RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 IZUMO4Q1ZYL8 232 aa13.65□□□□□ -0.22
LIME1-208ENST00000493265 H2BFWTQ7Z2G1 175 aa13.65□□□□□ -0.22
LIME1-208ENST00000493265 FAM71E2Q8N5Q1 922 aa13.65□□□□□ -0.22
LIME1-208ENST00000493265 ZFAND2BQ8WV99 257 aa13.65□□□□□ -0.22
LIME1-208ENST00000493265 RBPMSQ93062 196 aaKnown RBP13.65□□□□□ -0.22
LIME1-208ENST00000493265 AIFM2Q9BRQ8 373 aa13.65□□□□□ -0.22
LIME1-208ENST00000493265 NPFFR1Q9GZQ6 430 aa13.65□□□□□ -0.22
LIME1-208ENST00000493265 ALX4Q9H161 411 aaPredicted RBP13.65□□□□□ -0.22
LIME1-208ENST00000493265 RANBP3Q9H6Z4 567 aaPredicted RBP13.65□□□□□ -0.22
LIME1-208ENST00000493265 SIGLEC9Q9Y336 463 aa13.65□□□□□ -0.22
LIME1-208ENST00000493265 TRAV3A0A0B4J244 114 aa13.64□□□□□ -0.23
LIME1-208ENST00000493265 OR2A4O95047 310 aa13.64□□□□□ -0.23
LIME1-208ENST00000493265 IGKV1-5P01602 117 aa13.64□□□□□ -0.23
LIME1-208ENST00000493265 MECP2P51608 486 aaKnown RBP13.64□□□□□ -0.23
LIME1-208ENST00000493265 SRPXP78539 464 aa13.64□□□□□ -0.23
LIME1-208ENST00000493265 Q6ZS46 218 aa13.64□□□□□ -0.23
LIME1-208ENST00000493265 LYZL2Q7Z4W2 148 aa13.64□□□□□ -0.23
LIME1-208ENST00000493265 SLC35G3Q8N808 338 aa13.64□□□□□ -0.23
LIME1-208ENST00000493265 TEX45Q8NA69 505 aa13.64□□□□□ -0.23
LIME1-208ENST00000493265 COQ8AQ8NI60 647 aa13.64□□□□□ -0.23
LIME1-208ENST00000493265 ZNF431Q8TF32 576 aaPredicted RBP13.64□□□□□ -0.23
LIME1-208ENST00000493265 RRNAD1Q96FB5 475 aaKnown RBP13.64□□□□□ -0.23
LIME1-208ENST00000493265 SEC22AQ96IW7 307 aa13.64□□□□□ -0.23
LIME1-208ENST00000493265 TMEM56Q96MV1 263 aa13.64□□□□□ -0.23
LIME1-208ENST00000493265 OR2A7Q96R45 310 aa13.64□□□□□ -0.23
LIME1-208ENST00000493265 NSG2Q9Y328 171 aa13.64□□□□□ -0.23
LIME1-208ENST00000493265 TMEM56-RWDD3S4R434 201 aa13.64□□□□□ -0.23
LIME1-208ENST00000493265 ATG12O94817 140 aa13.63□□□□□ -0.23
LIME1-208ENST00000493265 KBTBD11O94819 623 aa13.63□□□□□ -0.23
LIME1-208ENST00000493265 DUS4LO95620 317 aaKnown RBP13.63□□□□□ -0.23
LIME1-208ENST00000493265 CA2P00918 260 aa13.63□□□□□ -0.23
LIME1-208ENST00000493265 IL5P05113 134 aa13.63□□□□□ -0.23
LIME1-208ENST00000493265 CRYGBP07316 175 aa13.63□□□□□ -0.23
LIME1-208ENST00000493265 HOXB5P09067 269 aa13.63□□□□□ -0.23
LIME1-208ENST00000493265 OXA1LQ15070 435 aa13.63□□□□□ -0.23
LIME1-208ENST00000493265 PPP1R27Q86WC6 154 aa13.63□□□□□ -0.23
LIME1-208ENST00000493265 PUSL1Q8N0Z8 303 aaKnown RBP13.63□□□□□ -0.23
LIME1-208ENST00000493265 VSTM2AQ8TAG5 236 aa13.63□□□□□ -0.23
LIME1-208ENST00000493265 ABHD5Q8WTS1 349 aa13.63□□□□□ -0.23
LIME1-208ENST00000493265 HSPB9Q9BQS6 159 aa13.63□□□□□ -0.23
LIME1-208ENST00000493265 PRSS22Q9GZN4 317 aa13.63□□□□□ -0.23
LIME1-208ENST00000493265 ZNF430Q9H8G1 570 aaPredicted RBP13.63□□□□□ -0.23
LIME1-208ENST00000493265 GPN1Q9HCN4 374 aaPredicted RBP13.63□□□□□ -0.23
LIME1-208ENST00000493265 A0A0G2JRQ6 117 aa13.62□□□□□ -0.23
LIME1-208ENST00000493265 RBMXL2O75526 392 aaKnown RBP13.62□□□□□ -0.23
LIME1-208ENST00000493265 CNIH1O95406 144 aa13.62□□□□□ -0.23
LIME1-208ENST00000493265 OR9G9P0C7N8 305 aa13.62□□□□□ -0.23
LIME1-208ENST00000493265 RAG2P55895 527 aa13.62□□□□□ -0.23
LIME1-208ENST00000493265 OR2B8PP59922 312 aa13.62□□□□□ -0.23
LIME1-208ENST00000493265 TNXAQ16473 311 aa13.62□□□□□ -0.23
LIME1-208ENST00000493265 POU2AF1Q16633 256 aa13.62□□□□□ -0.23
LIME1-208ENST00000493265 PRSS8Q16651 343 aa13.62□□□□□ -0.23
LIME1-208ENST00000493265 PHB2Q99623 299 aa13.62□□□□□ -0.23
LIME1-208ENST00000493265 LINC01548A6NM66 108 aa13.61□□□□□ -0.23
LIME1-208ENST00000493265 UPK2O00526 184 aa13.61□□□□□ -0.23
LIME1-208ENST00000493265 CREBL2O60519 120 aaPredicted RBP13.61□□□□□ -0.23
LIME1-208ENST00000493265 PRAF2O60831 178 aa13.61□□□□□ -0.23
LIME1-208ENST00000493265 ADAP1O75689 374 aa13.61□□□□□ -0.23
LIME1-208ENST00000493265 SNAPC5O75971 98 aa13.61□□□□□ -0.23
LIME1-208ENST00000493265 ACTL6BO94805 426 aa13.61□□□□□ -0.23
LIME1-208ENST00000493265 OPN1MWP04001 364 aa13.61□□□□□ -0.23
LIME1-208ENST00000493265 OPN1MW2P0DN77 364 aa13.61□□□□□ -0.23
LIME1-208ENST00000493265 OPN1MW3P0DN78 364 aa13.61□□□□□ -0.23
LIME1-208ENST00000493265 MYOD1P15172 320 aa13.61□□□□□ -0.23
LIME1-208ENST00000493265 TATDN3Q17R31 274 aa13.61□□□□□ -0.23
LIME1-208ENST00000493265 TMEM95Q3KNT9 176 aa13.61□□□□□ -0.23
LIME1-208ENST00000493265 Q6ZSV7 163 aa13.61□□□□□ -0.23
LIME1-208ENST00000493265 C12orf45Q8N5I9 185 aaPredicted RBP13.61□□□□□ -0.23
LIME1-208ENST00000493265 GRPEL2Q8TAA5 225 aa13.61□□□□□ -0.23
LIME1-208ENST00000493265 TMEM167AQ8TBQ9 72 aa13.61□□□□□ -0.23
LIME1-208ENST00000493265 CHPT1Q8WUD6 406 aa13.61□□□□□ -0.23
LIME1-208ENST00000493265 MITD1Q8WV92 249 aa13.61□□□□□ -0.23
LIME1-208ENST00000493265 IL22RA2Q969J5 263 aa13.61□□□□□ -0.23
LIME1-208ENST00000493265 GPR146Q96CH1 333 aa13.61□□□□□ -0.23
LIME1-208ENST00000493265 ZNF702PQ9H963 129 aa13.61□□□□□ -0.23
LIME1-208ENST00000493265 PARP11Q9NR21 331 aa13.61□□□□□ -0.23
LIME1-208ENST00000493265 BET1LQ9NYM9 111 aa13.61□□□□□ -0.23
LIME1-208ENST00000493265 MMP24Q9Y5R2 645 aa13.61□□□□□ -0.23
LIME1-208ENST00000493265 A0A0B4J293 547 aa13.6□□□□□ -0.23
LIME1-208ENST00000493265 A0A0B4J2A0 478 aa13.6□□□□□ -0.23
LIME1-208ENST00000493265 HLA-DRB1P01911 266 aa13.6□□□□□ -0.23
LIME1-208ENST00000493265 RPL8P62917 257 aaKnown RBP13.6□□□□□ -0.23
LIME1-208ENST00000493265 CX3CL1P78423 397 aa13.6□□□□□ -0.23
LIME1-208ENST00000493265 RELBQ01201 579 aa13.6□□□□□ -0.23
LIME1-208ENST00000493265 MRGPRG-AS1Q2M3A8 158 aa13.6□□□□□ -0.23
LIME1-208ENST00000493265 C10orf55Q5SWW7 151 aa13.6□□□□□ -0.23
LIME1-208ENST00000493265 SLC35E3Q7Z769 313 aa13.6□□□□□ -0.23
LIME1-208ENST00000493265 MMD2Q8IY49 270 aa13.6□□□□□ -0.23
LIME1-208ENST00000493265 OR4A16Q8NH70 328 aa13.6□□□□□ -0.23
LIME1-208ENST00000493265 OR4A5Q8NH83 315 aa13.6□□□□□ -0.23
LIME1-208ENST00000493265 SHPKQ9UHJ6 478 aa13.6□□□□□ -0.23
LIME1-208ENST00000493265 LINC00527Q9UJ94 153 aa13.6□□□□□ -0.23
LIME1-208ENST00000493265 ALG5Q9Y673 324 aa13.6□□□□□ -0.23
LIME1-208ENST00000493265 IGHV7-81A0A0B4J1V7 117 aa13.59□□□□□ -0.23
LIME1-208ENST00000493265 CCSO14618 274 aa13.59□□□□□ -0.23
LIME1-208ENST00000493265 SSNA1O43805 119 aa13.59□□□□□ -0.23
LIME1-208ENST00000493265 NXPH3O95157 252 aa13.59□□□□□ -0.23
LIME1-208ENST00000493265 HLA-GP17693 338 aa13.59□□□□□ -0.23
LIME1-208ENST00000493265 FXYD3Q14802 87 aa13.59□□□□□ -0.23
LIME1-208ENST00000493265 GGNBP1Q5YKI7 109 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms