RNA–Protein interactions for RNA: ENST00000495755.1

VPS52-221, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-221ENST00000495755 BMPR1BO00238 502 aa5.5□□□□□ -1.53
VPS52-221ENST00000495755 MPPED1O15442 326 aa5.5□□□□□ -1.53
VPS52-221ENST00000495755 RBFOX2O43251 390 aaKnown RBP eCLIP5.5□□□□□ -1.53
VPS52-221ENST00000495755 TNFSF12O43508 249 aa5.5□□□□□ -1.53
VPS52-221ENST00000495755 TNFAIP8O95379 198 aa5.5□□□□□ -1.53
VPS52-221ENST00000495755 HRASP01112 189 aa5.5□□□□□ -1.53
VPS52-221ENST00000495755 FCER2P06734 321 aa5.5□□□□□ -1.53
VPS52-221ENST00000495755 CRYGCP07315 174 aa5.5□□□□□ -1.53
VPS52-221ENST00000495755 CSN3P07498 182 aa5.5□□□□□ -1.53
VPS52-221ENST00000495755 FRMD6-AS1P0C7T7 363 aa5.5□□□□□ -1.53
VPS52-221ENST00000495755 ZNF735P0CB33 412 aa5.5□□□□□ -1.53
VPS52-221ENST00000495755 MAS1LP35410 378 aa5.5□□□□□ -1.53
VPS52-221ENST00000495755 KIR2DS2P43631 304 aa5.5□□□□□ -1.53
VPS52-221ENST00000495755 MECP2P51608 486 aaKnown RBP5.5□□□□□ -1.53
VPS52-221ENST00000495755 SYNJ2BPP57105 145 aa5.5□□□□□ -1.53
VPS52-221ENST00000495755 LSM3P62310 102 aaKnown RBP5.5□□□□□ -1.53
VPS52-221ENST00000495755 ATP5G2Q06055 141 aa5.5□□□□□ -1.53
VPS52-221ENST00000495755 KLK9Q2XQG4 91 aa5.5□□□□□ -1.53
VPS52-221ENST00000495755 UBE2NLQ5JXB2 153 aa5.5□□□□□ -1.53
VPS52-221ENST00000495755 DHRS11Q6UWP2 260 aa5.5□□□□□ -1.53
VPS52-221ENST00000495755 SLC25A42Q86VD7 318 aa5.5□□□□□ -1.53
VPS52-221ENST00000495755 ANKRD13BQ86YJ7 626 aa5.5□□□□□ -1.53
VPS52-221ENST00000495755 SBSPONQ8IVN8 264 aa5.5□□□□□ -1.53
VPS52-221ENST00000495755 SPAG16Q8N0X2 631 aa5.5□□□□□ -1.53
VPS52-221ENST00000495755 NECAP1Q8NC96 275 aa5.5□□□□□ -1.53
VPS52-221ENST00000495755 SECTM1Q8WVN6 248 aa5.5□□□□□ -1.53
VPS52-221ENST00000495755 RSRP1Q9BUV0 290 aa5.5□□□□□ -1.53
VPS52-221ENST00000495755 SLC5A7Q9GZV3 580 aa5.5□□□□□ -1.53
VPS52-221ENST00000495755 SLC2A9Q9NRM0 540 aa5.5□□□□□ -1.53
VPS52-221ENST00000495755 KLK9Q9UKQ9 250 aa5.5□□□□□ -1.53
VPS52-221ENST00000495755 ZNF257Q9Y2Q1 563 aa5.5□□□□□ -1.53
VPS52-221ENST00000495755 DMRT1Q9Y5R6 373 aa5.5□□□□□ -1.53
VPS52-221ENST00000495755 MEIS3P1A6NDR6 274 aa5.49□□□□□ -1.53
VPS52-221ENST00000495755 CGB1A6NKQ9 187 aa5.49□□□□□ -1.53
VPS52-221ENST00000495755 NPIPB5A8MRT5 1133 aa5.49□□□□□ -1.53
VPS52-221ENST00000495755 A8MZ25 164 aa5.49□□□□□ -1.53
VPS52-221ENST00000495755 SULT1C2O00338 296 aa5.49□□□□□ -1.53
VPS52-221ENST00000495755 OR2J3O76001 311 aa5.49□□□□□ -1.53
VPS52-221ENST00000495755 AREGP15514 252 aa5.49□□□□□ -1.53
VPS52-221ENST00000495755 HLA-GP17693 338 aa5.49□□□□□ -1.53
VPS52-221ENST00000495755 NAT1P18440 290 aa5.49□□□□□ -1.53
VPS52-221ENST00000495755 GNRHRP30968 328 aa5.49□□□□□ -1.53
VPS52-221ENST00000495755 RPL27AP46776 148 aaKnown RBP5.49□□□□□ -1.53
VPS52-221ENST00000495755 TAS2R31P59538 309 aa5.49□□□□□ -1.53
VPS52-221ENST00000495755 TAS2R20P59543 309 aa5.49□□□□□ -1.53
VPS52-221ENST00000495755 EXOSC2Q13868 293 aaKnown RBP5.49□□□□□ -1.53
VPS52-221ENST00000495755 POU2AF1Q16633 256 aa5.49□□□□□ -1.53
VPS52-221ENST00000495755 TATDN3Q17R31 274 aa5.49□□□□□ -1.53
VPS52-221ENST00000495755 RPEL1Q2QD12 228 aa5.49□□□□□ -1.53
VPS52-221ENST00000495755 OR4A47Q6IF82 309 aa5.49□□□□□ -1.53
VPS52-221ENST00000495755 ZNF818PQ6ZRF7 136 aa5.49□□□□□ -1.53
VPS52-221ENST00000495755 C19orf35Q6ZS72 473 aa5.49□□□□□ -1.53
VPS52-221ENST00000495755 LYSMD2Q8IV50 215 aa5.49□□□□□ -1.53
VPS52-221ENST00000495755 SAMD12Q8N8I0 201 aa5.49□□□□□ -1.53
VPS52-221ENST00000495755 OR4A5Q8NH83 315 aa5.49□□□□□ -1.53
VPS52-221ENST00000495755 SLC25A46Q96AG3 418 aa5.49□□□□□ -1.53
VPS52-221ENST00000495755 KCTD12Q96CX2 325 aaKnown RBP5.49□□□□□ -1.53
VPS52-221ENST00000495755 FANCD2OSQ96PS1 177 aa5.49□□□□□ -1.53
VPS52-221ENST00000495755 FYTTD1Q96QD9 318 aaKnown RBP5.49□□□□□ -1.53
VPS52-221ENST00000495755 AIFM2Q9BRQ8 373 aa5.49□□□□□ -1.53
VPS52-221ENST00000495755 THAP7Q9BT49 309 aaPredicted RBP5.49□□□□□ -1.53
VPS52-221ENST00000495755 FUNDC2Q9BWH2 189 aa5.49□□□□□ -1.53
VPS52-221ENST00000495755 VCX3AQ9NNX9 186 aa5.49□□□□□ -1.53
VPS52-221ENST00000495755 C19orf73Q9NVV2 129 aa5.49□□□□□ -1.53
VPS52-221ENST00000495755 BET1LQ9NYM9 111 aa5.49□□□□□ -1.53
VPS52-221ENST00000495755 PLECQ15149 4684 aaKnown RBP5.49□□□□□ -1.53
VPS52-221ENST00000495755 H0Y980 276 aa5.48□□□□□ -1.53
VPS52-221ENST00000495755 UPK2O00526 184 aa5.48□□□□□ -1.53
VPS52-221ENST00000495755 PGLYRP1O75594 196 aaPredicted RBP5.48□□□□□ -1.53
VPS52-221ENST00000495755 NDUFB8O95169 186 aa5.48□□□□□ -1.53
VPS52-221ENST00000495755 HPRT1P00492 218 aa5.48□□□□□ -1.53
VPS52-221ENST00000495755 IGHV4-30-4P0DP06 118 aa5.48□□□□□ -1.53
VPS52-221ENST00000495755 MYOD1P15172 320 aa5.48□□□□□ -1.53
VPS52-221ENST00000495755 CTRB1P17538 263 aa5.48□□□□□ -1.53
VPS52-221ENST00000495755 PSMB6P28072 239 aa5.48□□□□□ -1.53
VPS52-221ENST00000495755 PRSS3P35030 304 aa5.48□□□□□ -1.53
VPS52-221ENST00000495755 RFX2P48378 723 aa5.48□□□□□ -1.53
VPS52-221ENST00000495755 FXYD4P59646 89 aa5.48□□□□□ -1.53
VPS52-221ENST00000495755 OR2B8PP59922 312 aa5.48□□□□□ -1.53
VPS52-221ENST00000495755 RPL8P62917 257 aaKnown RBP5.48□□□□□ -1.53
VPS52-221ENST00000495755 CATR1Q13166 79 aa5.48□□□□□ -1.53
VPS52-221ENST00000495755 C15orf32Q32M92 178 aa5.48□□□□□ -1.53
VPS52-221ENST00000495755 FAM209BQ5JX69 171 aa5.48□□□□□ -1.53
VPS52-221ENST00000495755 TMEM69Q5SWH9 247 aa5.48□□□□□ -1.53
VPS52-221ENST00000495755 CTRB2Q6GPI1 263 aa5.48□□□□□ -1.53
VPS52-221ENST00000495755 ADAMTSL5Q6ZMM2 481 aa5.48□□□□□ -1.53
VPS52-221ENST00000495755 SSX9Q7RTT3 188 aa5.48□□□□□ -1.53
VPS52-221ENST00000495755 TMEM17Q86X19 198 aa5.48□□□□□ -1.53
VPS52-221ENST00000495755 MOB3AQ96BX8 217 aa5.48□□□□□ -1.53
VPS52-221ENST00000495755 CMTM3Q96MX0 182 aa5.48□□□□□ -1.53
VPS52-221ENST00000495755 PLEKHA2Q9HB19 425 aa5.48□□□□□ -1.53
VPS52-221ENST00000495755 IFT46Q9NQC8 304 aa5.48□□□□□ -1.53
VPS52-221ENST00000495755 EHFQ9NZC4 300 aa5.48□□□□□ -1.53
VPS52-221ENST00000495755 FBXL7Q9UJT9 491 aa5.48□□□□□ -1.53
VPS52-221ENST00000495755 STARD9Q9P2P6 4700 aa5.47□□□□□ -1.53
VPS52-221ENST00000495755 TENM2Q9NT68 2774 aa5.47□□□□□ -1.53
VPS52-221ENST00000495755 IGLV11-55A0A075B6I3 123 aa5.47□□□□□ -1.53
VPS52-221ENST00000495755 TRAV3A0A0B4J244 114 aa5.47□□□□□ -1.53
VPS52-221ENST00000495755 IGLC7A0M8Q6 106 aa5.47□□□□□ -1.53
VPS52-221ENST00000495755 DPPA5A6NC42 116 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms