RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 MAS1LP35410 378 aa17.53■□□□□ 0.4
COL27A1-208ENST00000494780 RPL27AP46776 148 aaKnown RBP17.53■□□□□ 0.4
COL27A1-208ENST00000494780 PUSL1Q8N0Z8 303 aaKnown RBP17.53■□□□□ 0.4
COL27A1-208ENST00000494780 TMEM167AQ8TBQ9 72 aa17.53■□□□□ 0.4
COL27A1-208ENST00000494780 SLC2A9Q9NRM0 540 aa17.53■□□□□ 0.4
COL27A1-208ENST00000494780 FBXL7Q9UJT9 491 aa17.53■□□□□ 0.4
COL27A1-208ENST00000494780 DPPA5A6NC42 116 aa17.52■□□□□ 0.4
COL27A1-208ENST00000494780 IL6RP08887 468 aaPredicted RBP17.52■□□□□ 0.4
COL27A1-208ENST00000494780 EIF4EBP1Q13541 118 aaPredicted RBP17.52■□□□□ 0.4
COL27A1-208ENST00000494780 IZUMO2Q6UXV1 221 aa17.52■□□□□ 0.4
COL27A1-208ENST00000494780 DEFB125Q8N687 156 aa17.52■□□□□ 0.4
COL27A1-208ENST00000494780 NUDCD2Q8WVJ2 157 aa17.52■□□□□ 0.4
COL27A1-208ENST00000494780 TCTEX1D2Q8WW35 142 aa17.52■□□□□ 0.4
COL27A1-208ENST00000494780 SMIM30A4D0T7 59 aa17.51■□□□□ 0.39
COL27A1-208ENST00000494780 RBMY1BA6NDE4 496 aaKnown RBP17.51■□□□□ 0.39
COL27A1-208ENST00000494780 RBMY1EA6NEQ0 496 aaKnown RBP17.51■□□□□ 0.39
COL27A1-208ENST00000494780 OR2C1O95371 312 aa17.51■□□□□ 0.39
COL27A1-208ENST00000494780 RBMY1DP0C7P1 496 aaKnown RBP17.51■□□□□ 0.39
COL27A1-208ENST00000494780 GUCA2BQ16661 112 aa17.51■□□□□ 0.39
COL27A1-208ENST00000494780 GPHB5Q86YW7 130 aa17.51■□□□□ 0.39
COL27A1-208ENST00000494780 FYTTD1Q96QD9 318 aaKnown RBP17.51■□□□□ 0.39
COL27A1-208ENST00000494780 FAM110AQ9BQ89 295 aa17.51■□□□□ 0.39
COL27A1-208ENST00000494780 ANXA10Q9UJ72 324 aa17.51■□□□□ 0.39
COL27A1-208ENST00000494780 SPATA2Q9UM82 520 aa17.51■□□□□ 0.39
COL27A1-208ENST00000494780 TMEM235A6NFC5 223 aa17.5■□□□□ 0.39
COL27A1-208ENST00000494780 OR11H12B2RN74 326 aa17.5■□□□□ 0.39
COL27A1-208ENST00000494780 E7EUB6 86 aa17.5■□□□□ 0.39
COL27A1-208ENST00000494780 MRPS14O60783 128 aaKnown RBP17.5■□□□□ 0.39
COL27A1-208ENST00000494780 JTBO76095 146 aa17.5■□□□□ 0.39
COL27A1-208ENST00000494780 DHFRP00374 187 aa17.5■□□□□ 0.39
COL27A1-208ENST00000494780 HLA-AP01891 365 aaKnown RBP17.5■□□□□ 0.39
COL27A1-208ENST00000494780 CRYGCP07315 174 aa17.5■□□□□ 0.39
COL27A1-208ENST00000494780 ZNF735P0CB33 412 aa17.5■□□□□ 0.39
COL27A1-208ENST00000494780 FGF9P31371 208 aaPredicted RBP17.5■□□□□ 0.39
COL27A1-208ENST00000494780 GNG2P59768 71 aa17.5■□□□□ 0.39
COL27A1-208ENST00000494780 ZNF66Q6ZN08 573 aa17.5■□□□□ 0.39
COL27A1-208ENST00000494780 C19orf35Q6ZS72 473 aa17.5■□□□□ 0.39
COL27A1-208ENST00000494780 MFSD4AQ8N468 514 aa17.5■□□□□ 0.39
COL27A1-208ENST00000494780 FANCD2OSQ96PS1 177 aa17.5■□□□□ 0.39
COL27A1-208ENST00000494780 SRD5A3Q9H8P0 318 aa17.5■□□□□ 0.39
COL27A1-208ENST00000494780 EDN2P20800 178 aa17.49■□□□□ 0.39
COL27A1-208ENST00000494780 ARL3P36405 182 aa17.49■□□□□ 0.39
COL27A1-208ENST00000494780 BRWD1-AS2P59051 145 aa17.49■□□□□ 0.39
COL27A1-208ENST00000494780 GABARAPL2P60520 117 aa17.49■□□□□ 0.39
COL27A1-208ENST00000494780 KLK9Q2XQG4 91 aa17.49■□□□□ 0.39
COL27A1-208ENST00000494780 TPRA1Q86W33 373 aa17.49■□□□□ 0.39
COL27A1-208ENST00000494780 WFDC10AQ9H1F0 79 aa17.49■□□□□ 0.39
COL27A1-208ENST00000494780 TXNL4BQ9NX01 149 aaKnown RBP17.49■□□□□ 0.39
COL27A1-208ENST00000494780 TAS2R8Q9NYW2 309 aa17.49■□□□□ 0.39
COL27A1-208ENST00000494780 KLK9Q9UKQ9 250 aa17.49■□□□□ 0.39
COL27A1-208ENST00000494780 A0A1B0GW64 132 aa17.48■□□□□ 0.39
COL27A1-208ENST00000494780 SSX5O60225 188 aa17.48■□□□□ 0.39
COL27A1-208ENST00000494780 NDUFB8O95169 186 aa17.48■□□□□ 0.39
COL27A1-208ENST00000494780 HRASP01112 189 aa17.48■□□□□ 0.39
COL27A1-208ENST00000494780 HIST1H1BP16401 226 aaKnown RBP17.48■□□□□ 0.39
COL27A1-208ENST00000494780 CBLN1P23435 193 aa17.48■□□□□ 0.39
COL27A1-208ENST00000494780 PSMB6P28072 239 aa17.48■□□□□ 0.39
COL27A1-208ENST00000494780 UBE2UQ5VVX9 321 aa17.48■□□□□ 0.39
COL27A1-208ENST00000494780 CLEC19AQ6UXS0 136 aa17.48■□□□□ 0.39
COL27A1-208ENST00000494780 EEF1AKMT3Q96AZ1 226 aa17.48■□□□□ 0.39
COL27A1-208ENST00000494780 WDR89Q96FK6 387 aaPredicted RBP17.48■□□□□ 0.39
COL27A1-208ENST00000494780 CCDC140Q96MF4 163 aa17.48■□□□□ 0.39
COL27A1-208ENST00000494780 DAPK2Q9UIK4 370 aa17.48■□□□□ 0.39
COL27A1-208ENST00000494780 IGHV3-23P01764 117 aa17.47■□□□□ 0.39
COL27A1-208ENST00000494780 AREGP15514 252 aa17.47■□□□□ 0.39
COL27A1-208ENST00000494780 CTRB1P17538 263 aa17.47■□□□□ 0.39
COL27A1-208ENST00000494780 RPL8P62917 257 aaKnown RBP17.47■□□□□ 0.39
COL27A1-208ENST00000494780 MSMO1Q15800 293 aa17.47■□□□□ 0.39
COL27A1-208ENST00000494780 FAM106AQ4KMX7 169 aa17.47■□□□□ 0.39
COL27A1-208ENST00000494780 CTRB2Q6GPI1 263 aa17.47■□□□□ 0.39
COL27A1-208ENST00000494780 SLC16A13Q7RTY0 426 aa17.47■□□□□ 0.39
COL27A1-208ENST00000494780 A8MWP6 167 aa17.46■□□□□ 0.39
COL27A1-208ENST00000494780 ZNF57Q68EA5 555 aaPredicted RBP17.46■□□□□ 0.39
COL27A1-208ENST00000494780 SSX9Q7RTT3 188 aa17.46■□□□□ 0.39
COL27A1-208ENST00000494780 OR4A5Q8NH83 315 aa17.46■□□□□ 0.39
COL27A1-208ENST00000494780 LGALS14Q8TCE9 139 aa17.46■□□□□ 0.39
COL27A1-208ENST00000494780 AIFM2Q9BRQ8 373 aa17.46■□□□□ 0.39
COL27A1-208ENST00000494780 RAB26Q9ULW5 256 aa17.46■□□□□ 0.39
COL27A1-208ENST00000494780 RRP15Q9Y3B9 282 aaKnown RBP17.46■□□□□ 0.39
COL27A1-208ENST00000494780 EPPK1P58107 5090 aaKnown RBP17.45■□□□□ 0.38
COL27A1-208ENST00000494780 TMEM213A2RRL7 107 aa17.45■□□□□ 0.38
COL27A1-208ENST00000494780 HLA-GP17693 338 aa17.45■□□□□ 0.38
COL27A1-208ENST00000494780 OR4A47Q6IF82 309 aa17.45■□□□□ 0.38
COL27A1-208ENST00000494780 SFXN4Q6P4A7 337 aa17.45■□□□□ 0.38
COL27A1-208ENST00000494780 CACNG8Q8WXS5 425 aa17.45■□□□□ 0.38
COL27A1-208ENST00000494780 RHBDL2Q9NX52 303 aa17.45■□□□□ 0.38
COL27A1-208ENST00000494780 BET1LQ9NYM9 111 aa17.45■□□□□ 0.38
COL27A1-208ENST00000494780 S4R3C0 116 aa17.45■□□□□ 0.38
COL27A1-208ENST00000494780 ZNF320A2RRD8 509 aa17.44■□□□□ 0.38
COL27A1-208ENST00000494780 DEFA4P12838 97 aa17.44■□□□□ 0.38
COL27A1-208ENST00000494780 PSMB9P28065 219 aa17.44■□□□□ 0.38
COL27A1-208ENST00000494780 ARPC4P59998 168 aa17.44■□□□□ 0.38
COL27A1-208ENST00000494780 TMEM61Q8N0U2 210 aa17.44■□□□□ 0.38
COL27A1-208ENST00000494780 ZBTB34Q8NCN2 500 aa17.44■□□□□ 0.38
COL27A1-208ENST00000494780 BEST4Q8NFU0 473 aa17.44■□□□□ 0.38
COL27A1-208ENST00000494780 GPHA2Q96T91 129 aa17.44■□□□□ 0.38
COL27A1-208ENST00000494780 CCL28Q9NRJ3 127 aa17.44■□□□□ 0.38
COL27A1-208ENST00000494780 SSR3Q9UNL2 185 aa17.44■□□□□ 0.38
COL27A1-208ENST00000494780 IGLV11-55A0A075B6I3 123 aa17.43■□□□□ 0.38
COL27A1-208ENST00000494780 TRBV7-1A0A0A6YYK4 115 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms