RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 RRNAD1Q96FB5 475 aaKnown RBP10.7□□□□□ -0.7
MSH6-208ENST00000493177 TMEM56Q96MV1 263 aa10.7□□□□□ -0.7
MSH6-208ENST00000493177 RNF5Q99942 180 aa10.7□□□□□ -0.7
MSH6-208ENST00000493177 SLC25A33Q9BSK2 321 aa10.7□□□□□ -0.7
MSH6-208ENST00000493177 OR51J1Q9H342 316 aa10.7□□□□□ -0.7
MSH6-208ENST00000493177 TMEM56-RWDD3S4R434 201 aa10.7□□□□□ -0.7
MSH6-208ENST00000493177 A0A0B4J293 547 aa10.69□□□□□ -0.7
MSH6-208ENST00000493177 A0A0B4J2A0 478 aa10.69□□□□□ -0.7
MSH6-208ENST00000493177 A6NDX4 124 aa10.69□□□□□ -0.7
MSH6-208ENST00000493177 MARCH11A6NNE9 402 aa10.69□□□□□ -0.7
MSH6-208ENST00000493177 SRRM4A7MD48 611 aaKnown RBP10.69□□□□□ -0.7
MSH6-208ENST00000493177 NBR2O15453 112 aa10.69□□□□□ -0.7
MSH6-208ENST00000493177 SLC25A17O43808 307 aa10.69□□□□□ -0.7
MSH6-208ENST00000493177 F2RL1P55085 397 aa10.69□□□□□ -0.7
MSH6-208ENST00000493177 PSG5Q15238 335 aa10.69□□□□□ -0.7
MSH6-208ENST00000493177 H2BFWTQ7Z2G1 175 aa10.69□□□□□ -0.7
MSH6-208ENST00000493177 LYZL2Q7Z4W2 148 aa10.69□□□□□ -0.7
MSH6-208ENST00000493177 Q8N6K4 173 aa10.69□□□□□ -0.7
MSH6-208ENST00000493177 SLC35G3Q8N808 338 aa10.69□□□□□ -0.7
MSH6-208ENST00000493177 RBM14Q96PK6 669 aaKnown RBP10.69□□□□□ -0.7
MSH6-208ENST00000493177 TMEM140Q9NV12 185 aa10.69□□□□□ -0.7
MSH6-208ENST00000493177 METTL1Q9UBP6 276 aaKnown RBP10.69□□□□□ -0.7
MSH6-208ENST00000493177 SHPKQ9UHJ6 478 aa10.69□□□□□ -0.7
MSH6-208ENST00000493177 C7orf66A4D0T2 115 aa10.68□□□□□ -0.7
MSH6-208ENST00000493177 M0QZ24 198 aa10.68□□□□□ -0.7
MSH6-208ENST00000493177 RRHO14718 337 aa10.68□□□□□ -0.7
MSH6-208ENST00000493177 OR2F2O95006 317 aa10.68□□□□□ -0.7
MSH6-208ENST00000493177 SPDEFO95238 335 aa10.68□□□□□ -0.7
MSH6-208ENST00000493177 IFNA21P01568 189 aa10.68□□□□□ -0.7
MSH6-208ENST00000493177 IGLV2-23P01705 113 aa10.68□□□□□ -0.7
MSH6-208ENST00000493177 SAA1P0DJI8 122 aaPredicted RBP10.68□□□□□ -0.7
MSH6-208ENST00000493177 UBE2KP61086 200 aa10.68□□□□□ -0.7
MSH6-208ENST00000493177 SRSF4Q08170 494 aaKnown RBP10.68□□□□□ -0.7
MSH6-208ENST00000493177 Q6ZNX1 250 aa10.68□□□□□ -0.7
MSH6-208ENST00000493177 LRTM2Q8N967 370 aa10.68□□□□□ -0.7
MSH6-208ENST00000493177 OR8H1Q8NGG4 311 aa10.68□□□□□ -0.7
MSH6-208ENST00000493177 VSTM2AQ8TAG5 236 aa10.68□□□□□ -0.7
MSH6-208ENST00000493177 SEC22AQ96IW7 307 aa10.68□□□□□ -0.7
MSH6-208ENST00000493177 RHOVQ96L33 236 aa10.68□□□□□ -0.7
MSH6-208ENST00000493177 CLCC1Q96S66 551 aa10.68□□□□□ -0.7
MSH6-208ENST00000493177 RASL11BQ9BPW5 248 aa10.68□□□□□ -0.7
MSH6-208ENST00000493177 FBXL15Q9H469 300 aa10.68□□□□□ -0.7
MSH6-208ENST00000493177 MOB4Q9Y3A3 225 aa10.68□□□□□ -0.7
MSH6-208ENST00000493177 ANK2Q01484 3957 aa10.68□□□□□ -0.7
MSH6-208ENST00000493177 hCG_2014768A0A024R1R8 64 aa10.67□□□□□ -0.7
MSH6-208ENST00000493177 DUXBA0A1W2PPF3 345 aa10.67□□□□□ -0.7
MSH6-208ENST00000493177 FAM25EA8MYX2 175 aa10.67□□□□□ -0.7
MSH6-208ENST00000493177 GOSR2O14653 212 aa10.67□□□□□ -0.7
MSH6-208ENST00000493177 RBMXL2O75526 392 aaKnown RBP10.67□□□□□ -0.7
MSH6-208ENST00000493177 ADAP1O75689 374 aa10.67□□□□□ -0.7
MSH6-208ENST00000493177 OR2A4O95047 310 aa10.67□□□□□ -0.7
MSH6-208ENST00000493177 IGKV1-5P01602 117 aa10.67□□□□□ -0.7
MSH6-208ENST00000493177 PRR31Q5SQ13 230 aa10.67□□□□□ -0.7
MSH6-208ENST00000493177 GGNBP1Q5YKI7 109 aa10.67□□□□□ -0.7
MSH6-208ENST00000493177 OR4A47Q6IF82 309 aa10.67□□□□□ -0.7
MSH6-208ENST00000493177 NPBQ8NG41 125 aa10.67□□□□□ -0.7
MSH6-208ENST00000493177 OR2T6Q8NHC8 308 aa10.67□□□□□ -0.7
MSH6-208ENST00000493177 OR2A7Q96R45 310 aa10.67□□□□□ -0.7
MSH6-208ENST00000493177 NPFFR1Q9GZQ6 430 aa10.67□□□□□ -0.7
MSH6-208ENST00000493177 MED28Q9H204 178 aa10.67□□□□□ -0.7
MSH6-208ENST00000493177 C16orf95Q9H693 158 aa10.67□□□□□ -0.7
MSH6-208ENST00000493177 RANBP3Q9H6Z4 567 aaPredicted RBP10.67□□□□□ -0.7
MSH6-208ENST00000493177 TET2Q6N021 2002 aaPredicted RBP10.67□□□□□ -0.7
MSH6-208ENST00000493177 C13orf42A0A1B0GVH6 325 aa10.66□□□□□ -0.7
MSH6-208ENST00000493177 C5orf51A6NDU8 294 aa10.66□□□□□ -0.7
MSH6-208ENST00000493177 CCSO14618 274 aa10.66□□□□□ -0.7
MSH6-208ENST00000493177 TSPAN9O75954 239 aa10.66□□□□□ -0.7
MSH6-208ENST00000493177 SNAPC5O75971 98 aa10.66□□□□□ -0.7
MSH6-208ENST00000493177 NDUFA3O95167 84 aa10.66□□□□□ -0.7
MSH6-208ENST00000493177 VDAC1P21796 283 aa10.66□□□□□ -0.7
MSH6-208ENST00000493177 GNB1P62873 340 aa10.66□□□□□ -0.7
MSH6-208ENST00000493177 POU2AF1Q16633 256 aa10.66□□□□□ -0.7
MSH6-208ENST00000493177 IZUMO4Q1ZYL8 232 aa10.66□□□□□ -0.7
MSH6-208ENST00000493177 C5orf64Q2M2E5 130 aa10.66□□□□□ -0.7
MSH6-208ENST00000493177 THOC7Q6I9Y2 204 aaKnown RBP10.66□□□□□ -0.7
MSH6-208ENST00000493177 TREML4Q6UXN2 200 aa10.66□□□□□ -0.7
MSH6-208ENST00000493177 C16orf82Q7Z2V1 217 aa10.66□□□□□ -0.7
MSH6-208ENST00000493177 FAM219AQ8IW50 185 aa10.66□□□□□ -0.7
MSH6-208ENST00000493177 PUSL1Q8N0Z8 303 aaKnown RBP10.66□□□□□ -0.7
MSH6-208ENST00000493177 TEX45Q8NA69 505 aa10.66□□□□□ -0.7
MSH6-208ENST00000493177 OR4A16Q8NH70 328 aa10.66□□□□□ -0.7
MSH6-208ENST00000493177 LSM10Q969L4 123 aaKnown RBP10.66□□□□□ -0.7
MSH6-208ENST00000493177 GPR146Q96CH1 333 aa10.66□□□□□ -0.7
MSH6-208ENST00000493177 TPSG1Q9NRR2 321 aa10.66□□□□□ -0.7
MSH6-208ENST00000493177 PLSCR3Q9NRY6 295 aa10.66□□□□□ -0.7
MSH6-208ENST00000493177 BET1LQ9NYM9 111 aa10.66□□□□□ -0.7
MSH6-208ENST00000493177 NSG2Q9Y328 171 aa10.66□□□□□ -0.7
MSH6-208ENST00000493177 TMED3Q9Y3Q3 217 aa10.66□□□□□ -0.7
MSH6-208ENST00000493177 TRAV3A0A0B4J244 114 aa10.65□□□□□ -0.7
MSH6-208ENST00000493177 A0A0G2JRQ6 117 aa10.65□□□□□ -0.7
MSH6-208ENST00000493177 M0QZK8 103 aa10.65□□□□□ -0.7
MSH6-208ENST00000493177 UPK2O00526 184 aa10.65□□□□□ -0.7
MSH6-208ENST00000493177 CHST1O43916 411 aa10.65□□□□□ -0.7
MSH6-208ENST00000493177 KBTBD11O94819 623 aa10.65□□□□□ -0.7
MSH6-208ENST00000493177 OR9G9P0C7N8 305 aa10.65□□□□□ -0.7
MSH6-208ENST00000493177 OR2B8PP59922 312 aa10.65□□□□□ -0.7
MSH6-208ENST00000493177 C9orf152Q5JTZ5 239 aa10.65□□□□□ -0.7
MSH6-208ENST00000493177 Q8N9W7 124 aa10.65□□□□□ -0.7
MSH6-208ENST00000493177 OR4A5Q8NH83 315 aa10.65□□□□□ -0.7
MSH6-208ENST00000493177 SPIN2AQ99865 258 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms