RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 FAM212BQ9NTI7 297 aaPredicted RBP12.5□□□□□ -0.41
HPS4-216ENST00000493455 LINC00527Q9UJ94 153 aa12.5□□□□□ -0.41
HPS4-216ENST00000493455 RBMXL2O75526 392 aaKnown RBP12.49□□□□□ -0.41
HPS4-216ENST00000493455 ATG12O94817 140 aa12.49□□□□□ -0.41
HPS4-216ENST00000493455 CNIH1O95406 144 aa12.49□□□□□ -0.41
HPS4-216ENST00000493455 IGKV1-5P01602 117 aa12.49□□□□□ -0.41
HPS4-216ENST00000493455 OPN1MWP04001 364 aa12.49□□□□□ -0.41
HPS4-216ENST00000493455 OR9G9P0C7N8 305 aa12.49□□□□□ -0.41
HPS4-216ENST00000493455 OPN1MW2P0DN77 364 aa12.49□□□□□ -0.41
HPS4-216ENST00000493455 OPN1MW3P0DN78 364 aa12.49□□□□□ -0.41
HPS4-216ENST00000493455 MYOD1P15172 320 aa12.49□□□□□ -0.41
HPS4-216ENST00000493455 RAG2P55895 527 aa12.49□□□□□ -0.41
HPS4-216ENST00000493455 OR2B8PP59922 312 aa12.49□□□□□ -0.41
HPS4-216ENST00000493455 SRPXP78539 464 aa12.49□□□□□ -0.41
HPS4-216ENST00000493455 RELBQ01201 579 aa12.49□□□□□ -0.41
HPS4-216ENST00000493455 SLC35E3Q7Z769 313 aa12.49□□□□□ -0.41
HPS4-216ENST00000493455 PUSL1Q8N0Z8 303 aaKnown RBP12.49□□□□□ -0.41
HPS4-216ENST00000493455 GRPEL2Q8TAA5 225 aa12.49□□□□□ -0.41
HPS4-216ENST00000493455 RRNAD1Q96FB5 475 aaKnown RBP12.49□□□□□ -0.41
HPS4-216ENST00000493455 SEC22AQ96IW7 307 aa12.49□□□□□ -0.41
HPS4-216ENST00000493455 ZNF430Q9H8G1 570 aaPredicted RBP12.49□□□□□ -0.41
HPS4-216ENST00000493455 ZNF702PQ9H963 129 aa12.49□□□□□ -0.41
HPS4-216ENST00000493455 PARP11Q9NR21 331 aa12.49□□□□□ -0.41
HPS4-216ENST00000493455 SETD2Q9BYW2 2564 aaPredicted RBP12.49□□□□□ -0.41
HPS4-216ENST00000493455 LINC01548A6NM66 108 aa12.48□□□□□ -0.41
HPS4-216ENST00000493455 SNAPC5O75971 98 aa12.48□□□□□ -0.41
HPS4-216ENST00000493455 ACTL6BO94805 426 aa12.48□□□□□ -0.41
HPS4-216ENST00000493455 CDS2O95674 445 aa12.48□□□□□ -0.41
HPS4-216ENST00000493455 DHFRP00374 187 aa12.48□□□□□ -0.41
HPS4-216ENST00000493455 CRYGBP07316 175 aa12.48□□□□□ -0.41
HPS4-216ENST00000493455 HOXB5P09067 269 aa12.48□□□□□ -0.41
HPS4-216ENST00000493455 VDAC2P45880 294 aaPredicted RBP12.48□□□□□ -0.41
HPS4-216ENST00000493455 LYZL2Q7Z4W2 148 aa12.48□□□□□ -0.41
HPS4-216ENST00000493455 OR2T6Q8NHC8 308 aa12.48□□□□□ -0.41
HPS4-216ENST00000493455 COQ8AQ8NI60 647 aa12.48□□□□□ -0.41
HPS4-216ENST00000493455 TMEM167AQ8TBQ9 72 aa12.48□□□□□ -0.41
HPS4-216ENST00000493455 PHB2Q99623 299 aa12.48□□□□□ -0.41
HPS4-216ENST00000493455 FAM103A1Q9BTL3 118 aaKnown RBP12.48□□□□□ -0.41
HPS4-216ENST00000493455 TET2Q6N021 2002 aaPredicted RBP12.48□□□□□ -0.41
HPS4-216ENST00000493455 IGHV7-81A0A0B4J1V7 117 aa12.47□□□□□ -0.41
HPS4-216ENST00000493455 A0A0G2JRQ6 117 aa12.47□□□□□ -0.41
HPS4-216ENST00000493455 UPK2O00526 184 aa12.47□□□□□ -0.41
HPS4-216ENST00000493455 NXPH3O95157 252 aa12.47□□□□□ -0.41
HPS4-216ENST00000493455 HLA-DRB1P01911 266 aa12.47□□□□□ -0.41
HPS4-216ENST00000493455 APELAP0DMC3 54 aa12.47□□□□□ -0.41
HPS4-216ENST00000493455 RPL15P61313 204 aaKnown RBP12.47□□□□□ -0.41
HPS4-216ENST00000493455 CX3CL1P78423 397 aa12.47□□□□□ -0.41
HPS4-216ENST00000493455 FXYD3Q14802 87 aa12.47□□□□□ -0.41
HPS4-216ENST00000493455 PRSS8Q16651 343 aa12.47□□□□□ -0.41
HPS4-216ENST00000493455 ECSCRQ19T08 205 aa12.47□□□□□ -0.41
HPS4-216ENST00000493455 KRTAP24-1Q3LI83 254 aa12.47□□□□□ -0.41
HPS4-216ENST00000493455 C10orf55Q5SWW7 151 aa12.47□□□□□ -0.41
HPS4-216ENST00000493455 MMD2Q8IY49 270 aa12.47□□□□□ -0.41
HPS4-216ENST00000493455 OR4A16Q8NH70 328 aa12.47□□□□□ -0.41
HPS4-216ENST00000493455 ZNF431Q8TF32 576 aaPredicted RBP12.47□□□□□ -0.41
HPS4-216ENST00000493455 TMEM56Q96MV1 263 aa12.47□□□□□ -0.41
HPS4-216ENST00000493455 MARVELD1Q9BSK0 173 aa12.47□□□□□ -0.41
HPS4-216ENST00000493455 HINT2Q9BX68 163 aa12.47□□□□□ -0.41
HPS4-216ENST00000493455 ALX4Q9H161 411 aaPredicted RBP12.47□□□□□ -0.41
HPS4-216ENST00000493455 GPN1Q9HCN4 374 aaPredicted RBP12.47□□□□□ -0.41
HPS4-216ENST00000493455 BET1LQ9NYM9 111 aa12.47□□□□□ -0.41
HPS4-216ENST00000493455 TMEM56-RWDD3S4R434 201 aa12.47□□□□□ -0.41
HPS4-216ENST00000493455 HAX1O00165 279 aa12.46□□□□□ -0.41
HPS4-216ENST00000493455 ATP6V0E1O15342 81 aa12.46□□□□□ -0.41
HPS4-216ENST00000493455 CREBL2O60519 120 aaPredicted RBP12.46□□□□□ -0.41
HPS4-216ENST00000493455 DUS4LO95620 317 aaKnown RBP12.46□□□□□ -0.41
HPS4-216ENST00000493455 MDKP21741 143 aaPredicted RBP12.46□□□□□ -0.41
HPS4-216ENST00000493455 RPL8P62917 257 aaKnown RBP12.46□□□□□ -0.41
HPS4-216ENST00000493455 NDPQ00604 133 aa12.46□□□□□ -0.41
HPS4-216ENST00000493455 POU2AF1Q16633 256 aa12.46□□□□□ -0.41
HPS4-216ENST00000493455 OR4A5Q8NH83 315 aa12.46□□□□□ -0.41
HPS4-216ENST00000493455 ZFAND2BQ8WV99 257 aa12.46□□□□□ -0.41
HPS4-216ENST00000493455 ARPC1AQ92747 370 aa12.46□□□□□ -0.41
HPS4-216ENST00000493455 IL22RA2Q969J5 263 aa12.46□□□□□ -0.41
HPS4-216ENST00000493455 NOL4LQ96MY1 436 aaPredicted RBP12.46□□□□□ -0.41
HPS4-216ENST00000493455 FYTTD1Q96QD9 318 aaKnown RBP12.46□□□□□ -0.41
HPS4-216ENST00000493455 OR51J1Q9H342 316 aa12.46□□□□□ -0.41
HPS4-216ENST00000493455 MMP24Q9Y5R2 645 aa12.46□□□□□ -0.41
HPS4-216ENST00000493455 TNCP24821 2201 aa12.45□□□□□ -0.42
HPS4-216ENST00000493455 A0A0B4J2A0 478 aa12.45□□□□□ -0.42
HPS4-216ENST00000493455 CCSO14618 274 aa12.45□□□□□ -0.42
HPS4-216ENST00000493455 KCNAB3O43448 404 aa12.45□□□□□ -0.42
HPS4-216ENST00000493455 PRAF2O60831 178 aa12.45□□□□□ -0.42
HPS4-216ENST00000493455 ADAP1O75689 374 aa12.45□□□□□ -0.42
HPS4-216ENST00000493455 HLA-GP17693 338 aa12.45□□□□□ -0.42
HPS4-216ENST00000493455 MECP2P51608 486 aaKnown RBP12.45□□□□□ -0.42
HPS4-216ENST00000493455 MRGPRG-AS1Q2M3A8 158 aa12.45□□□□□ -0.42
HPS4-216ENST00000493455 FOXRED2Q8IWF2 684 aa12.45□□□□□ -0.42
HPS4-216ENST00000493455 C12orf45Q8N5I9 185 aaPredicted RBP12.45□□□□□ -0.42
HPS4-216ENST00000493455 OR4F5Q8NH21 305 aa12.45□□□□□ -0.42
HPS4-216ENST00000493455 GPR146Q96CH1 333 aa12.45□□□□□ -0.42
HPS4-216ENST00000493455 COMMD5Q9GZQ3 224 aa12.45□□□□□ -0.42
HPS4-216ENST00000493455 CACNG5Q9UF02 275 aa12.45□□□□□ -0.42
HPS4-216ENST00000493455 SHPKQ9UHJ6 478 aa12.45□□□□□ -0.42
HPS4-216ENST00000493455 OR51B2Q9Y5P1 312 aa12.45□□□□□ -0.42
HPS4-216ENST00000493455 WSB1Q9Y6I7 421 aa12.45□□□□□ -0.42
HPS4-216ENST00000493455 FAM25EA8MYX2 175 aa12.44□□□□□ -0.42
HPS4-216ENST00000493455 TSPAN9O75954 239 aa12.44□□□□□ -0.42
HPS4-216ENST00000493455 NDUFA7O95182 113 aa12.44□□□□□ -0.42
HPS4-216ENST00000493455 IGHG2P01859 326 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms