RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 ZNF142P52746 1687 aaPredicted RBP6.72□□□□□ -1.33
BRCA1-221ENST00000493795 IGHV3-66A0A0C4DH42 116 aa6.72□□□□□ -1.33
BRCA1-221ENST00000493795 SRSF1Q07955 248 aaKnown RBP eCLIP6.72□□□□□ -1.33
BRCA1-221ENST00000493795 NUMA1Q14980 2115 aa6.72□□□□□ -1.33
BRCA1-221ENST00000493795 GAGE13Q4V321 117 aa6.72□□□□□ -1.33
BRCA1-221ENST00000493795 FAM214BQ7L5A3 538 aa6.72□□□□□ -1.33
BRCA1-221ENST00000493795 SAXO1Q8IYX7 474 aa6.72□□□□□ -1.33
BRCA1-221ENST00000493795 CCL19Q99731 98 aa6.72□□□□□ -1.33
BRCA1-221ENST00000493795 MYH9P35579 1960 aaKnown RBP6.72□□□□□ -1.33
BRCA1-221ENST00000493795 UPK3AO75631 287 aa6.72□□□□□ -1.33
BRCA1-221ENST00000493795 LINC00158P58513 81 aa6.72□□□□□ -1.33
BRCA1-221ENST00000493795 C1QTNF12Q5T7M4 302 aa6.72□□□□□ -1.33
BRCA1-221ENST00000493795 PNKDQ8N490 385 aa6.72□□□□□ -1.33
BRCA1-221ENST00000493795 LINC01465Q8N7H1 131 aa6.72□□□□□ -1.33
BRCA1-221ENST00000493795 GATD1Q8NB37 220 aa6.72□□□□□ -1.33
BRCA1-221ENST00000493795 VKORC1Q9BQB6 163 aa6.72□□□□□ -1.33
BRCA1-221ENST00000493795 CHTOPQ9Y3Y2 248 aaKnown RBP6.72□□□□□ -1.33
BRCA1-221ENST00000493795 TNFRSF6BO95407 300 aa6.72□□□□□ -1.33
BRCA1-221ENST00000493795 CELA2BP08218 269 aaPredicted RBP6.72□□□□□ -1.33
BRCA1-221ENST00000493795 NBEAP1P0C6P0 100 aa6.72□□□□□ -1.33
BRCA1-221ENST00000493795 WNT2BQ93097 391 aa6.72□□□□□ -1.33
BRCA1-221ENST00000493795 OVOL2Q9BRP0 275 aa6.72□□□□□ -1.33
BRCA1-221ENST00000493795 DLL3Q9NYJ7 618 aa6.72□□□□□ -1.33
BRCA1-221ENST00000493795 ERG28Q9UKR5 140 aa6.72□□□□□ -1.33
BRCA1-221ENST00000493795 CITO14578 2027 aa6.72□□□□□ -1.33
BRCA1-221ENST00000493795 IGHV3-23P01764 117 aa6.71□□□□□ -1.33
BRCA1-221ENST00000493795 CD28P10747 220 aa6.71□□□□□ -1.33
BRCA1-221ENST00000493795 ATP5J2P56134 94 aa6.71□□□□□ -1.33
BRCA1-221ENST00000493795 LHFPL4Q7Z7J7 247 aa6.71□□□□□ -1.33
BRCA1-221ENST00000493795 AQP3Q92482 292 aa6.71□□□□□ -1.33
BRCA1-221ENST00000493795 KLHDC2Q9Y2U9 406 aa6.71□□□□□ -1.33
BRCA1-221ENST00000493795 PRR33A8MZF0 331 aa6.71□□□□□ -1.33
BRCA1-221ENST00000493795 PTP4A3O75365 173 aa6.71□□□□□ -1.33
BRCA1-221ENST00000493795 FAM60AQ9NP50 221 aa6.71□□□□□ -1.33
BRCA1-221ENST00000493795 GON4LQ3T8J9 2241 aa6.71□□□□□ -1.34
BRCA1-221ENST00000493795 IGHV3OR16-13A0A075B7E8 117 aa6.71□□□□□ -1.34
BRCA1-221ENST00000493795 IGHV3-74A0A0B4J1X5 117 aa6.71□□□□□ -1.34
BRCA1-221ENST00000493795 ZNF826PQ6ZT77 177 aa6.71□□□□□ -1.34
BRCA1-221ENST00000493795 ZNF479Q96JC4 524 aa6.71□□□□□ -1.34
BRCA1-221ENST00000493795 IMMP2LQ96T52 175 aa6.71□□□□□ -1.34
BRCA1-221ENST00000493795 MRPS18AQ9NVS2 196 aaKnown RBP6.71□□□□□ -1.34
BRCA1-221ENST00000493795 AHRRA9YTQ3 701 aa6.71□□□□□ -1.34
BRCA1-221ENST00000493795 KLF4O43474 513 aa6.71□□□□□ -1.34
BRCA1-221ENST00000493795 CCL4P13236 92 aa6.71□□□□□ -1.34
BRCA1-221ENST00000493795 IFI27L2Q9H2X8 130 aa6.71□□□□□ -1.34
BRCA1-221ENST00000493795 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.71□□□□□ -1.34
BRCA1-221ENST00000493795 ADARB2-AS1A8MUL3 147 aa6.71□□□□□ -1.34
BRCA1-221ENST00000493795 ATXN7O15265 892 aaPredicted RBP6.71□□□□□ -1.34
BRCA1-221ENST00000493795 PTGDSP41222 190 aa6.71□□□□□ -1.34
BRCA1-221ENST00000493795 RTN4RL2Q86UN3 420 aa6.71□□□□□ -1.34
BRCA1-221ENST00000493795 NR2C2APQ86WQ0 139 aa6.71□□□□□ -1.34
BRCA1-221ENST00000493795 LOXL4Q96JB6 756 aa6.71□□□□□ -1.34
BRCA1-221ENST00000493795 JMJD8Q96S16 334 aa6.71□□□□□ -1.34
BRCA1-221ENST00000493795 RPRMQ9NS64 109 aa6.71□□□□□ -1.34
BRCA1-221ENST00000493795 FBXL7Q9UJT9 491 aa6.71□□□□□ -1.34
BRCA1-221ENST00000493795 RNF115Q9Y4L5 304 aa6.71□□□□□ -1.34
BRCA1-221ENST00000493795 SIRT4Q9Y6E7 314 aaPredicted RBP6.71□□□□□ -1.34
BRCA1-221ENST00000493795 IGHV3-35A0A0C4DH35 117 aa6.7□□□□□ -1.34
BRCA1-221ENST00000493795 MUC21A0A0G2JKD1 596 aa6.7□□□□□ -1.34
BRCA1-221ENST00000493795 MUC21A0A140T8X8 626 aa6.7□□□□□ -1.34
BRCA1-221ENST00000493795 LINC00587B1AMM8 73 aa6.7□□□□□ -1.34
BRCA1-221ENST00000493795 HOXB1P14653 301 aaPredicted RBP6.7□□□□□ -1.34
BRCA1-221ENST00000493795 TMEM187Q14656 261 aa6.7□□□□□ -1.34
BRCA1-221ENST00000493795 ORMDL2Q53FV1 153 aa6.7□□□□□ -1.34
BRCA1-221ENST00000493795 MUC21Q5SSG8 566 aa6.7□□□□□ -1.34
BRCA1-221ENST00000493795 STHQ8IWL8 128 aa6.7□□□□□ -1.34
BRCA1-221ENST00000493795 GSN-AS1Q9NRJ2 163 aa6.7□□□□□ -1.34
BRCA1-221ENST00000493795 PHLPP1O60346 1717 aa6.7□□□□□ -1.34
BRCA1-221ENST00000493795 IGHV5-10-1A0A0J9YXX1 117 aa6.7□□□□□ -1.34
BRCA1-221ENST00000493795 NTN1O95631 604 aa6.7□□□□□ -1.34
BRCA1-221ENST00000493795 IGKCP01834 107 aa6.7□□□□□ -1.34
BRCA1-221ENST00000493795 CXCL10P02778 98 aa6.7□□□□□ -1.34
BRCA1-221ENST00000493795 NANOS3P60323 173 aaKnown RBP6.7□□□□□ -1.34
BRCA1-221ENST00000493795 SAMD5Q5TGI4 173 aa6.7□□□□□ -1.34
BRCA1-221ENST00000493795 C9orf40Q8IXQ3 194 aa6.7□□□□□ -1.34
BRCA1-221ENST00000493795 COL16A1Q07092 1604 aaPredicted RBP6.7□□□□□ -1.34
BRCA1-221ENST00000493795 PRSS23O95084 383 aa6.7□□□□□ -1.34
BRCA1-221ENST00000493795 CGAP01215 116 aa6.7□□□□□ -1.34
BRCA1-221ENST00000493795 TMPRSS3P57727 454 aa6.7□□□□□ -1.34
BRCA1-221ENST00000493795 LEAP2Q969E1 77 aa6.7□□□□□ -1.34
BRCA1-221ENST00000493795 COX14Q96I36 57 aa6.7□□□□□ -1.34
BRCA1-221ENST00000493795 FOXA2Q9Y261 457 aaPredicted RBP6.7□□□□□ -1.34
BRCA1-221ENST00000493795 IGHV3OR16-10A0A075B7F0 116 aa6.7□□□□□ -1.34
BRCA1-221ENST00000493795 IGHV1-69-2A0A0G2JMI3 117 aa6.7□□□□□ -1.34
BRCA1-221ENST00000493795 TRBV5-5A0A0J9YX44 114 aa6.7□□□□□ -1.34
BRCA1-221ENST00000493795 TMEM238C9JI98 176 aa6.7□□□□□ -1.34
BRCA1-221ENST00000493795 GFRA3O60609 400 aa6.7□□□□□ -1.34
BRCA1-221ENST00000493795 IL11P20809 199 aa6.7□□□□□ -1.34
BRCA1-221ENST00000493795 UBE2DNLQ8IWF7 75 aa6.7□□□□□ -1.34
BRCA1-221ENST00000493795 PLA2G2FQ9BZM2 168 aa6.7□□□□□ -1.34
BRCA1-221ENST00000493795 HSD52Q0P140 79 aa6.69□□□□□ -1.34
BRCA1-221ENST00000493795 RBMY1FQ15415 496 aaKnown RBP6.69□□□□□ -1.34
BRCA1-221ENST00000493795 FAM19A2Q8N3H0 131 aa6.69□□□□□ -1.34
BRCA1-221ENST00000493795 COQ2Q96H96 371 aa6.69□□□□□ -1.34
BRCA1-221ENST00000493795 CROCCQ5TZA2 2017 aa6.69□□□□□ -1.34
BRCA1-221ENST00000493795 IGHV3-49A0A0A0MS15 119 aa6.69□□□□□ -1.34
BRCA1-221ENST00000493795 TRGV4A0A0C4DH28 118 aa6.69□□□□□ -1.34
BRCA1-221ENST00000493795 PROB1E7EW31 1015 aa6.69□□□□□ -1.34
BRCA1-221ENST00000493795 CD7P09564 240 aa6.69□□□□□ -1.34
BRCA1-221ENST00000493795 EGR1P18146 543 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms