RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 ZNF85Q03923 595 aa6.01□□□□□ -1.45
GARNL3-219ENST00000495172 VMA21Q3ZAQ7 101 aa6.01□□□□□ -1.45
GARNL3-219ENST00000495172 NXNL2Q5VZ03 156 aa6.01□□□□□ -1.45
GARNL3-219ENST00000495172 CD300LDQ6UXZ3 194 aa6.01□□□□□ -1.45
GARNL3-219ENST00000495172 SLC25A42Q86VD7 318 aa6.01□□□□□ -1.45
GARNL3-219ENST00000495172 HS3ST5Q8IZT8 346 aa6.01□□□□□ -1.45
GARNL3-219ENST00000495172 TEX45Q8NA69 505 aa6.01□□□□□ -1.45
GARNL3-219ENST00000495172 OR14A2Q96R54 314 aa6.01□□□□□ -1.45
GARNL3-219ENST00000495172 SAR1AQ9NR31 198 aa6.01□□□□□ -1.45
GARNL3-219ENST00000495172 RFNGQ9Y644 331 aa6.01□□□□□ -1.45
GARNL3-219ENST00000495172 LOC102723971A0A1B0GUV8 181 aa6□□□□□ -1.45
GARNL3-219ENST00000495172 CGB1A6NKQ9 187 aa6□□□□□ -1.45
GARNL3-219ENST00000495172 DBX1A6NMT0 343 aa6□□□□□ -1.45
GARNL3-219ENST00000495172 OR4C45A6NMZ5 311 aa6□□□□□ -1.45
GARNL3-219ENST00000495172 K7EMT4 169 aa6□□□□□ -1.45
GARNL3-219ENST00000495172 NDUFA4O00483 81 aa6□□□□□ -1.45
GARNL3-219ENST00000495172 IGKV3-20P01619 116 aa6□□□□□ -1.45
GARNL3-219ENST00000495172 IGLV2-8P01709 118 aa6□□□□□ -1.45
GARNL3-219ENST00000495172 CRYGCP07315 174 aa6□□□□□ -1.45
GARNL3-219ENST00000495172 DEFA4P12838 97 aa6□□□□□ -1.45
GARNL3-219ENST00000495172 ATP6V1B2P21281 511 aa6□□□□□ -1.45
GARNL3-219ENST00000495172 OXA1LQ15070 435 aa6□□□□□ -1.45
GARNL3-219ENST00000495172 LINC01620Q4KN68 170 aa6□□□□□ -1.45
GARNL3-219ENST00000495172 GLT8D1Q68CQ7 371 aa6□□□□□ -1.45
GARNL3-219ENST00000495172 CGB2Q6NT52 195 aa6□□□□□ -1.45
GARNL3-219ENST00000495172 SCXQ7RTU7 201 aa6□□□□□ -1.45
GARNL3-219ENST00000495172 ARPINQ7Z6K5 226 aa6□□□□□ -1.45
GARNL3-219ENST00000495172 CBR4Q8N4T8 237 aa6□□□□□ -1.45
GARNL3-219ENST00000495172 UBAC2Q8NBM4 344 aa6□□□□□ -1.45
GARNL3-219ENST00000495172 OR6M1Q8NGM8 313 aa6□□□□□ -1.45
GARNL3-219ENST00000495172 CMTM3Q96MX0 182 aa6□□□□□ -1.45
GARNL3-219ENST00000495172 SMPD3Q9NY59 655 aaPredicted RBP6□□□□□ -1.45
GARNL3-219ENST00000495172 IL36GQ9NZH8 169 aa6□□□□□ -1.45
GARNL3-219ENST00000495172 TMEM189A5PLL7 270 aa5.99□□□□□ -1.45
GARNL3-219ENST00000495172 M0QYG6 137 aa5.99□□□□□ -1.45
GARNL3-219ENST00000495172 ST8SIA3O43173 380 aa5.99□□□□□ -1.45
GARNL3-219ENST00000495172 YIF1AO95070 293 aa5.99□□□□□ -1.45
GARNL3-219ENST00000495172 CD3GP09693 182 aa5.99□□□□□ -1.45
GARNL3-219ENST00000495172 RAB3AP20336 220 aa5.99□□□□□ -1.45
GARNL3-219ENST00000495172 RPL27AP46776 148 aaKnown RBP5.99□□□□□ -1.45
GARNL3-219ENST00000495172 PAFAH1B2P68402 229 aa5.99□□□□□ -1.45
GARNL3-219ENST00000495172 STXBP6Q8NFX7 210 aa5.99□□□□□ -1.45
GARNL3-219ENST00000495172 OR5D14Q8NGL3 314 aa5.99□□□□□ -1.45
GARNL3-219ENST00000495172 FCGR1BQ92637 280 aa5.99□□□□□ -1.45
GARNL3-219ENST00000495172 CXorf58Q96LI9 332 aa5.99□□□□□ -1.45
GARNL3-219ENST00000495172 RAB40CQ96S21 281 aa5.99□□□□□ -1.45
GARNL3-219ENST00000495172 ELAC2Q9BQ52 826 aaKnown RBP5.99□□□□□ -1.45
GARNL3-219ENST00000495172 TM2D1Q9BX74 207 aa5.99□□□□□ -1.45
GARNL3-219ENST00000495172 SDHAF2Q9NX18 166 aa5.99□□□□□ -1.45
GARNL3-219ENST00000495172 ABRACLQ9P1F3 81 aa5.99□□□□□ -1.45
GARNL3-219ENST00000495172 ABCD2Q9UBJ2 740 aa5.99□□□□□ -1.45
GARNL3-219ENST00000495172 AP3M1Q9Y2T2 418 aa5.99□□□□□ -1.45
GARNL3-219ENST00000495172 A0A0J9YY99 117 aa5.98□□□□□ -1.45
GARNL3-219ENST00000495172 LINC00473A8K010 186 aa5.98□□□□□ -1.45
GARNL3-219ENST00000495172 C15orf62A8K5M9 175 aa5.98□□□□□ -1.45
GARNL3-219ENST00000495172 SULT1C4O75897 302 aa5.98□□□□□ -1.45
GARNL3-219ENST00000495172 GTF2F2P13984 249 aa5.98□□□□□ -1.45
GARNL3-219ENST00000495172 IGFBP3P17936 291 aaPredicted RBP5.98□□□□□ -1.45
GARNL3-219ENST00000495172 PRKACGP22612 351 aa5.98□□□□□ -1.45
GARNL3-219ENST00000495172 PSMD7P51665 324 aa5.98□□□□□ -1.45
GARNL3-219ENST00000495172 CCR9P51686 369 aa5.98□□□□□ -1.45
GARNL3-219ENST00000495172 PSME3P61289 254 aa5.98□□□□□ -1.45
GARNL3-219ENST00000495172 CDK10Q15131 360 aa5.98□□□□□ -1.45
GARNL3-219ENST00000495172 ATP6AP1Q15904 470 aa5.98□□□□□ -1.45
GARNL3-219ENST00000495172 OR2B11Q5JQS5 317 aa5.98□□□□□ -1.45
GARNL3-219ENST00000495172 AADACL4Q5VUY2 407 aa5.98□□□□□ -1.45
GARNL3-219ENST00000495172 Q6ZSA8 131 aa5.98□□□□□ -1.45
GARNL3-219ENST00000495172 PARP16Q8N5Y8 322 aa5.98□□□□□ -1.45
GARNL3-219ENST00000495172 NEU1Q99519 415 aa5.98□□□□□ -1.45
GARNL3-219ENST00000495172 HDHD3Q9BSH5 251 aaPredicted RBP5.98□□□□□ -1.45
GARNL3-219ENST00000495172 FAAP24Q9BTP7 215 aa5.98□□□□□ -1.45
GARNL3-219ENST00000495172 SELENOIQ9C0D9 397 aa5.98□□□□□ -1.45
GARNL3-219ENST00000495172 IGKV1-6A0A0C4DH72 117 aa5.97□□□□□ -1.45
GARNL3-219ENST00000495172 K7EQG2 157 aa5.97□□□□□ -1.45
GARNL3-219ENST00000495172 ZNF735P0CB33 412 aa5.97□□□□□ -1.45
GARNL3-219ENST00000495172 OSMP13725 252 aa5.97□□□□□ -1.45
GARNL3-219ENST00000495172 PTBP1P26599 531 aaKnown RBP eCLIP5.97□□□□□ -1.459e-6■■■■□ 22.3
GARNL3-219ENST00000495172 RASSF2P50749 326 aa5.97□□□□□ -1.45
GARNL3-219ENST00000495172 MAPRE2Q15555 327 aa5.97□□□□□ -1.45
GARNL3-219ENST00000495172 KLK9Q2XQG4 91 aa5.97□□□□□ -1.45
GARNL3-219ENST00000495172 DDI2Q5TDH0 399 aa5.97□□□□□ -1.45
GARNL3-219ENST00000495172 CYP2R1Q6VVX0 501 aa5.97□□□□□ -1.45
GARNL3-219ENST00000495172 FAM220AQ7Z4H9 259 aa5.97□□□□□ -1.45
GARNL3-219ENST00000495172 MMD2Q8IY49 270 aa5.97□□□□□ -1.45
GARNL3-219ENST00000495172 GIPC3Q8TF64 312 aa5.97□□□□□ -1.45
GARNL3-219ENST00000495172 NSMCE2Q96MF7 247 aa5.97□□□□□ -1.45
GARNL3-219ENST00000495172 PDCD1LG2Q9BQ51 273 aa5.97□□□□□ -1.45
GARNL3-219ENST00000495172 UPK3BQ9BT76 320 aa5.97□□□□□ -1.45
GARNL3-219ENST00000495172 OR2D2Q9H210 308 aa5.97□□□□□ -1.45
GARNL3-219ENST00000495172 REEP1Q9H902 201 aa5.97□□□□□ -1.45
GARNL3-219ENST00000495172 KLK9Q9UKQ9 250 aa5.97□□□□□ -1.45
GARNL3-219ENST00000495172 MRPS16Q9Y3D3 137 aaKnown RBP5.97□□□□□ -1.45
GARNL3-219ENST00000495172 PUS1Q9Y606 427 aaKnown RBP eCLIP5.97□□□□□ -1.45
GARNL3-219ENST00000495172 RS1O15537 224 aa5.96□□□□□ -1.46
GARNL3-219ENST00000495172 HTR1AP08908 422 aa5.96□□□□□ -1.46
GARNL3-219ENST00000495172 COX4I1P13073 169 aa5.96□□□□□ -1.46
GARNL3-219ENST00000495172 HIST1H1BP16401 226 aaKnown RBP5.96□□□□□ -1.46
GARNL3-219ENST00000495172 ZNF93P35789 620 aaPredicted RBP5.96□□□□□ -1.46
GARNL3-219ENST00000495172 IRF3Q14653 427 aa5.96□□□□□ -1.46
GARNL3-219ENST00000495172 RTL8BQ17RB0 113 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms