQ8TBF5 258 aa2.88□□□□□ -1.95
CCDC39-207ENST00000495817 TAMM41Q96BW9 452 aa2.88□□□□□ -1.95
CCDC39-207ENST00000495817 SLC25A44Q96H78 314 aaPredicted RBP2.88□□□□□ -1.95
CCDC39-207ENST00000495817 EBNA1BP2Q99848 306 aaKnown RBP2.88□□□□□ -1.95
CCDC39-207ENST00000495817 UBQLN4Q9NRR5 601 aa2.88□□□□□ -1.95
CCDC39-207ENST00000495817 TMEM216Q9P0N5 145 aa2.88□□□□□ -1.95
CCDC39-207ENST00000495817 ZNF337Q9Y3M9 751 aa2.88□□□□□ -1.95
CCDC39-207ENST00000495817 LINC00588Q9Y4M8 146 aa2.88□□□□□ -1.95
CCDC39-207ENST00000495817 PHLDA3Q9Y5J5 127 aa2.88□□□□□ -1.95
CCDC39-207ENST00000495817 TRPM7Q96QT4 1865 aa2.88□□□□□ -1.95
CCDC39-207ENST00000495817 EYSQ5T1H1 3165 aa2.88□□□□□ -1.95
CCDC39-207ENST00000495817 VCANP13611 3396 aa2.87□□□□□ -1.95
CCDC39-207ENST00000495817 M0R036 132 aa2.87□□□□□ -1.95
CCDC39-207ENST00000495817 PSCAO43653 123 aa2.87□□□□□ -1.95
CCDC39-207ENST00000495817 HPGDSO60760 199 aa2.87□□□□□ -1.95
CCDC39-207ENST00000495817 CCDC153Q494R4 210 aa2.87□□□□□ -1.95
CCDC39-207ENST00000495817 CENPWQ5EE01 88 aa2.87□□□□□ -1.95
CCDC39-207ENST00000495817 C10orf91Q5T1B1 145 aa2.87□□□□□ -1.95
CCDC39-207ENST00000495817 HES3Q5TGS1 186 aa2.87□□□□□ -1.95
CCDC39-207ENST00000495817 TCF23Q7RTU1 214 aa2.87□□□□□ -1.95
CCDC39-207ENST00000495817 ZBTB8OSQ8IWT0 167 aa2.87□□□□□ -1.95
CCDC39-207ENST00000495817 BLIDQ8IZY5 108 aa2.87□□□□□ -1.95
CCDC39-207ENST00000495817 Q8NAQ8 132 aa2.87□□□□□ -1.95
CCDC39-207ENST00000495817 LY6G5BQ8NDX9 201 aa2.87□□□□□ -1.95
CCDC39-207ENST00000495817 PXT1Q8NFP0 134 aa2.87□□□□□ -1.95
CCDC39-207ENST00000495817 STOML3Q8TAV4 291 aa2.87□□□□□ -1.95
CCDC39-207ENST00000495817 DYDC1Q8WWB3 177 aa2.87□□□□□ -1.95
CCDC39-207ENST00000495817 IGF2BP2-AS1Q96M15 143 aa2.87□□□□□ -1.95
CCDC39-207ENST00000495817 PARVBQ9HBI1 364 aa2.87□□□□□ -1.95
CCDC39-207ENST00000495817 KCNIP2Q9NS61 270 aa2.87□□□□□ -1.95
CCDC39-207ENST00000495817 MCTS1Q9ULC4 181 aaKnown RBP2.87□□□□□ -1.95
CCDC39-207ENST00000495817 UNC80Q8N2C7 3258 aa2.87□□□□□ -1.95
CCDC39-207ENST00000495817 LAMB2P55268 1798 aa2.87□□□□□ -1.95
CCDC39-207ENST00000495817 RTL9Q8NET4 1388 aa2.87□□□□□ -1.95
CCDC39-207ENST00000495817 H3BSA7 217 aa2.86□□□□□ -1.95
CCDC39-207ENST00000495817 M0QYV0 167 aa2.86□□□□□ -1.95
CCDC39-207ENST00000495817 BIRC5O15392 142 aa2.86□□□□□ -1.95
CCDC39-207ENST00000495817 FADS1O60427 444 aa2.86□□□□□ -1.95
CCDC39-207ENST00000495817 CNIH1O95406 144 aa2.86□□□□□ -1.95
CCDC39-207ENST00000495817 ATP6V1G2O95670 118 aa2.86□□□□□ -1.95
CCDC39-207ENST00000495817 FBP1P09467 338 aa2.86□□□□□ -1.95
CCDC39-207ENST00000495817 S100A1P23297 94 aa2.86□□□□□ -1.95
CCDC39-207ENST00000495817 GADD45AP24522 165 aa2.86□□□□□ -1.95
CCDC39-207ENST00000495817 AP2S1P53680 142 aaPredicted RBP2.86□□□□□ -1.95
CCDC39-207ENST00000495817 TMEM33P57088 247 aa2.86□□□□□ -1.95
CCDC39-207ENST00000495817 OR4D2P58180 307 aa2.86□□□□□ -1.95
CCDC39-207ENST00000495817 CLVS1Q8IUQ0 354 aaPredicted RBP2.86□□□□□ -1.95
CCDC39-207ENST00000495817 OR1M1Q8NGA1 313 aa2.86□□□□□ -1.95
CCDC39-207ENST00000495817 OR11G2Q8NGC1 345 aa2.86□□□□□ -1.95
CCDC39-207ENST00000495817 OR2D3Q8NGH3 330 aa2.86□□□□□ -1.95
CCDC39-207ENST00000495817 OR10J5Q8NHC4 309 aa2.86□□□□□ -1.95
CCDC39-207ENST00000495817 TLCD1Q96CP7 247 aa2.86□□□□□ -1.95
CCDC39-207ENST00000495817 RMND5BQ96G75 393 aaPredicted RBP2.86□□□□□ -1.95
CCDC39-207ENST00000495817 RBP7Q96R05 134 aa2.86□□□□□ -1.95
CCDC39-207ENST00000495817 STACQ99469 402 aa2.86□□□□□ -1.95
CCDC39-207ENST00000495817 GPR22Q99680 433 aa2.86□□□□□ -1.95
CCDC39-207ENST00000495817 PCBD2Q9H0N5 130 aa2.86□□□□□ -1.95
CCDC39-207ENST00000495817 ZNF286AQ9HBT8 521 aa2.86□□□□□ -1.95
CCDC39-207ENST00000495817 FGFR1OP2Q9NVK5 253 aa2.86□□□□□ -1.95
CCDC39-207ENST00000495817 SMPXQ9UHP9 88 aa2.86□□□□□ -1.95
CCDC39-207ENST00000495817 ZNF230Q9UIE0 474 aaPredicted RBP2.86□□□□□ -1.95
CCDC39-207ENST00000495817 NDUFAF1Q9Y375 327 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms