RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 VSTM2AQ8TAG5 236 aa8.22□□□□□ -1.09
PRPF3-206ENST00000493553 LINC01560Q8TB33 94 aa8.22□□□□□ -1.09
PRPF3-206ENST00000493553 DDB2Q92466 427 aa8.22□□□□□ -1.09
PRPF3-206ENST00000493553 NEIL1Q96FI4 390 aaPredicted RBP8.22□□□□□ -1.09
PRPF3-206ENST00000493553 PCGF1Q9BSM1 259 aa8.22□□□□□ -1.09
PRPF3-206ENST00000493553 UQCC1Q9NVA1 299 aa8.22□□□□□ -1.09
PRPF3-206ENST00000493553 CARHSP1Q9Y2V2 147 aaKnown RBP8.22□□□□□ -1.09
PRPF3-206ENST00000493553 KPTNQ9Y664 436 aa8.22□□□□□ -1.09
PRPF3-206ENST00000493553 SAA2-SAA4A0A096LPE2 208 aa8.21□□□□□ -1.1
PRPF3-206ENST00000493553 FNDC10F2Z333 226 aa8.21□□□□□ -1.1
PRPF3-206ENST00000493553 DVL1O14640 695 aa8.21□□□□□ -1.1
PRPF3-206ENST00000493553 PPIHO43447 177 aaKnown RBP8.21□□□□□ -1.1
PRPF3-206ENST00000493553 NDUFS6O75380 124 aaKnown RBP8.21□□□□□ -1.1
PRPF3-206ENST00000493553 APOC3P02656 99 aa8.21□□□□□ -1.1
PRPF3-206ENST00000493553 TFF1P04155 84 aa8.21□□□□□ -1.1
PRPF3-206ENST00000493553 CD5P06127 495 aa8.21□□□□□ -1.1
PRPF3-206ENST00000493553 SAA2P0DJI9 122 aaPredicted RBP8.21□□□□□ -1.1
PRPF3-206ENST00000493553 IAPPP10997 89 aa8.21□□□□□ -1.1
PRPF3-206ENST00000493553 ZNF137PP52743 207 aa8.21□□□□□ -1.1
PRPF3-206ENST00000493553 PRRX1P54821 245 aa8.21□□□□□ -1.1
PRPF3-206ENST00000493553 HSPE1P61604 102 aaKnown RBP8.21□□□□□ -1.1
PRPF3-206ENST00000493553 PMS2P11Q13670 270 aa8.21□□□□□ -1.1
PRPF3-206ENST00000493553 ZNF833PQ6ZTB9 187 aa8.21□□□□□ -1.1
PRPF3-206ENST00000493553 CENPVQ7Z7K6 275 aaPredicted RBP8.21□□□□□ -1.1
PRPF3-206ENST00000493553 OR9G1Q8NH87 305 aa8.21□□□□□ -1.1
PRPF3-206ENST00000493553 FAM213BQ8TBF2 198 aa8.21□□□□□ -1.1
PRPF3-206ENST00000493553 SUN5Q8TC36 379 aa8.21□□□□□ -1.1
PRPF3-206ENST00000493553 H1FXQ92522 213 aaKnown RBP8.21□□□□□ -1.1
PRPF3-206ENST00000493553 C5orf30Q96GV9 206 aa8.21□□□□□ -1.1
PRPF3-206ENST00000493553 LINC00052Q96N35 136 aa8.21□□□□□ -1.1
PRPF3-206ENST00000493553 FOXA2Q9Y261 457 aaPredicted RBP8.21□□□□□ -1.1
PRPF3-206ENST00000493553 AMMECR1Q9Y4X0 333 aaPredicted RBP8.21□□□□□ -1.1
PRPF3-206ENST00000493553 NBASA2RRP1 2371 aa8.21□□□□□ -1.1
PRPF3-206ENST00000493553 CHD8Q9HCK8 2581 aa8.2□□□□□ -1.1
PRPF3-206ENST00000493553 C15orf61A6NNL5 157 aa8.2□□□□□ -1.1
PRPF3-206ENST00000493553 F8W036 122 aa8.2□□□□□ -1.1
PRPF3-206ENST00000493553 IFNA1P01562 189 aa8.2□□□□□ -1.1
PRPF3-206ENST00000493553 METTL15P1P0C7V9 234 aa8.2□□□□□ -1.1
PRPF3-206ENST00000493553 SELLP14151 372 aa8.2□□□□□ -1.1
PRPF3-206ENST00000493553 SNCAP37840 140 aa8.2□□□□□ -1.1
PRPF3-206ENST00000493553 LGALS7P47929 136 aa8.2□□□□□ -1.1
PRPF3-206ENST00000493553 ZNF134P52741 427 aa8.2□□□□□ -1.1
PRPF3-206ENST00000493553 BRWD1-AS2P59051 145 aa8.2□□□□□ -1.1
PRPF3-206ENST00000493553 OR2B8PP59922 312 aa8.2□□□□□ -1.1
PRPF3-206ENST00000493553 RAB31Q13636 194 aa8.2□□□□□ -1.1
PRPF3-206ENST00000493553 RPL39P5Q59GN2 51 aa8.2□□□□□ -1.1
PRPF3-206ENST00000493553 OR2B11Q5JQS5 317 aa8.2□□□□□ -1.1
PRPF3-206ENST00000493553 TMEM182Q6ZP80 229 aaPredicted RBP8.2□□□□□ -1.1
PRPF3-206ENST00000493553 DTX2Q86UW9 622 aa8.2□□□□□ -1.1
PRPF3-206ENST00000493553 THNSL2Q86YJ6 484 aa8.2□□□□□ -1.1
PRPF3-206ENST00000493553 PDPNQ86YL7 162 aa8.2□□□□□ -1.1
PRPF3-206ENST00000493553 OR8B3Q8NGG8 313 aa8.2□□□□□ -1.1
PRPF3-206ENST00000493553 OR10X1Q8NGY0 326 aa8.2□□□□□ -1.1
PRPF3-206ENST00000493553 OR5B3Q8NH48 314 aa8.2□□□□□ -1.1
PRPF3-206ENST00000493553 C8orf46Q8TAG6 207 aa8.2□□□□□ -1.1
PRPF3-206ENST00000493553 BSCL2Q96G97 398 aaPredicted RBP8.2□□□□□ -1.1
PRPF3-206ENST00000493553 OR8B2Q96RD0 313 aa8.2□□□□□ -1.1
PRPF3-206ENST00000493553 HEYLQ9NQ87 328 aaPredicted RBP8.2□□□□□ -1.1
PRPF3-206ENST00000493553 SLC35D1Q9NTN3 355 aa8.2□□□□□ -1.1
PRPF3-206ENST00000493553 TMEM140Q9NV12 185 aa8.2□□□□□ -1.1
PRPF3-206ENST00000493553 KIAA1456Q9P272 454 aa8.2□□□□□ -1.1
PRPF3-206ENST00000493553 PKDREJQ9NTG1 2253 aa8.2□□□□□ -1.1
PRPF3-206ENST00000493553 MGAQ8IWI9 3026 aa8.2□□□□□ -1.1
PRPF3-206ENST00000493553 DYSFO75923 2080 aa8.2□□□□□ -1.1
PRPF3-206ENST00000493553 FREM2Q5SZK8 3169 aa8.2□□□□□ -1.1
PRPF3-206ENST00000493553 H3BP45 60 aa8.19□□□□□ -1.1
PRPF3-206ENST00000493553 H7C2Y5 167 aa8.19□□□□□ -1.1
PRPF3-206ENST00000493553 PROP1O75360 226 aa8.19□□□□□ -1.1
PRPF3-206ENST00000493553 PPT1P50897 306 aa8.19□□□□□ -1.1
PRPF3-206ENST00000493553 DLK1P80370 383 aa8.19□□□□□ -1.1
PRPF3-206ENST00000493553 DEFA5Q01523 94 aa8.19□□□□□ -1.1
PRPF3-206ENST00000493553 TFF3Q07654 80 aa8.19□□□□□ -1.1
PRPF3-206ENST00000493553 TMEM267Q0VDI3 215 aaPredicted RBP8.19□□□□□ -1.1
PRPF3-206ENST00000493553 GUK1Q16774 197 aa8.19□□□□□ -1.1
PRPF3-206ENST00000493553 IZUMO4Q1ZYL8 232 aa8.19□□□□□ -1.1
PRPF3-206ENST00000493553 VWC2Q2TAL6 325 aa8.19□□□□□ -1.1
PRPF3-206ENST00000493553 TMEM177Q53S58 311 aa8.19□□□□□ -1.1
PRPF3-206ENST00000493553 TCF23Q7RTU1 214 aa8.19□□□□□ -1.1
PRPF3-206ENST00000493553 OR5AN1Q8NGI8 311 aa8.19□□□□□ -1.1
PRPF3-206ENST00000493553 MBD3L1Q8WWY6 194 aa8.19□□□□□ -1.1
PRPF3-206ENST00000493553 TAF15Q92804 592 aaKnown RBP eCLIP8.19□□□□□ -1.1
PRPF3-206ENST00000493553 WDR61Q9GZS3 305 aaKnown RBP8.19□□□□□ -1.1
PRPF3-206ENST00000493553 EIF5A2Q9GZV4 153 aaKnown RBP8.19□□□□□ -1.1
PRPF3-206ENST00000493553 TMEM14BQ9NUH8 114 aa8.19□□□□□ -1.1
PRPF3-206ENST00000493553 BET1LQ9NYM9 111 aa8.19□□□□□ -1.1
PRPF3-206ENST00000493553 J3QR06 171 aa8.18□□□□□ -1.1
PRPF3-206ENST00000493553 KBTBD11O94819 623 aa8.18□□□□□ -1.1
PRPF3-206ENST00000493553 IFNA10P01566 189 aa8.18□□□□□ -1.1
PRPF3-206ENST00000493553 IGHV2-70P01814 119 aa8.18□□□□□ -1.1
PRPF3-206ENST00000493553 ARG1P05089 322 aa8.18□□□□□ -1.1
PRPF3-206ENST00000493553 USF1P22415 310 aaPredicted RBP8.18□□□□□ -1.1
PRPF3-206ENST00000493553 LOXP28300 417 aaPredicted RBP8.18□□□□□ -1.1
PRPF3-206ENST00000493553 HOXA1P49639 335 aaPredicted RBP8.18□□□□□ -1.1
PRPF3-206ENST00000493553 HOXA4Q00056 320 aaPredicted RBP8.18□□□□□ -1.1
PRPF3-206ENST00000493553 TMEM41BQ5BJD5 291 aa8.18□□□□□ -1.1
PRPF3-206ENST00000493553 OR8G2PQ6IF36 304 aa8.18□□□□□ -1.1
PRPF3-206ENST00000493553 CLEC9AQ6UXN8 241 aa8.18□□□□□ -1.1
PRPF3-206ENST00000493553 RBMS3Q6XE24 437 aaKnown RBP8.18□□□□□ -1.1
PRPF3-206ENST00000493553 ODF3L1Q8IXM7 274 aa8.18□□□□□ -1.1
PRPF3-206ENST00000493553 ZNF383Q8NA42 475 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms