RNA–Protein interactions for RNA: ENST00000494569.5

ZIC4-216, Transcript of Zic family member 4, humanhuman

TSL 2

Gene ZIC4, Length 3,317 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4-216ENST00000494569 CCL8P80075 99 aa9.04□□□□□ -0.96
ZIC4-216ENST00000494569 USF2Q15853 346 aaPredicted RBP9.04□□□□□ -0.96
ZIC4-216ENST00000494569 LHFPL4Q7Z7J7 247 aa9.04□□□□□ -0.96
ZIC4-216ENST00000494569 CENPVQ7Z7K6 275 aaPredicted RBP9.04□□□□□ -0.96
ZIC4-216ENST00000494569 ZCCHC24Q8N2G6 241 aaKnown RBP9.04□□□□□ -0.96
ZIC4-216ENST00000494569 YPEL4Q96NS1 127 aa9.04□□□□□ -0.96
ZIC4-216ENST00000494569 ANKRD17O75179 2603 aaKnown RBP9.04□□□□□ -0.96
ZIC4-216ENST00000494569 A0A1W2PPE2 198 aa9.03□□□□□ -0.96
ZIC4-216ENST00000494569 SYNGR2O43760 224 aa9.03□□□□□ -0.96
ZIC4-216ENST00000494569 SMIM6P0DI80 62 aa9.03□□□□□ -0.96
ZIC4-216ENST00000494569 OR13C7P0DN81 318 aa9.03□□□□□ -0.96
ZIC4-216ENST00000494569 AGAP20933 346 aa9.03□□□□□ -0.96
ZIC4-216ENST00000494569 CDKN1BP46527 198 aa9.03□□□□□ -0.96
ZIC4-216ENST00000494569 DLX6P56179 175 aa9.03□□□□□ -0.96
ZIC4-216ENST00000494569 LINC00205P59089 165 aa9.03□□□□□ -0.96
ZIC4-216ENST00000494569 MEF2CQ06413 473 aaPredicted RBP9.03□□□□□ -0.96
ZIC4-216ENST00000494569 CATR1Q13166 79 aa9.03□□□□□ -0.96
ZIC4-216ENST00000494569 NCR3LG1Q68D85 454 aa9.03□□□□□ -0.96
ZIC4-216ENST00000494569 FAM213BQ8TBF2 198 aa9.03□□□□□ -0.96
ZIC4-216ENST00000494569 BORCS7-ASMTA0A0B4J1R7 106 aa9.03□□□□□ -0.96
ZIC4-216ENST00000494569 UMAD1C9J7I0 102 aa9.03□□□□□ -0.96
ZIC4-216ENST00000494569 CCL21O00585 134 aa9.03□□□□□ -0.96
ZIC4-216ENST00000494569 PLAUP00749 431 aa9.03□□□□□ -0.96
ZIC4-216ENST00000494569 PRH1P02810 166 aa9.03□□□□□ -0.96
ZIC4-216ENST00000494569 LIPFP07098 398 aa9.03□□□□□ -0.96
ZIC4-216ENST00000494569 DYNLT3P51808 116 aa9.03□□□□□ -0.96
ZIC4-216ENST00000494569 VWC2Q2TAL6 325 aa9.03□□□□□ -0.96
ZIC4-216ENST00000494569 BTNL3Q6UXE8 466 aa9.03□□□□□ -0.96
ZIC4-216ENST00000494569 TMEM14EPQ6UXP3 125 aa9.03□□□□□ -0.96
ZIC4-216ENST00000494569 ZGRF1Q86YA3 2104 aa9.03□□□□□ -0.96
ZIC4-216ENST00000494569 ZNF808Q8N4W9 903 aaPredicted RBP9.03□□□□□ -0.96
ZIC4-216ENST00000494569 SSX3Q99909 188 aa9.03□□□□□ -0.96
ZIC4-216ENST00000494569 IDI2-AS1Q9NZ38 188 aa9.03□□□□□ -0.96
ZIC4-216ENST00000494569 LINC00312Q9Y6C7 94 aa9.03□□□□□ -0.96
ZIC4-216ENST00000494569 NBASA2RRP1 2371 aa9.03□□□□□ -0.96
ZIC4-216ENST00000494569 ITPR2Q14571 2701 aa9.03□□□□□ -0.96
ZIC4-216ENST00000494569 LRRC30A6NM36 301 aa9.03□□□□□ -0.96
ZIC4-216ENST00000494569 ATP6V0CP27449 155 aa9.03□□□□□ -0.96
ZIC4-216ENST00000494569 TAS2R60P59551 318 aa9.03□□□□□ -0.96
ZIC4-216ENST00000494569 ARL16Q0P5N6 197 aa9.03□□□□□ -0.96
ZIC4-216ENST00000494569 SPXQ9BT56 116 aa9.03□□□□□ -0.96
ZIC4-216ENST00000494569 KCNJ16Q9NPI9 418 aa9.03□□□□□ -0.96
ZIC4-216ENST00000494569 TMEM106BQ9NUM4 274 aa9.03□□□□□ -0.96
ZIC4-216ENST00000494569 NOTCH2Q04721 2471 aa9.03□□□□□ -0.96
ZIC4-216ENST00000494569 DOPEY1Q5JWR5 2465 aa9.03□□□□□ -0.96
ZIC4-216ENST00000494569 CREBBPQ92793 2442 aa9.02□□□□□ -0.96
ZIC4-216ENST00000494569 M0R036 132 aa9.02□□□□□ -0.97
ZIC4-216ENST00000494569 MMP23AO75900 390 aa9.02□□□□□ -0.97
ZIC4-216ENST00000494569 IGHV2-70P01814 119 aa9.02□□□□□ -0.97
ZIC4-216ENST00000494569 SULT1A1P50225 295 aa9.02□□□□□ -0.97
ZIC4-216ENST00000494569 TNFRSF9Q07011 255 aa9.02□□□□□ -0.97
ZIC4-216ENST00000494569 HAGHQ16775 308 aa9.02□□□□□ -0.97
ZIC4-216ENST00000494569 ZNF672Q499Z4 452 aaPredicted RBP9.02□□□□□ -0.97
ZIC4-216ENST00000494569 FAM24BQ8N5W8 94 aa9.02□□□□□ -0.97
ZIC4-216ENST00000494569 RAB9BQ9NP90 201 aa9.02□□□□□ -0.97
ZIC4-216ENST00000494569 RPUSD1Q9UJJ7 312 aaKnown RBP9.02□□□□□ -0.97
ZIC4-216ENST00000494569 DIDO1Q9BTC0 2240 aaKnown RBP9.02□□□□□ -0.97
ZIC4-216ENST00000494569 TRAV38-1A0A0B4J264 116 aa9.02□□□□□ -0.97
ZIC4-216ENST00000494569 C1orf196B1AJZ1 125 aa9.02□□□□□ -0.97
ZIC4-216ENST00000494569 OR8U8P0C7N1 319 aa9.02□□□□□ -0.97
ZIC4-216ENST00000494569 NDUFB7P17568 137 aa9.02□□□□□ -0.97
ZIC4-216ENST00000494569 G6PCP35575 357 aa9.02□□□□□ -0.97
ZIC4-216ENST00000494569 RUNX1Q01196 453 aa9.02□□□□□ -0.97
ZIC4-216ENST00000494569 KIAA2026Q5HYC2 2103 aa9.02□□□□□ -0.97
ZIC4-216ENST00000494569 SLC25A48Q6ZT89 311 aaKnown RBP9.02□□□□□ -0.97
ZIC4-216ENST00000494569 C8orf31Q8N9H6 132 aa9.02□□□□□ -0.97
ZIC4-216ENST00000494569 CD300LFQ8TDQ1 290 aa9.02□□□□□ -0.97
ZIC4-216ENST00000494569 RBKSQ9H477 322 aa9.02□□□□□ -0.97
ZIC4-216ENST00000494569 SAP30LQ9HAJ7 183 aa9.02□□□□□ -0.97
ZIC4-216ENST00000494569 CTSZQ9UBR2 303 aa9.02□□□□□ -0.97
ZIC4-216ENST00000494569 LAMP3Q9UQV4 416 aa9.02□□□□□ -0.97
ZIC4-216ENST00000494569 RBM7Q9Y580 266 aaKnown RBP9.02□□□□□ -0.97
ZIC4-216ENST00000494569 CACNA1DQ01668 2161 aa9.02□□□□□ -0.97
ZIC4-216ENST00000494569 TEP1Q99973 2627 aaKnown RBP9.02□□□□□ -0.97
ZIC4-216ENST00000494569 PRSS46E5RG02 174 aa9.02□□□□□ -0.97
ZIC4-216ENST00000494569 CST7O76096 145 aa9.02□□□□□ -0.97
ZIC4-216ENST00000494569 CD3EP07766 207 aa9.02□□□□□ -0.97
ZIC4-216ENST00000494569 FBP1P09467 338 aa9.02□□□□□ -0.97
ZIC4-216ENST00000494569 RAB7AP51149 207 aa9.02□□□□□ -0.97
ZIC4-216ENST00000494569 OR5C1Q8NGR4 320 aa9.02□□□□□ -0.97
ZIC4-216ENST00000494569 LINC01560Q8TB33 94 aa9.02□□□□□ -0.97
ZIC4-216ENST00000494569 TCTEX1D2Q8WW35 142 aa9.02□□□□□ -0.97
ZIC4-216ENST00000494569 ATP5SQ99766 215 aa9.02□□□□□ -0.97
ZIC4-216ENST00000494569 OR51M1Q9H341 326 aa9.02□□□□□ -0.97
ZIC4-216ENST00000494569 PUS1Q9Y606 427 aaKnown RBP eCLIP9.02□□□□□ -0.97
ZIC4-216ENST00000494569 ABCA12Q86UK0 2595 aa9.01□□□□□ -0.97
ZIC4-216ENST00000494569 PPIAL4EA0A075B759 164 aa9.01□□□□□ -0.97
ZIC4-216ENST00000494569 TRGV10A0A0A0MS01 117 aa9.01□□□□□ -0.97
ZIC4-216ENST00000494569 PPIAL4DF5H284 164 aa9.01□□□□□ -0.97
ZIC4-216ENST00000494569 ZG16O60844 167 aa9.01□□□□□ -0.97
ZIC4-216ENST00000494569 PPIAL4FP0DN26 164 aa9.01□□□□□ -0.97
ZIC4-216ENST00000494569 IRF2P14316 349 aa9.01□□□□□ -0.97
ZIC4-216ENST00000494569 COL8A1P27658 744 aa9.01□□□□□ -0.97
ZIC4-216ENST00000494569 RAB5CP51148 216 aa9.01□□□□□ -0.97
ZIC4-216ENST00000494569 EDDM3BP56851 147 aa9.01□□□□□ -0.97
ZIC4-216ENST00000494569 UBE2KP61086 200 aa9.01□□□□□ -0.97
ZIC4-216ENST00000494569 ZNF266Q14584 549 aa9.01□□□□□ -0.97
ZIC4-216ENST00000494569 MS4A5Q9H3V2 200 aa9.01□□□□□ -0.97
ZIC4-216ENST00000494569 PPIAL4AQ9Y536 164 aa9.01□□□□□ -0.97
ZIC4-216ENST00000494569 HPRT1P00492 218 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms