RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 SELENOKQ9Y6D0 94 aa11.13□□□□□ -0.63
ATG4B-223ENST00000493618 STAB2Q8WWQ8 2551 aa11.13□□□□□ -0.63
ATG4B-223ENST00000493618 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.12□□□□□ -0.63
ATG4B-223ENST00000493618 A0A1B0GW64 132 aa11.12□□□□□ -0.63
ATG4B-223ENST00000493618 DPPA5A6NC42 116 aa11.12□□□□□ -0.63
ATG4B-223ENST00000493618 HLA-AP01891 365 aaKnown RBP11.12□□□□□ -0.63
ATG4B-223ENST00000493618 REG1AP05451 166 aa11.12□□□□□ -0.63
ATG4B-223ENST00000493618 IL6RP08887 468 aaPredicted RBP11.12□□□□□ -0.63
ATG4B-223ENST00000493618 RPL27AP46776 148 aaKnown RBP11.12□□□□□ -0.63
ATG4B-223ENST00000493618 FXYD4P59646 89 aa11.12□□□□□ -0.63
ATG4B-223ENST00000493618 C15orf32Q32M92 178 aa11.12□□□□□ -0.63
ATG4B-223ENST00000493618 CASC10Q5T4H9 136 aa11.12□□□□□ -0.63
ATG4B-223ENST00000493618 LCN12Q6JVE5 192 aa11.12□□□□□ -0.63
ATG4B-223ENST00000493618 HOGA1Q86XE5 327 aa11.12□□□□□ -0.63
ATG4B-223ENST00000493618 NECAP1Q8NC96 275 aa11.12□□□□□ -0.63
ATG4B-223ENST00000493618 OR13F1Q8NGS4 319 aa11.12□□□□□ -0.63
ATG4B-223ENST00000493618 TMEM167AQ8TBQ9 72 aa11.12□□□□□ -0.63
ATG4B-223ENST00000493618 PEMTQ9UBM1 199 aa11.12□□□□□ -0.63
ATG4B-223ENST00000493618 SULT1C2O00338 296 aa11.11□□□□□ -0.63
ATG4B-223ENST00000493618 PPYP01298 95 aa11.11□□□□□ -0.63
ATG4B-223ENST00000493618 AREGP15514 252 aa11.11□□□□□ -0.63
ATG4B-223ENST00000493618 ADAMTSL5Q6ZMM2 481 aa11.11□□□□□ -0.63
ATG4B-223ENST00000493618 ZNF66Q6ZN08 573 aa11.11□□□□□ -0.63
ATG4B-223ENST00000493618 GTSCR1Q86UQ5 136 aa11.11□□□□□ -0.63
ATG4B-223ENST00000493618 SLC25A42Q86VD7 318 aa11.11□□□□□ -0.63
ATG4B-223ENST00000493618 Q8N402 240 aa11.11□□□□□ -0.63
ATG4B-223ENST00000493618 VSTM2AQ8TAG5 236 aa11.11□□□□□ -0.63
ATG4B-223ENST00000493618 THAP7Q9BT49 309 aaPredicted RBP11.11□□□□□ -0.63
ATG4B-223ENST00000493618 SLC5A7Q9GZV3 580 aa11.11□□□□□ -0.63
ATG4B-223ENST00000493618 AUNIPQ9H7T9 357 aa11.11□□□□□ -0.63
ATG4B-223ENST00000493618 FBXL7Q9UJT9 491 aa11.11□□□□□ -0.63
ATG4B-223ENST00000493618 ZNF257Q9Y2Q1 563 aa11.11□□□□□ -0.63
ATG4B-223ENST00000493618 A8MZ25 164 aa11.1□□□□□ -0.63
ATG4B-223ENST00000493618 NDUFB8O95169 186 aa11.1□□□□□ -0.63
ATG4B-223ENST00000493618 HRASP01112 189 aa11.1□□□□□ -0.63
ATG4B-223ENST00000493618 ZNF735P0CB33 412 aa11.1□□□□□ -0.63
ATG4B-223ENST00000493618 SCAND1P57086 179 aa11.1□□□□□ -0.63
ATG4B-223ENST00000493618 ZFAND6Q6FIF0 208 aa11.1□□□□□ -0.63
ATG4B-223ENST00000493618 OR4A47Q6IF82 309 aa11.1□□□□□ -0.63
ATG4B-223ENST00000493618 SPAG16Q8N0X2 631 aa11.1□□□□□ -0.63
ATG4B-223ENST00000493618 TUBA4BQ9H853 241 aa11.1□□□□□ -0.63
ATG4B-223ENST00000493618 PLEKHA3Q9HB20 300 aa11.1□□□□□ -0.63
ATG4B-223ENST00000493618 DIABLOQ9NR28 239 aa11.1□□□□□ -0.63
ATG4B-223ENST00000493618 GAR1Q9NY12 217 aaKnown RBP11.1□□□□□ -0.63
ATG4B-223ENST00000493618 SIGLEC8Q9NYZ4 499 aa11.1□□□□□ -0.63
ATG4B-223ENST00000493618 DMRT1Q9Y5R6 373 aa11.1□□□□□ -0.63
ATG4B-223ENST00000493618 SACSQ9NZJ4 4579 aa11.09□□□□□ -0.63
ATG4B-223ENST00000493618 NPIPB5A8MRT5 1133 aa11.09□□□□□ -0.63
ATG4B-223ENST00000493618 OR2C1O95371 312 aa11.09□□□□□ -0.63
ATG4B-223ENST00000493618 LYL1P12980 280 aa11.09□□□□□ -0.63
ATG4B-223ENST00000493618 RPA2P15927 270 aa11.09□□□□□ -0.63
ATG4B-223ENST00000493618 MAS1LP35410 378 aa11.09□□□□□ -0.63
ATG4B-223ENST00000493618 KIR2DS2P43631 304 aa11.09□□□□□ -0.63
ATG4B-223ENST00000493618 MECP2P51608 486 aaKnown RBP11.09□□□□□ -0.63
ATG4B-223ENST00000493618 LSM3P62310 102 aaKnown RBP11.09□□□□□ -0.63
ATG4B-223ENST00000493618 HAGHQ16775 308 aa11.09□□□□□ -0.63
ATG4B-223ENST00000493618 TIMM50Q3ZCQ8 353 aa11.09□□□□□ -0.63
ATG4B-223ENST00000493618 CD300EQ496F6 205 aaPredicted RBP11.09□□□□□ -0.63
ATG4B-223ENST00000493618 CLEC19AQ6UXS0 136 aa11.09□□□□□ -0.63
ATG4B-223ENST00000493618 TMEM17Q86X19 198 aa11.09□□□□□ -0.63
ATG4B-223ENST00000493618 DYNLRB2Q8TF09 96 aa11.09□□□□□ -0.63
ATG4B-223ENST00000493618 FANCD2OSQ96PS1 177 aa11.09□□□□□ -0.63
ATG4B-223ENST00000493618 HRASLSQ9HDD0 168 aa11.09□□□□□ -0.63
ATG4B-223ENST00000493618 PALMDQ9NP74 551 aa11.09□□□□□ -0.63
ATG4B-223ENST00000493618 SLC2A9Q9NRM0 540 aa11.09□□□□□ -0.63
ATG4B-223ENST00000493618 RYR2Q92736 4967 aa11.09□□□□□ -0.63
ATG4B-223ENST00000493618 STARD9Q9P2P6 4700 aa11.09□□□□□ -0.63
ATG4B-223ENST00000493618 A0A0A6YYH2 397 aa11.08□□□□□ -0.64
ATG4B-223ENST00000493618 TRAV3A0A0B4J244 114 aa11.08□□□□□ -0.64
ATG4B-223ENST00000493618 A6NJ64 397 aa11.08□□□□□ -0.64
ATG4B-223ENST00000493618 CGB1A6NKQ9 187 aa11.08□□□□□ -0.64
ATG4B-223ENST00000493618 AIREO43918 545 aa11.08□□□□□ -0.64
ATG4B-223ENST00000493618 GGCTO75223 188 aaKnown RBP11.08□□□□□ -0.64
ATG4B-223ENST00000493618 HLA-GP17693 338 aa11.08□□□□□ -0.64
ATG4B-223ENST00000493618 PSMB6P28072 239 aa11.08□□□□□ -0.64
ATG4B-223ENST00000493618 CD81P60033 236 aa11.08□□□□□ -0.64
ATG4B-223ENST00000493618 RPL8P62917 257 aaKnown RBP11.08□□□□□ -0.64
ATG4B-223ENST00000493618 KCTD21Q4G0X4 260 aa11.08□□□□□ -0.64
ATG4B-223ENST00000493618 ZNF818PQ6ZRF7 136 aa11.08□□□□□ -0.64
ATG4B-223ENST00000493618 OR51H1Q8NH63 302 aa11.08□□□□□ -0.64
ATG4B-223ENST00000493618 CACNG8Q8WXS5 425 aa11.08□□□□□ -0.64
ATG4B-223ENST00000493618 KCTD12Q96CX2 325 aaKnown RBP11.08□□□□□ -0.64
ATG4B-223ENST00000493618 CCDC140Q96MF4 163 aa11.08□□□□□ -0.64
ATG4B-223ENST00000493618 CITED4Q96RK1 184 aa11.08□□□□□ -0.64
ATG4B-223ENST00000493618 RETNQ9HD89 108 aa11.08□□□□□ -0.64
ATG4B-223ENST00000493618 IFT46Q9NQC8 304 aa11.08□□□□□ -0.64
ATG4B-223ENST00000493618 ZC4H2Q9NQZ6 224 aa11.08□□□□□ -0.64
ATG4B-223ENST00000493618 CSMD3Q7Z407 3707 aa11.07□□□□□ -0.64
ATG4B-223ENST00000493618 C2orf70A6NJV1 201 aa11.07□□□□□ -0.64
ATG4B-223ENST00000493618 FOLR2P14207 255 aa11.07□□□□□ -0.64
ATG4B-223ENST00000493618 ARL3P36405 182 aa11.07□□□□□ -0.64
ATG4B-223ENST00000493618 GUCA2BQ16661 112 aa11.07□□□□□ -0.64
ATG4B-223ENST00000493618 OR5AP2Q8NGF4 316 aa11.07□□□□□ -0.64
ATG4B-223ENST00000493618 LYSTQ99698 3801 aa11.07□□□□□ -0.64
ATG4B-223ENST00000493618 NEURL2Q9BR09 285 aa11.07□□□□□ -0.64
ATG4B-223ENST00000493618 SPATA25Q9BR10 227 aa11.07□□□□□ -0.64
ATG4B-223ENST00000493618 WFDC10AQ9H1F0 79 aa11.07□□□□□ -0.64
ATG4B-223ENST00000493618 BET1LQ9NYM9 111 aa11.07□□□□□ -0.64
ATG4B-223ENST00000493618 EHFQ9NZC4 300 aa11.07□□□□□ -0.64
ATG4B-223ENST00000493618 MFSD2BA6NFX1 497 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms