RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 PLA2G2AP14555 144 aa5.48□□□□□ -1.53
MSH5-217ENST00000494458 COX6B1P14854 86 aa5.48□□□□□ -1.53
MSH5-217ENST00000494458 ARF6P62330 175 aa5.48□□□□□ -1.53
MSH5-217ENST00000494458 ARL16Q0P5N6 197 aa5.48□□□□□ -1.53
MSH5-217ENST00000494458 EBI3Q14213 229 aa5.48□□□□□ -1.53
MSH5-217ENST00000494458 RTL8BQ17RB0 113 aa5.48□□□□□ -1.53
MSH5-217ENST00000494458 OR2B11Q5JQS5 317 aa5.48□□□□□ -1.53
MSH5-217ENST00000494458 MINOS1Q5TGZ0 78 aa5.48□□□□□ -1.53
MSH5-217ENST00000494458 PVRIGQ6DKI7 326 aa5.48□□□□□ -1.53
MSH5-217ENST00000494458 ALKAL2Q6UX46 152 aa5.48□□□□□ -1.53
MSH5-217ENST00000494458 THNSL2Q86YJ6 484 aa5.48□□□□□ -1.53
MSH5-217ENST00000494458 KRTAP1-3Q8IUG1 177 aa5.48□□□□□ -1.53
MSH5-217ENST00000494458 SLC7A5P1Q8MH63 180 aa5.48□□□□□ -1.53
MSH5-217ENST00000494458 LRRC75A-AS1Q8N1F1 130 aa5.48□□□□□ -1.53
MSH5-217ENST00000494458 TEX45Q8NA69 505 aa5.48□□□□□ -1.53
MSH5-217ENST00000494458 OR10X1Q8NGY0 326 aa5.48□□□□□ -1.53
MSH5-217ENST00000494458 TMEM170AQ8WVE7 144 aa5.48□□□□□ -1.53
MSH5-217ENST00000494458 CFHR4Q92496 578 aa5.48□□□□□ -1.53
MSH5-217ENST00000494458 CCL19Q99731 98 aa5.48□□□□□ -1.53
MSH5-217ENST00000494458 QTRT1Q9BXR0 403 aaKnown RBP5.48□□□□□ -1.53
MSH5-217ENST00000494458 REG4Q9BYZ8 158 aa5.48□□□□□ -1.53
MSH5-217ENST00000494458 DPM3Q9P2X0 92 aa5.48□□□□□ -1.53
MSH5-217ENST00000494458 PRNDQ9UKY0 176 aa5.48□□□□□ -1.53
MSH5-217ENST00000494458 WASHC3Q9Y3C0 194 aa5.48□□□□□ -1.53
MSH5-217ENST00000494458 AMMECR1Q9Y4X0 333 aaPredicted RBP5.48□□□□□ -1.53
MSH5-217ENST00000494458 MINOS1-NBL1R4GNA1 71 aa5.48□□□□□ -1.53
MSH5-217ENST00000494458 FBN2P35556 2912 aa5.48□□□□□ -1.53
MSH5-217ENST00000494458 LRRK2Q5S007 2527 aa5.48□□□□□ -1.53
MSH5-217ENST00000494458 C15orf62A8K5M9 175 aa5.47□□□□□ -1.53
MSH5-217ENST00000494458 LEUTXA8MZ59 168 aa5.47□□□□□ -1.53
MSH5-217ENST00000494458 RNASEK-C17orf49H0YIS7 233 aa5.47□□□□□ -1.53
MSH5-217ENST00000494458 KBTBD11O94819 623 aa5.47□□□□□ -1.53
MSH5-217ENST00000494458 APOA2P02652 100 aa5.47□□□□□ -1.53
MSH5-217ENST00000494458 EPHA1P21709 976 aa5.47□□□□□ -1.53
MSH5-217ENST00000494458 CD1BP29016 333 aa5.47□□□□□ -1.53
MSH5-217ENST00000494458 SULT1A2P50226 295 aa5.47□□□□□ -1.53
MSH5-217ENST00000494458 RAB13P51153 203 aa5.47□□□□□ -1.53
MSH5-217ENST00000494458 UBE2E1P51965 193 aa5.47□□□□□ -1.53
MSH5-217ENST00000494458 ERVK-16P61578 105 aa5.47□□□□□ -1.53
MSH5-217ENST00000494458 VAMP2P63027 116 aa5.47□□□□□ -1.53
MSH5-217ENST00000494458 PRCDQ00LT1 54 aa5.47□□□□□ -1.53
MSH5-217ENST00000494458 ZNF266Q14584 549 aa5.47□□□□□ -1.53
MSH5-217ENST00000494458 ATP6V1FQ16864 119 aa5.47□□□□□ -1.53
MSH5-217ENST00000494458 TPTE2P1Q5T6R2 138 aa5.47□□□□□ -1.53
MSH5-217ENST00000494458 EIF5AL1Q6IS14 154 aaKnown RBP5.47□□□□□ -1.53
MSH5-217ENST00000494458 TGIF2LXQ8IUE1 241 aa5.47□□□□□ -1.53
MSH5-217ENST00000494458 OR8H3Q8N146 312 aa5.47□□□□□ -1.53
MSH5-217ENST00000494458 Q8N6K4 173 aa5.47□□□□□ -1.53
MSH5-217ENST00000494458 NPBQ8NG41 125 aa5.47□□□□□ -1.53
MSH5-217ENST00000494458 OR5C1Q8NGR4 320 aa5.47□□□□□ -1.53
MSH5-217ENST00000494458 OR5B3Q8NH48 314 aa5.47□□□□□ -1.53
MSH5-217ENST00000494458 VSTM2AQ8TAG5 236 aa5.47□□□□□ -1.53
MSH5-217ENST00000494458 DTD1Q8TEA8 209 aa5.47□□□□□ -1.53
MSH5-217ENST00000494458 FAM168AQ92567 244 aa5.47□□□□□ -1.53
MSH5-217ENST00000494458 FLYWCH2Q96CP2 140 aaKnown RBP5.47□□□□□ -1.53
MSH5-217ENST00000494458 MBD6Q96DN6 1003 aa5.47□□□□□ -1.53
MSH5-217ENST00000494458 SAT2Q96F10 170 aaPredicted RBP5.47□□□□□ -1.53
MSH5-217ENST00000494458 OR4C12Q96R67 309 aa5.47□□□□□ -1.53
MSH5-217ENST00000494458 TBX15Q96SF7 602 aa5.47□□□□□ -1.53
MSH5-217ENST00000494458 ATP5SQ99766 215 aa5.47□□□□□ -1.53
MSH5-217ENST00000494458 GGACTQ9BVM4 153 aa5.47□□□□□ -1.53
MSH5-217ENST00000494458 MMP26Q9NRE1 261 aa5.47□□□□□ -1.53
MSH5-217ENST00000494458 NDUFA4L2Q9NRX3 87 aa5.47□□□□□ -1.53
MSH5-217ENST00000494458 FKBP11Q9NYL4 201 aa5.47□□□□□ -1.53
MSH5-217ENST00000494458 PSENENQ9NZ42 101 aa5.47□□□□□ -1.53
MSH5-217ENST00000494458 TCF19Q9Y242 345 aa5.47□□□□□ -1.53
MSH5-217ENST00000494458 INSIG2Q9Y5U4 225 aa5.47□□□□□ -1.53
MSH5-217ENST00000494458 USP9YO00507 2555 aaPredicted RBP5.47□□□□□ -1.53
MSH5-217ENST00000494458 FAM208BQ5VWN6 2430 aa5.46□□□□□ -1.53
MSH5-217ENST00000494458 YLPM1P49750 1951 aaKnown RBP5.46□□□□□ -1.54
MSH5-217ENST00000494458 BORCS7-ASMTA0A0B4J1R7 106 aa5.46□□□□□ -1.54
MSH5-217ENST00000494458 IGHV4-61A0A0C4DH41 118 aa5.46□□□□□ -1.54
MSH5-217ENST00000494458 TEX50A0A1B0GTY4 177 aa5.46□□□□□ -1.54
MSH5-217ENST00000494458 CGB1A6NKQ9 187 aa5.46□□□□□ -1.54
MSH5-217ENST00000494458 FAM157AC9JC47 383 aa5.46□□□□□ -1.54
MSH5-217ENST00000494458 FNDC10F2Z333 226 aa5.46□□□□□ -1.54
MSH5-217ENST00000494458 J3QKU1 62 aa5.46□□□□□ -1.54
MSH5-217ENST00000494458 WRBO00258 174 aa5.46□□□□□ -1.54
MSH5-217ENST00000494458 DFFBO76075 338 aa5.46□□□□□ -1.54
MSH5-217ENST00000494458 SAA1P0DJI8 122 aaPredicted RBP5.46□□□□□ -1.54
MSH5-217ENST00000494458 HOXB4P17483 251 aaPredicted RBP5.46□□□□□ -1.54
MSH5-217ENST00000494458 USF1P22415 310 aaPredicted RBP5.46□□□□□ -1.54
MSH5-217ENST00000494458 HTR1DP28221 377 aa5.46□□□□□ -1.54
MSH5-217ENST00000494458 MAS1LP35410 378 aa5.46□□□□□ -1.54
MSH5-217ENST00000494458 RAB5CP51148 216 aa5.46□□□□□ -1.54
MSH5-217ENST00000494458 CAV2P51636 162 aa5.46□□□□□ -1.54
MSH5-217ENST00000494458 DYNLT3P51808 116 aa5.46□□□□□ -1.54
MSH5-217ENST00000494458 ATP5J2P56134 94 aa5.46□□□□□ -1.54
MSH5-217ENST00000494458 LRRC75BQ2VPJ9 315 aa5.46□□□□□ -1.54
MSH5-217ENST00000494458 CLEC9AQ6UXN8 241 aa5.46□□□□□ -1.54
MSH5-217ENST00000494458 VMO1Q7Z5L0 202 aa5.46□□□□□ -1.54
MSH5-217ENST00000494458 STX12Q86Y82 276 aa5.46□□□□□ -1.54
MSH5-217ENST00000494458 VKORC1L1Q8N0U8 176 aa5.46□□□□□ -1.54
MSH5-217ENST00000494458 PNKDQ8N490 385 aa5.46□□□□□ -1.54
MSH5-217ENST00000494458 OR4A16Q8NH70 328 aa5.46□□□□□ -1.54
MSH5-217ENST00000494458 RNASE11Q8TAA1 199 aaKnown RBP5.46□□□□□ -1.54
MSH5-217ENST00000494458 RNF141Q8WVD5 230 aa5.46□□□□□ -1.54
MSH5-217ENST00000494458 RITA1Q96K30 269 aa5.46□□□□□ -1.54
MSH5-217ENST00000494458 PIMREGQ9BSJ6 248 aa5.46□□□□□ -1.54
MSH5-217ENST00000494458 MS4A7Q9GZW8 240 aaPredicted RBP5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms