RNA–Protein interactions for RNA: ENST00000495693.1

EPHA4-213, Transcript of EPH receptor A4, humanhuman

TSL 3

Gene EPHA4, Length 588 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-213ENST00000495693 SFT2D1Q8WV19 159 aa7.07□□□□□ -1.28
EPHA4-213ENST00000495693 CCL17Q92583 94 aa7.07□□□□□ -1.28
EPHA4-213ENST00000495693 C5orf30Q96GV9 206 aa7.07□□□□□ -1.28
EPHA4-213ENST00000495693 TIMD4Q96H15 378 aa7.07□□□□□ -1.28
EPHA4-213ENST00000495693 TXNDC17Q9BRA2 123 aa7.07□□□□□ -1.28
EPHA4-213ENST00000495693 ACTR3CQ9C0K3 210 aaPredicted RBP7.07□□□□□ -1.28
EPHA4-213ENST00000495693 TUBA4BQ9H853 241 aa7.07□□□□□ -1.28
EPHA4-213ENST00000495693 HEYLQ9NQ87 328 aaPredicted RBP7.07□□□□□ -1.28
EPHA4-213ENST00000495693 MANBALQ9NQG1 85 aa7.07□□□□□ -1.28
EPHA4-213ENST00000495693 SLC35D1Q9NTN3 355 aa7.07□□□□□ -1.28
EPHA4-213ENST00000495693 TMEM140Q9NV12 185 aa7.07□□□□□ -1.28
EPHA4-213ENST00000495693 BET1LQ9NYM9 111 aa7.07□□□□□ -1.28
EPHA4-213ENST00000495693 CISD1Q9NZ45 108 aaKnown RBP7.07□□□□□ -1.28
EPHA4-213ENST00000495693 A0A087X0M5 115 aa7.06□□□□□ -1.28
EPHA4-213ENST00000495693 CTXND1A0A1B0GTU2 59 aa7.06□□□□□ -1.28
EPHA4-213ENST00000495693 A0A1B0GX30 115 aa7.06□□□□□ -1.28
EPHA4-213ENST00000495693 A0A1W2PN81 502 aa7.06□□□□□ -1.28
EPHA4-213ENST00000495693 E7EQL1 145 aa7.06□□□□□ -1.28
EPHA4-213ENST00000495693 GOSR1O95249 250 aa7.06□□□□□ -1.28
EPHA4-213ENST00000495693 MT-CO2P00403 227 aa7.06□□□□□ -1.28
EPHA4-213ENST00000495693 ADCYAP1P18509 176 aa7.06□□□□□ -1.28
EPHA4-213ENST00000495693 AGAP20933 346 aa7.06□□□□□ -1.28
EPHA4-213ENST00000495693 FGF7P21781 194 aa7.06□□□□□ -1.28
EPHA4-213ENST00000495693 CD1BP29016 333 aa7.06□□□□□ -1.28
EPHA4-213ENST00000495693 CHRNA7P36544 502 aa7.06□□□□□ -1.28
EPHA4-213ENST00000495693 HSPE1P61604 102 aaKnown RBP7.06□□□□□ -1.28
EPHA4-213ENST00000495693 AKR1C1Q04828 323 aa7.06□□□□□ -1.28
EPHA4-213ENST00000495693 ZNF672Q499Z4 452 aaPredicted RBP7.06□□□□□ -1.28
EPHA4-213ENST00000495693 CT45A1Q5HYN5 189 aa7.06□□□□□ -1.28
EPHA4-213ENST00000495693 OR8G2PQ6IF36 304 aa7.06□□□□□ -1.28
EPHA4-213ENST00000495693 ZNF833PQ6ZTB9 187 aa7.06□□□□□ -1.28
EPHA4-213ENST00000495693 MUC15Q8N387 334 aa7.06□□□□□ -1.28
EPHA4-213ENST00000495693 OR10X1Q8NGY0 326 aa7.06□□□□□ -1.28
EPHA4-213ENST00000495693 OR9G1Q8NH87 305 aa7.06□□□□□ -1.28
EPHA4-213ENST00000495693 CT45A3Q8NHU0 189 aa7.06□□□□□ -1.28
EPHA4-213ENST00000495693 NANPQ8TBE9 248 aa7.06□□□□□ -1.28
EPHA4-213ENST00000495693 NEU4Q8WWR8 484 aaPredicted RBP7.06□□□□□ -1.28
EPHA4-213ENST00000495693 RAB1CQ92928 201 aa7.06□□□□□ -1.28
EPHA4-213ENST00000495693 OR4C12Q96R67 309 aa7.06□□□□□ -1.28
EPHA4-213ENST00000495693 NIPSNAP3BQ9BS92 247 aa7.06□□□□□ -1.28
EPHA4-213ENST00000495693 DCTN5Q9BTE1 182 aa7.06□□□□□ -1.28
EPHA4-213ENST00000495693 TMEM231Q9H6L2 316 aa7.06□□□□□ -1.28
EPHA4-213ENST00000495693 SLC39A9Q9NUM3 307 aa7.06□□□□□ -1.28
EPHA4-213ENST00000495693 FAM96BQ9Y3D0 163 aa7.06□□□□□ -1.28
EPHA4-213ENST00000495693 AMMECR1Q9Y4X0 333 aaPredicted RBP7.06□□□□□ -1.28
EPHA4-213ENST00000495693 TTC28Q96AY4 2481 aa7.06□□□□□ -1.28
EPHA4-213ENST00000495693 SMCO3A2RU48 225 aa7.05□□□□□ -1.28
EPHA4-213ENST00000495693 KRTAP9-7A8MTY7 169 aa7.05□□□□□ -1.28
EPHA4-213ENST00000495693 FAM157AC9JC47 383 aa7.05□□□□□ -1.28
EPHA4-213ENST00000495693 INS-IGF2F8WCM5 200 aa7.05□□□□□ -1.28
EPHA4-213ENST00000495693 DNASE2O00115 360 aaPredicted RBP7.05□□□□□ -1.28
EPHA4-213ENST00000495693 HMGB3O15347 200 aaKnown RBP7.05□□□□□ -1.28
EPHA4-213ENST00000495693 USF1P22415 310 aaPredicted RBP7.05□□□□□ -1.28
EPHA4-213ENST00000495693 PSMB3P49720 205 aa7.05□□□□□ -1.28
EPHA4-213ENST00000495693 ZNF137PP52743 207 aa7.05□□□□□ -1.28
EPHA4-213ENST00000495693 SUB1P53999 127 aaKnown RBP eCLIP7.05□□□□□ -1.28
EPHA4-213ENST00000495693 PRRX1P54821 245 aa7.05□□□□□ -1.28
EPHA4-213ENST00000495693 BRWD1-AS2P59051 145 aa7.05□□□□□ -1.28
EPHA4-213ENST00000495693 RUNX1Q01196 453 aa7.05□□□□□ -1.28
EPHA4-213ENST00000495693 FLI1Q01543 452 aaPredicted RBP7.05□□□□□ -1.28
EPHA4-213ENST00000495693 TMEM249Q2WGJ8 235 aa7.05□□□□□ -1.28
EPHA4-213ENST00000495693 FAM74A3Q4VXF1 159 aa7.05□□□□□ -1.28
EPHA4-213ENST00000495693 PRR30Q53SZ7 412 aaPredicted RBP7.05□□□□□ -1.28
EPHA4-213ENST00000495693 RPL39P5Q59GN2 51 aa7.05□□□□□ -1.28
EPHA4-213ENST00000495693 SLC35E3Q7Z769 313 aa7.05□□□□□ -1.28
EPHA4-213ENST00000495693 SLC24A4Q8NFF2 622 aa7.05□□□□□ -1.28
EPHA4-213ENST00000495693 OR4C13Q8NGP0 309 aa7.05□□□□□ -1.28
EPHA4-213ENST00000495693 H1FXQ92522 213 aaKnown RBP7.05□□□□□ -1.28
EPHA4-213ENST00000495693 QTRT1Q9BXR0 403 aaKnown RBP7.05□□□□□ -1.28
EPHA4-213ENST00000495693 NPCDR1Q9BY65 106 aa7.05□□□□□ -1.28
EPHA4-213ENST00000495693 PLEKHA3Q9HB20 300 aa7.05□□□□□ -1.28
EPHA4-213ENST00000495693 NPVFQ9HCQ7 196 aa7.05□□□□□ -1.28
EPHA4-213ENST00000495693 TMEM14BQ9NUH8 114 aa7.05□□□□□ -1.28
EPHA4-213ENST00000495693 MIOXQ9UGB7 285 aa7.05□□□□□ -1.28
EPHA4-213ENST00000495693 VAX2Q9UIW0 290 aa7.05□□□□□ -1.28
EPHA4-213ENST00000495693 RALYQ9UKM9 306 aaKnown RBP7.05□□□□□ -1.28
EPHA4-213ENST00000495693 WDR83OSQ9Y284 106 aa7.05□□□□□ -1.28
EPHA4-213ENST00000495693 HEATR1Q9H583 2144 aaKnown RBP7.04□□□□□ -1.28
EPHA4-213ENST00000495693 MAP1LC3B2A6NCE7 125 aa7.04□□□□□ -1.28
EPHA4-213ENST00000495693 CXorf65A6NEN9 183 aa7.04□□□□□ -1.28
EPHA4-213ENST00000495693 FAM90A27PA6NNH2 459 aa7.04□□□□□ -1.28
EPHA4-213ENST00000495693 PMS2P5A8MQ11 134 aa7.04□□□□□ -1.28
EPHA4-213ENST00000495693 M0R036 132 aa7.04□□□□□ -1.28
EPHA4-213ENST00000495693 DVL1O14640 695 aa7.04□□□□□ -1.28
EPHA4-213ENST00000495693 TNFRSF13BO14836 293 aaPredicted RBP7.04□□□□□ -1.28
EPHA4-213ENST00000495693 C1QL1O75973 258 aa7.04□□□□□ -1.28
EPHA4-213ENST00000495693 KBTBD11O94819 623 aa7.04□□□□□ -1.28
EPHA4-213ENST00000495693 TFF1P04155 84 aa7.04□□□□□ -1.28
EPHA4-213ENST00000495693 IFNA4P05014 189 aa7.04□□□□□ -1.28
EPHA4-213ENST00000495693 OR9G9P0C7N8 305 aa7.04□□□□□ -1.28
EPHA4-213ENST00000495693 BCL2P10415 239 aa7.04□□□□□ -1.28
EPHA4-213ENST00000495693 NPY1RP25929 384 aa7.04□□□□□ -1.28
EPHA4-213ENST00000495693 OPRK1P41145 380 aa7.04□□□□□ -1.28
EPHA4-213ENST00000495693 LGALS7P47929 136 aa7.04□□□□□ -1.28
EPHA4-213ENST00000495693 GNG10P50151 68 aa7.04□□□□□ -1.28
EPHA4-213ENST00000495693 ZNF134P52741 427 aa7.04□□□□□ -1.28
EPHA4-213ENST00000495693 ERHP84090 104 aaKnown RBP7.04□□□□□ -1.28
EPHA4-213ENST00000495693 PRCDQ00LT1 54 aa7.04□□□□□ -1.28
EPHA4-213ENST00000495693 SSX2Q16385 188 aa7.04□□□□□ -1.28
EPHA4-213ENST00000495693 GUCA2BQ16661 112 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms