RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 LY6HO94772 140 aa8.67□□□□□ -1.02
CLCN6-208ENST00000494028 HRASP01112 189 aa8.67□□□□□ -1.02
CLCN6-208ENST00000494028 IGKV1-16P04430 117 aa8.67□□□□□ -1.02
CLCN6-208ENST00000494028 MYOD1P15172 320 aa8.67□□□□□ -1.02
CLCN6-208ENST00000494028 AGAP20933 346 aa8.67□□□□□ -1.02
CLCN6-208ENST00000494028 DEFA5Q01523 94 aa8.67□□□□□ -1.02
CLCN6-208ENST00000494028 ZNF726P1Q15940 193 aa8.67□□□□□ -1.02
CLCN6-208ENST00000494028 GUK1Q16774 197 aa8.67□□□□□ -1.02
CLCN6-208ENST00000494028 SSX7Q7RTT5 188 aa8.67□□□□□ -1.02
CLCN6-208ENST00000494028 OR8B3Q8NGG8 313 aa8.67□□□□□ -1.02
CLCN6-208ENST00000494028 OR5AN1Q8NGI8 311 aa8.67□□□□□ -1.02
CLCN6-208ENST00000494028 OR9G1Q8NH87 305 aa8.67□□□□□ -1.02
CLCN6-208ENST00000494028 TMEM170AQ8WVE7 144 aa8.67□□□□□ -1.02
CLCN6-208ENST00000494028 NEIL1Q96FI4 390 aaPredicted RBP8.67□□□□□ -1.02
CLCN6-208ENST00000494028 OR8B2Q96RD0 313 aa8.67□□□□□ -1.02
CLCN6-208ENST00000494028 NKX6-2Q9C056 277 aaPredicted RBP8.67□□□□□ -1.02
CLCN6-208ENST00000494028 RAB1BQ9H0U4 201 aa8.67□□□□□ -1.02
CLCN6-208ENST00000494028 TMEM133Q9H2Q1 129 aa8.67□□□□□ -1.02
CLCN6-208ENST00000494028 VSIRQ9H7M9 311 aa8.67□□□□□ -1.02
CLCN6-208ENST00000494028 KIAA1456Q9P272 454 aa8.67□□□□□ -1.02
CLCN6-208ENST00000494028 TMA7Q9Y2S6 64 aaKnown RBP8.67□□□□□ -1.02
CLCN6-208ENST00000494028 FAM208BQ5VWN6 2430 aa8.66□□□□□ -1.02
CLCN6-208ENST00000494028 BTBD17A6NE02 478 aa8.66□□□□□ -1.02
CLCN6-208ENST00000494028 C22orf46C9J442 243 aa8.66□□□□□ -1.02
CLCN6-208ENST00000494028 UPK2O00526 184 aa8.66□□□□□ -1.02
CLCN6-208ENST00000494028 RBP4P02753 201 aa8.66□□□□□ -1.02
CLCN6-208ENST00000494028 H2AFB1P0C5Y9 115 aa8.66□□□□□ -1.02
CLCN6-208ENST00000494028 IGFBP2P18065 325 aa8.66□□□□□ -1.02
CLCN6-208ENST00000494028 MDKP21741 143 aaPredicted RBP8.66□□□□□ -1.02
CLCN6-208ENST00000494028 FGF7P21781 194 aa8.66□□□□□ -1.02
CLCN6-208ENST00000494028 REG1BP48304 166 aa8.66□□□□□ -1.02
CLCN6-208ENST00000494028 PPT1P50897 306 aa8.66□□□□□ -1.02
CLCN6-208ENST00000494028 ELLP55199 621 aaPredicted RBP8.66□□□□□ -1.02
CLCN6-208ENST00000494028 GNB2P62879 340 aa8.66□□□□□ -1.02
CLCN6-208ENST00000494028 DIAPH2-AS1Q14236 149 aa8.66□□□□□ -1.02
CLCN6-208ENST00000494028 TMEM177Q53S58 311 aa8.66□□□□□ -1.02
CLCN6-208ENST00000494028 TMEM41BQ5BJD5 291 aa8.66□□□□□ -1.02
CLCN6-208ENST00000494028 WDR25Q64LD2 544 aaPredicted RBP8.66□□□□□ -1.02
CLCN6-208ENST00000494028 ACSM6Q6P461 480 aa8.66□□□□□ -1.02
CLCN6-208ENST00000494028 CENPVQ7Z7K6 275 aaPredicted RBP8.66□□□□□ -1.02
CLCN6-208ENST00000494028 PDPNQ86YL7 162 aa8.66□□□□□ -1.02
CLCN6-208ENST00000494028 SVBPQ8N300 66 aa8.66□□□□□ -1.02
CLCN6-208ENST00000494028 OR10P1Q8NGE3 313 aa8.66□□□□□ -1.02
CLCN6-208ENST00000494028 OR10X1Q8NGY0 326 aa8.66□□□□□ -1.02
CLCN6-208ENST00000494028 NEU4Q8WWR8 484 aaPredicted RBP8.66□□□□□ -1.02
CLCN6-208ENST00000494028 RCC1LQ96I51 464 aaKnown RBP8.66□□□□□ -1.02
CLCN6-208ENST00000494028 HARBI1Q96MB7 349 aa8.66□□□□□ -1.02
CLCN6-208ENST00000494028 CLCC1Q96S66 551 aa8.66□□□□□ -1.02
CLCN6-208ENST00000494028 BET1LQ9NYM9 111 aa8.66□□□□□ -1.02
CLCN6-208ENST00000494028 PRNDQ9UKY0 176 aa8.66□□□□□ -1.02
CLCN6-208ENST00000494028 WDR83OSQ9Y284 106 aa8.66□□□□□ -1.02
CLCN6-208ENST00000494028 SMG1Q96Q15 3661 aaKnown RBP8.66□□□□□ -1.02
CLCN6-208ENST00000494028 IGHV2-26A0A0B4J1V2 119 aa8.65□□□□□ -1.02
CLCN6-208ENST00000494028 TRAV1-1A0A0B4J248 108 aa8.65□□□□□ -1.02
CLCN6-208ENST00000494028 FAM74A7A6NL05 159 aa8.65□□□□□ -1.02
CLCN6-208ENST00000494028 SRRM4A7MD48 611 aaKnown RBP8.65□□□□□ -1.02
CLCN6-208ENST00000494028 DNASE2O00115 360 aaPredicted RBP8.65□□□□□ -1.02
CLCN6-208ENST00000494028 F12P00748 615 aaPredicted RBP8.65□□□□□ -1.02
CLCN6-208ENST00000494028 IGKV1D-33P01593 117 aa8.65□□□□□ -1.02
CLCN6-208ENST00000494028 IGKV1-33P01594 117 aa8.65□□□□□ -1.02
CLCN6-208ENST00000494028 HBE1P02100 147 aa8.65□□□□□ -1.02
CLCN6-208ENST00000494028 M6PRP20645 277 aa8.65□□□□□ -1.02
CLCN6-208ENST00000494028 NPY1RP25929 384 aa8.65□□□□□ -1.02
CLCN6-208ENST00000494028 IL3RAP26951 378 aa8.65□□□□□ -1.02
CLCN6-208ENST00000494028 RAB2AP61019 212 aa8.65□□□□□ -1.02
CLCN6-208ENST00000494028 CCL20P78556 96 aa8.65□□□□□ -1.02
CLCN6-208ENST00000494028 DLK1P80370 383 aa8.65□□□□□ -1.02
CLCN6-208ENST00000494028 PRCDQ00LT1 54 aa8.65□□□□□ -1.02
CLCN6-208ENST00000494028 TAGLNQ01995 201 aaKnown RBP8.65□□□□□ -1.02
CLCN6-208ENST00000494028 BTN1A1Q13410 526 aa8.65□□□□□ -1.02
CLCN6-208ENST00000494028 HLA-DRB5Q30154 266 aa8.65□□□□□ -1.02
CLCN6-208ENST00000494028 FAM74A3Q4VXF1 159 aa8.65□□□□□ -1.02
CLCN6-208ENST00000494028 ZNF843Q8N446 348 aa8.65□□□□□ -1.02
CLCN6-208ENST00000494028 Q8N7P7 452 aa8.65□□□□□ -1.02
CLCN6-208ENST00000494028 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.65□□□□□ -1.02
CLCN6-208ENST00000494028 SLC24A4Q8NFF2 622 aa8.65□□□□□ -1.02
CLCN6-208ENST00000494028 OSR1Q8TAX0 266 aaPredicted RBP8.65□□□□□ -1.02
CLCN6-208ENST00000494028 TNFRSF14Q92956 283 aa8.65□□□□□ -1.02
CLCN6-208ENST00000494028 TMEM186Q96B77 213 aa8.65□□□□□ -1.02
CLCN6-208ENST00000494028 PCGF1Q9BSM1 259 aa8.65□□□□□ -1.02
CLCN6-208ENST00000494028 PBDC1Q9BVG4 233 aa8.65□□□□□ -1.02
CLCN6-208ENST00000494028 RPRMQ9NS64 109 aa8.65□□□□□ -1.02
CLCN6-208ENST00000494028 MIOXQ9UGB7 285 aa8.65□□□□□ -1.02
CLCN6-208ENST00000494028 ZNF257Q9Y2Q1 563 aa8.65□□□□□ -1.02
CLCN6-208ENST00000494028 KPTNQ9Y664 436 aa8.65□□□□□ -1.02
CLCN6-208ENST00000494028 ABCA4P78363 2273 aa8.64□□□□□ -1.03
CLCN6-208ENST00000494028 A6NNC1 897 aa8.64□□□□□ -1.03
CLCN6-208ENST00000494028 RRHO14718 337 aa8.64□□□□□ -1.03
CLCN6-208ENST00000494028 KBTBD11O94819 623 aa8.64□□□□□ -1.03
CLCN6-208ENST00000494028 IFNA10P01566 189 aa8.64□□□□□ -1.03
CLCN6-208ENST00000494028 NPBWR1P48145 328 aa8.64□□□□□ -1.03
CLCN6-208ENST00000494028 RAB13P51153 203 aa8.64□□□□□ -1.03
CLCN6-208ENST00000494028 DLX1P56177 255 aa8.64□□□□□ -1.03
CLCN6-208ENST00000494028 HSPE1P61604 102 aaKnown RBP8.64□□□□□ -1.03
CLCN6-208ENST00000494028 SERF2P84101 59 aa8.64□□□□□ -1.03
CLCN6-208ENST00000494028 TLE4Q04727 773 aa8.64□□□□□ -1.03
CLCN6-208ENST00000494028 PEA15Q15121 130 aa8.64□□□□□ -1.03
CLCN6-208ENST00000494028 ZNF506Q5JVG8 444 aa8.64□□□□□ -1.03
CLCN6-208ENST00000494028 ZNF787Q6DD87 383 aa8.64□□□□□ -1.03
CLCN6-208ENST00000494028 ETV3LQ6ZN32 361 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms