RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 KBTBD11O94819 623 aa9.12□□□□□ -0.95
MCF2L-231ENST00000494043 NDUFA3O95167 84 aa9.12□□□□□ -0.95
MCF2L-231ENST00000494043 IL6RP08887 468 aaPredicted RBP9.12□□□□□ -0.95
MCF2L-231ENST00000494043 OR9G9P0C7N8 305 aa9.12□□□□□ -0.95
MCF2L-231ENST00000494043 CYCSP99999 105 aaKnown RBP9.12□□□□□ -0.95
MCF2L-231ENST00000494043 PSG5Q15238 335 aa9.12□□□□□ -0.95
MCF2L-231ENST00000494043 MMDQ15546 238 aa9.12□□□□□ -0.95
MCF2L-231ENST00000494043 CLEC9AQ6UXN8 241 aa9.12□□□□□ -0.95
MCF2L-231ENST00000494043 NPBQ8NG41 125 aa9.12□□□□□ -0.95
MCF2L-231ENST00000494043 OR4D5Q8NGN0 318 aa9.12□□□□□ -0.95
MCF2L-231ENST00000494043 OR4A5Q8NH83 315 aa9.12□□□□□ -0.95
MCF2L-231ENST00000494043 OR1S1Q8NH92 325 aa9.12□□□□□ -0.95
MCF2L-231ENST00000494043 VSTM2AQ8TAG5 236 aa9.12□□□□□ -0.95
MCF2L-231ENST00000494043 TMEM167AQ8TBQ9 72 aa9.12□□□□□ -0.95
MCF2L-231ENST00000494043 NMES1Q9C002 83 aa9.12□□□□□ -0.95
MCF2L-231ENST00000494043 GSKIPQ9P0R6 139 aa9.12□□□□□ -0.95
MCF2L-231ENST00000494043 BOLA1Q9Y3E2 137 aa9.12□□□□□ -0.95
MCF2L-231ENST00000494043 TRAV3A0A0B4J244 114 aa9.11□□□□□ -0.95
MCF2L-231ENST00000494043 C15orf61A6NNL5 157 aa9.11□□□□□ -0.95
MCF2L-231ENST00000494043 H3BUX3 64 aa9.11□□□□□ -0.95
MCF2L-231ENST00000494043 UPK2O00526 184 aa9.11□□□□□ -0.95
MCF2L-231ENST00000494043 RRHO14718 337 aa9.11□□□□□ -0.95
MCF2L-231ENST00000494043 CRYGBP07316 175 aa9.11□□□□□ -0.95
MCF2L-231ENST00000494043 F2RL1P55085 397 aa9.11□□□□□ -0.95
MCF2L-231ENST00000494043 OR2B8PP59922 312 aa9.11□□□□□ -0.95
MCF2L-231ENST00000494043 RELBQ01201 579 aa9.11□□□□□ -0.95
MCF2L-231ENST00000494043 CD300CQ08708 224 aa9.11□□□□□ -0.95
MCF2L-231ENST00000494043 IL15RAQ13261 267 aa9.11□□□□□ -0.95
MCF2L-231ENST00000494043 TUSC1Q2TAM9 212 aa9.11□□□□□ -0.95
MCF2L-231ENST00000494043 FOXRED2Q8IWF2 684 aa9.11□□□□□ -0.95
MCF2L-231ENST00000494043 TCTE3Q8IZS6 198 aa9.11□□□□□ -0.95
MCF2L-231ENST00000494043 TEX45Q8NA69 505 aa9.11□□□□□ -0.95
MCF2L-231ENST00000494043 OR8H1Q8NGG4 311 aa9.11□□□□□ -0.95
MCF2L-231ENST00000494043 OR4A16Q8NH70 328 aa9.11□□□□□ -0.95
MCF2L-231ENST00000494043 ZNF48Q96MX3 618 aaPredicted RBP9.11□□□□□ -0.95
MCF2L-231ENST00000494043 FYTTD1Q96QD9 318 aaKnown RBP9.11□□□□□ -0.95
MCF2L-231ENST00000494043 PRDM13Q9H4Q3 707 aa9.11□□□□□ -0.95
MCF2L-231ENST00000494043 TPSG1Q9NRR2 321 aa9.11□□□□□ -0.95
MCF2L-231ENST00000494043 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.11□□□□□ -0.95
MCF2L-231ENST00000494043 METTL1Q9UBP6 276 aaKnown RBP9.11□□□□□ -0.95
MCF2L-231ENST00000494043 TCF19Q9Y242 345 aa9.11□□□□□ -0.95
MCF2L-231ENST00000494043 NSG2Q9Y328 171 aa9.11□□□□□ -0.95
MCF2L-231ENST00000494043 SONP18583 2426 aaKnown RBP9.11□□□□□ -0.95
MCF2L-231ENST00000494043 NAV3Q8IVL0 2385 aa9.1□□□□□ -0.95
MCF2L-231ENST00000494043 A6NDX4 124 aa9.1□□□□□ -0.95
MCF2L-231ENST00000494043 SNAPC5O75971 98 aa9.1□□□□□ -0.95
MCF2L-231ENST00000494043 SCGB1D2O95969 90 aa9.1□□□□□ -0.95
MCF2L-231ENST00000494043 AARDQ4LEZ3 155 aa9.1□□□□□ -0.95
MCF2L-231ENST00000494043 OR2T35Q8NGX2 323 aa9.1□□□□□ -0.95
MCF2L-231ENST00000494043 PPP1R1CQ8WVI7 109 aa9.1□□□□□ -0.95
MCF2L-231ENST00000494043 ZDHHC16Q969W1 377 aa9.1□□□□□ -0.95
MCF2L-231ENST00000494043 QTRT1Q9BXR0 403 aaKnown RBP9.1□□□□□ -0.95
MCF2L-231ENST00000494043 FBXL15Q9H469 300 aa9.1□□□□□ -0.95
MCF2L-231ENST00000494043 PLSCR3Q9NRY6 295 aa9.1□□□□□ -0.95
MCF2L-231ENST00000494043 TMEM14BQ9NUH8 114 aa9.1□□□□□ -0.95
MCF2L-231ENST00000494043 C1RLQ9NZP8 487 aa9.1□□□□□ -0.95
MCF2L-231ENST00000494043 KIAA1456Q9P272 454 aa9.1□□□□□ -0.95
MCF2L-231ENST00000494043 PRNDQ9UKY0 176 aa9.1□□□□□ -0.95
MCF2L-231ENST00000494043 FOXA2Q9Y261 457 aaPredicted RBP9.1□□□□□ -0.95
MCF2L-231ENST00000494043 SIGLEC9Q9Y336 463 aa9.1□□□□□ -0.95
MCF2L-231ENST00000494043 NCBP2LA6PVI3 153 aaKnown RBP9.09□□□□□ -0.95
MCF2L-231ENST00000494043 FAM90A26D6RGX4 464 aa9.09□□□□□ -0.95
MCF2L-231ENST00000494043 SMLR1H3BR10 107 aa9.09□□□□□ -0.95
MCF2L-231ENST00000494043 ST8SIA3O43173 380 aa9.09□□□□□ -0.95
MCF2L-231ENST00000494043 RBMXL2O75526 392 aaKnown RBP9.09□□□□□ -0.95
MCF2L-231ENST00000494043 OR2F2O95006 317 aa9.09□□□□□ -0.95
MCF2L-231ENST00000494043 NXPH3O95157 252 aa9.09□□□□□ -0.95
MCF2L-231ENST00000494043 IGHV4-59P01825 116 aa9.09□□□□□ -0.95
MCF2L-231ENST00000494043 MBPP02686 304 aaPredicted RBP9.09□□□□□ -0.95
MCF2L-231ENST00000494043 FGF2P09038 288 aa9.09□□□□□ -0.95
MCF2L-231ENST00000494043 NKX2-1P43699 371 aaPredicted RBP9.09□□□□□ -0.95
MCF2L-231ENST00000494043 IER3P46695 156 aa9.09□□□□□ -0.95
MCF2L-231ENST00000494043 S100A10P60903 97 aa9.09□□□□□ -0.95
MCF2L-231ENST00000494043 RPL8P62917 257 aaKnown RBP9.09□□□□□ -0.95
MCF2L-231ENST00000494043 SCGB2A2Q13296 93 aa9.09□□□□□ -0.95
MCF2L-231ENST00000494043 PLGLAQ15195 96 aa9.09□□□□□ -0.95
MCF2L-231ENST00000494043 PRSS8Q16651 343 aa9.09□□□□□ -0.95
MCF2L-231ENST00000494043 C5orf64Q2M2E5 130 aa9.09□□□□□ -0.95
MCF2L-231ENST00000494043 MRGPRG-AS1Q2M3A8 158 aa9.09□□□□□ -0.95
MCF2L-231ENST00000494043 CXorf66Q5JRM2 361 aaPredicted RBP9.09□□□□□ -0.95
MCF2L-231ENST00000494043 Q6YL49 198 aa9.09□□□□□ -0.95
MCF2L-231ENST00000494043 ZNF429Q86V71 674 aa9.09□□□□□ -0.95
MCF2L-231ENST00000494043 PPP1R27Q86WC6 154 aa9.09□□□□□ -0.95
MCF2L-231ENST00000494043 TMEM219Q86XT9 240 aa9.09□□□□□ -0.95
MCF2L-231ENST00000494043 MMD2Q8IY49 270 aa9.09□□□□□ -0.95
MCF2L-231ENST00000494043 FAM71E2Q8N5Q1 922 aa9.09□□□□□ -0.95
MCF2L-231ENST00000494043 OR5R1Q8NH85 324 aa9.09□□□□□ -0.95
MCF2L-231ENST00000494043 RBM14Q96PK6 669 aaKnown RBP9.09□□□□□ -0.95
MCF2L-231ENST00000494043 SLC25A33Q9BSK2 321 aa9.09□□□□□ -0.95
MCF2L-231ENST00000494043 GSX1Q9H4S2 264 aaPredicted RBP9.09□□□□□ -0.95
MCF2L-231ENST00000494043 ZNF430Q9H8G1 570 aaPredicted RBP9.09□□□□□ -0.95
MCF2L-231ENST00000494043 HSPB7Q9UBY9 170 aa9.09□□□□□ -0.95
MCF2L-231ENST00000494043 CDC42EP3Q9UKI2 254 aa9.09□□□□□ -0.95
MCF2L-231ENST00000494043 POMT1Q9Y6A1 747 aa9.09□□□□□ -0.95
MCF2L-231ENST00000494043 HIVEP2P31629 2446 aa9.09□□□□□ -0.96
MCF2L-231ENST00000494043 TRAV14DV4A0A0A6YYC5 116 aa9.08□□□□□ -0.96
MCF2L-231ENST00000494043 G3V3Q6 166 aa9.08□□□□□ -0.96
MCF2L-231ENST00000494043 K7EPK0 472 aa9.08□□□□□ -0.96
MCF2L-231ENST00000494043 MPC2O95563 127 aa9.08□□□□□ -0.96
MCF2L-231ENST00000494043 PSMB6P28072 239 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms