RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 FAM46BQ96A09 425 aa3.9□□□□□ -1.79
PTCD3-219ENST00000494323 TMEM106AQ96A25 262 aa3.9□□□□□ -1.79
PTCD3-219ENST00000494323 FLYWCH2Q96CP2 140 aaKnown RBP3.9□□□□□ -1.79
PTCD3-219ENST00000494323 MRPS24Q96EL2 167 aaKnown RBP3.9□□□□□ -1.79
PTCD3-219ENST00000494323 CPNE2Q96FN4 548 aaPredicted RBP3.9□□□□□ -1.79
PTCD3-219ENST00000494323 CENPNQ96H22 339 aaPredicted RBP3.9□□□□□ -1.79
PTCD3-219ENST00000494323 RDH12Q96NR8 316 aa3.9□□□□□ -1.79
PTCD3-219ENST00000494323 NABP2Q9BQ15 211 aa3.9□□□□□ -1.79
PTCD3-219ENST00000494323 ALKBH7Q9BT30 221 aaPredicted RBP3.9□□□□□ -1.79
PTCD3-219ENST00000494323 SPXQ9BT56 116 aa3.9□□□□□ -1.79
PTCD3-219ENST00000494323 GABARAPL3Q9BY60 117 aa3.9□□□□□ -1.79
PTCD3-219ENST00000494323 BANF2Q9H503 90 aa3.9□□□□□ -1.79
PTCD3-219ENST00000494323 TUBA4BQ9H853 241 aa3.9□□□□□ -1.79
PTCD3-219ENST00000494323 TAF9BQ9HBM6 251 aa3.9□□□□□ -1.79
PTCD3-219ENST00000494323 RETNQ9HD89 108 aa3.9□□□□□ -1.79
PTCD3-219ENST00000494323 TMEM138Q9NPI0 162 aa3.9□□□□□ -1.79
PTCD3-219ENST00000494323 ZNF355PQ9NSJ1 428 aa3.9□□□□□ -1.79
PTCD3-219ENST00000494323 CNOT2Q9NZN8 540 aaKnown RBP3.9□□□□□ -1.79
PTCD3-219ENST00000494323 GAB2Q9UQC2 676 aa3.9□□□□□ -1.79
PTCD3-219ENST00000494323 LYSTQ99698 3801 aa3.9□□□□□ -1.79
PTCD3-219ENST00000494323 SACSQ9NZJ4 4579 aa3.89□□□□□ -1.79
PTCD3-219ENST00000494323 IZUMO1RA6ND01 250 aa3.89□□□□□ -1.79
PTCD3-219ENST00000494323 IFITM10A6NMD0 228 aa3.89□□□□□ -1.79
PTCD3-219ENST00000494323 SNTNA6NMZ2 147 aa3.89□□□□□ -1.79
PTCD3-219ENST00000494323 DFFBO76075 338 aa3.89□□□□□ -1.79
PTCD3-219ENST00000494323 FADS2O95864 444 aaKnown RBP3.89□□□□□ -1.79
PTCD3-219ENST00000494323 IGLV1-51P01701 117 aa3.89□□□□□ -1.79
PTCD3-219ENST00000494323 TRGV3P03979 118 aa3.89□□□□□ -1.79
PTCD3-219ENST00000494323 MAS1P04201 325 aa3.89□□□□□ -1.79
PTCD3-219ENST00000494323 IFNA6P05013 189 aa3.89□□□□□ -1.79
PTCD3-219ENST00000494323 CD2P06729 351 aa3.89□□□□□ -1.79
PTCD3-219ENST00000494323 CT45A6P0DMU7 189 aa3.89□□□□□ -1.79
PTCD3-219ENST00000494323 CT45A5P0DMU8 189 aa3.89□□□□□ -1.79
PTCD3-219ENST00000494323 CT45A7P0DMV0 189 aa3.89□□□□□ -1.79
PTCD3-219ENST00000494323 TPPP2P59282 170 aa3.89□□□□□ -1.79
PTCD3-219ENST00000494323 PPP3R1P63098 170 aa3.89□□□□□ -1.79
PTCD3-219ENST00000494323 TMEM267Q0VDI3 215 aaPredicted RBP3.89□□□□□ -1.79
PTCD3-219ENST00000494323 MPV17LQ2QL34 196 aa3.89□□□□□ -1.79
PTCD3-219ENST00000494323 ACTBL2Q562R1 376 aa3.89□□□□□ -1.79
PTCD3-219ENST00000494323 RPL39P5Q59GN2 51 aa3.89□□□□□ -1.79
PTCD3-219ENST00000494323 NHLRC3Q5JS37 347 aa3.89□□□□□ -1.79
PTCD3-219ENST00000494323 C6orf183Q5T699 404 aa3.89□□□□□ -1.79
PTCD3-219ENST00000494323 OR2G6Q5TZ20 316 aa3.89□□□□□ -1.79
PTCD3-219ENST00000494323 C1orf146Q5VVC0 180 aa3.89□□□□□ -1.79
PTCD3-219ENST00000494323 ZNF660Q6AZW8 331 aaPredicted RBP3.89□□□□□ -1.79
PTCD3-219ENST00000494323 GLIPR1L1Q6UWM5 242 aa3.89□□□□□ -1.79
PTCD3-219ENST00000494323 IL34Q6ZMJ4 242 aa3.89□□□□□ -1.79
PTCD3-219ENST00000494323 LINC00596Q86U02 117 aa3.89□□□□□ -1.79
PTCD3-219ENST00000494323 CROCCP3Q8IVE0 287 aa3.89□□□□□ -1.79
PTCD3-219ENST00000494323 LAX1Q8IWV1 398 aa3.89□□□□□ -1.79
PTCD3-219ENST00000494323 SGPP2Q8IWX5 399 aa3.89□□□□□ -1.79
PTCD3-219ENST00000494323 STPG4Q8N801 248 aa3.89□□□□□ -1.79
PTCD3-219ENST00000494323 OR5T1Q8NG75 326 aa3.89□□□□□ -1.79
PTCD3-219ENST00000494323 OR52I1Q8NGK6 324 aa3.89□□□□□ -1.79
PTCD3-219ENST00000494323 GPR148Q8TDV2 347 aa3.89□□□□□ -1.79
PTCD3-219ENST00000494323 MRPL48Q96GC5 212 aaKnown RBP3.89□□□□□ -1.79
PTCD3-219ENST00000494323 ZNF184Q99676 751 aaPredicted RBP3.89□□□□□ -1.79
PTCD3-219ENST00000494323 SELENOIQ9C0D9 397 aa3.89□□□□□ -1.79
PTCD3-219ENST00000494323 PAK1IP1Q9NWT1 392 aaPredicted RBP3.89□□□□□ -1.79
PTCD3-219ENST00000494323 IL36GQ9NZH8 169 aa3.89□□□□□ -1.79
PTCD3-219ENST00000494323 KCNIP1Q9NZI2 227 aa3.89□□□□□ -1.79
PTCD3-219ENST00000494323 FOXA2Q9Y261 457 aaPredicted RBP3.89□□□□□ -1.79
PTCD3-219ENST00000494323 MRPS28Q9Y2Q9 187 aaKnown RBP3.89□□□□□ -1.79
PTCD3-219ENST00000494323 DNAH1Q9P2D7 4330 aa3.89□□□□□ -1.79
PTCD3-219ENST00000494323 TRAV8-7A0A075B6U6 113 aa3.88□□□□□ -1.79
PTCD3-219ENST00000494323 E5RGE8 158 aa3.88□□□□□ -1.79
PTCD3-219ENST00000494323 H7C2Y5 167 aa3.88□□□□□ -1.79
PTCD3-219ENST00000494323 EI24O14681 340 aa3.88□□□□□ -1.79
PTCD3-219ENST00000494323 YPEL1O60688 119 aa3.88□□□□□ -1.79
PTCD3-219ENST00000494323 ZNF780AO75290 641 aaPredicted RBP3.88□□□□□ -1.79
PTCD3-219ENST00000494323 CRTAPO75718 401 aaPredicted RBP3.88□□□□□ -1.79
PTCD3-219ENST00000494323 NDUFA3O95167 84 aa3.88□□□□□ -1.79
PTCD3-219ENST00000494323 LIMS3P0CW19 117 aa3.88□□□□□ -1.79
PTCD3-219ENST00000494323 LIMS4P0CW20 117 aa3.88□□□□□ -1.79
PTCD3-219ENST00000494323 SAA2P0DJI9 122 aaPredicted RBP3.88□□□□□ -1.79
PTCD3-219ENST00000494323 IGFBP3P17936 291 aaPredicted RBP3.88□□□□□ -1.79
PTCD3-219ENST00000494323 FUT3P21217 361 aa3.88□□□□□ -1.79
PTCD3-219ENST00000494323 CD40LGP29965 261 aa3.88□□□□□ -1.79
PTCD3-219ENST00000494323 ETV1P50549 477 aa3.88□□□□□ -1.79
PTCD3-219ENST00000494323 SYNJ2BPP57105 145 aa3.88□□□□□ -1.79
PTCD3-219ENST00000494323 DEFA5Q01523 94 aa3.88□□□□□ -1.79
PTCD3-219ENST00000494323 RAB40BQ12829 278 aa3.88□□□□□ -1.79
PTCD3-219ENST00000494323 RIPK1Q13546 671 aa3.88□□□□□ -1.79
PTCD3-219ENST00000494323 KLF5Q13887 457 aaPredicted RBP3.88□□□□□ -1.79
PTCD3-219ENST00000494323 GPR176Q14439 515 aa3.88□□□□□ -1.79
PTCD3-219ENST00000494323 OPCMLQ14982 345 aa3.88□□□□□ -1.79
PTCD3-219ENST00000494323 AKIRIN2Q53H80 203 aa3.88□□□□□ -1.79
PTCD3-219ENST00000494323 ETFRF1Q6IPR1 90 aa3.88□□□□□ -1.79
PTCD3-219ENST00000494323 RPL22L1Q6P5R6 122 aaKnown RBP3.88□□□□□ -1.79
PTCD3-219ENST00000494323 CD200R1LQ6Q8B3 271 aa3.88□□□□□ -1.79
PTCD3-219ENST00000494323 FAM131AQ6UXB0 335 aa3.88□□□□□ -1.79
PTCD3-219ENST00000494323 ZNF833PQ6ZTB9 187 aa3.88□□□□□ -1.79
PTCD3-219ENST00000494323 TRPT1Q86TN4 253 aaKnown RBP3.88□□□□□ -1.79
PTCD3-219ENST00000494323 LYPD6Q86Y78 171 aa3.88□□□□□ -1.79
PTCD3-219ENST00000494323 GAPTQ8N292 157 aa3.88□□□□□ -1.79
PTCD3-219ENST00000494323 JAGN1Q8N5M9 183 aa3.88□□□□□ -1.79
PTCD3-219ENST00000494323 ZFP41Q8N8Y5 198 aa3.88□□□□□ -1.79
PTCD3-219ENST00000494323 DRAXINQ8NBI3 349 aaPredicted RBP3.88□□□□□ -1.79
PTCD3-219ENST00000494323 RHOXF1Q8NHV9 184 aa3.88□□□□□ -1.79
PTCD3-219ENST00000494323 MRPL30Q8TCC3 161 aaKnown RBP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms