RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 TRIM63Q969Q1 353 aa10.95□□□□□ -0.66
CCM2-217ENST00000492883 R3HDM4Q96D70 268 aa10.95□□□□□ -0.66
CCM2-217ENST00000492883 COMMD9Q9P000 198 aa10.95□□□□□ -0.66
CCM2-217ENST00000492883 C14orf166Q9Y224 244 aaKnown RBP10.95□□□□□ -0.66
CCM2-217ENST00000492883 FOXA2Q9Y261 457 aaPredicted RBP10.95□□□□□ -0.66
CCM2-217ENST00000492883 MSGN1A6NI15 193 aa10.94□□□□□ -0.66
CCM2-217ENST00000492883 ADARB2-AS1A8MUL3 147 aa10.94□□□□□ -0.66
CCM2-217ENST00000492883 NUDT19A8MXV4 375 aa10.94□□□□□ -0.66
CCM2-217ENST00000492883 KBTBD11O94819 623 aa10.94□□□□□ -0.66
CCM2-217ENST00000492883 KRASP01116 189 aa10.94□□□□□ -0.66
CCM2-217ENST00000492883 RPLP1P05386 114 aaKnown RBP10.94□□□□□ -0.66
CCM2-217ENST00000492883 CTSDP07339 412 aaPredicted RBP10.94□□□□□ -0.66
CCM2-217ENST00000492883 PF4V1P10720 104 aa10.94□□□□□ -0.66
CCM2-217ENST00000492883 RPA2P15927 270 aa10.94□□□□□ -0.66
CCM2-217ENST00000492883 CRIP2P52943 208 aaPredicted RBP10.94□□□□□ -0.66
CCM2-217ENST00000492883 RND3P61587 244 aa10.94□□□□□ -0.66
CCM2-217ENST00000492883 RPL23AP62750 156 aaKnown RBP10.94□□□□□ -0.66
CCM2-217ENST00000492883 SSBP2P81877 361 aaPredicted RBP10.94□□□□□ -0.66
CCM2-217ENST00000492883 ZNF45Q02386 682 aa10.94□□□□□ -0.66
CCM2-217ENST00000492883 MRGPRG-AS1Q2M3A8 158 aa10.94□□□□□ -0.66
CCM2-217ENST00000492883 ZNF585BQ52M93 769 aa10.94□□□□□ -0.66
CCM2-217ENST00000492883 TRIQKQ629K1 86 aa10.94□□□□□ -0.66
CCM2-217ENST00000492883 OR4A47Q6IF82 309 aa10.94□□□□□ -0.66
CCM2-217ENST00000492883 TREML4Q6UXN2 200 aa10.94□□□□□ -0.66
CCM2-217ENST00000492883 LCNL1Q6ZST4 164 aa10.94□□□□□ -0.66
CCM2-217ENST00000492883 PUSL1Q8N0Z8 303 aaKnown RBP10.94□□□□□ -0.66
CCM2-217ENST00000492883 CCDC71LQ8N9Z2 235 aa10.94□□□□□ -0.66
CCM2-217ENST00000492883 MINDY2Q8NBR6 621 aa10.94□□□□□ -0.66
CCM2-217ENST00000492883 OR4F17Q8NGA8 305 aa10.94□□□□□ -0.66
CCM2-217ENST00000492883 OR4A5Q8NH83 315 aa10.94□□□□□ -0.66
CCM2-217ENST00000492883 TMEM167AQ8TBQ9 72 aa10.94□□□□□ -0.66
CCM2-217ENST00000492883 TMEM68Q96MH6 324 aa10.94□□□□□ -0.66
CCM2-217ENST00000492883 SCGB3A2Q96PL1 93 aa10.94□□□□□ -0.66
CCM2-217ENST00000492883 OR4F4Q96R69 305 aa10.94□□□□□ -0.66
CCM2-217ENST00000492883 BET1LQ9NYM9 111 aa10.94□□□□□ -0.66
CCM2-217ENST00000492883 SERPINE2P07093 398 aa10.93□□□□□ -0.66
CCM2-217ENST00000492883 PSMB8P28062 276 aa10.93□□□□□ -0.66
CCM2-217ENST00000492883 SURF2Q15527 256 aaPredicted RBP10.93□□□□□ -0.66
CCM2-217ENST00000492883 BAK1Q16611 211 aa10.93□□□□□ -0.66
CCM2-217ENST00000492883 POU2AF1Q16633 256 aa10.93□□□□□ -0.66
CCM2-217ENST00000492883 OR5T1Q8NG75 326 aa10.93□□□□□ -0.66
CCM2-217ENST00000492883 OR5M8Q8NGP6 311 aa10.93□□□□□ -0.66
CCM2-217ENST00000492883 SRSF12Q8WXF0 261 aaKnown RBP10.93□□□□□ -0.66
CCM2-217ENST00000492883 MRGPRFQ96AM1 343 aa10.93□□□□□ -0.66
CCM2-217ENST00000492883 ZNF355PQ9NSJ1 428 aa10.93□□□□□ -0.66
CCM2-217ENST00000492883 FAM212BQ9NTI7 297 aaPredicted RBP10.93□□□□□ -0.66
CCM2-217ENST00000492883 TMEM140Q9NV12 185 aa10.93□□□□□ -0.66
CCM2-217ENST00000492883 SLC2A8Q9NY64 477 aa10.93□□□□□ -0.66
CCM2-217ENST00000492883 GPR132Q9UNW8 380 aa10.93□□□□□ -0.66
CCM2-217ENST00000492883 TEX13DA0A0J9YY54 714 aaPredicted RBP10.92□□□□□ -0.66
CCM2-217ENST00000492883 C3orf85A0A1B0GTC6 90 aa10.92□□□□□ -0.66
CCM2-217ENST00000492883 MARCH11A6NNE9 402 aa10.92□□□□□ -0.66
CCM2-217ENST00000492883 UPK2O00526 184 aa10.92□□□□□ -0.66
CCM2-217ENST00000492883 IGLV1-40P01703 118 aa10.92□□□□□ -0.66
CCM2-217ENST00000492883 APELAP0DMC3 54 aa10.92□□□□□ -0.66
CCM2-217ENST00000492883 MAS1LP35410 378 aa10.92□□□□□ -0.66
CCM2-217ENST00000492883 G6PCP35575 357 aa10.92□□□□□ -0.66
CCM2-217ENST00000492883 RAB9AP51151 201 aa10.92□□□□□ -0.66
CCM2-217ENST00000492883 RPL8P62917 257 aaKnown RBP10.92□□□□□ -0.66
CCM2-217ENST00000492883 C19orf54Q5BKX5 351 aa10.92□□□□□ -0.66
CCM2-217ENST00000492883 ZNF695Q8IW36 515 aa10.92□□□□□ -0.66
CCM2-217ENST00000492883 RNF152Q8N8N0 203 aa10.92□□□□□ -0.66
CCM2-217ENST00000492883 DEDD2Q8WXF8 326 aa10.92□□□□□ -0.66
CCM2-217ENST00000492883 MS4A10Q96PG2 267 aa10.92□□□□□ -0.66
CCM2-217ENST00000492883 SPIN2AQ99865 258 aa10.92□□□□□ -0.66
CCM2-217ENST00000492883 SPIN2BQ9BPZ2 258 aa10.92□□□□□ -0.66
CCM2-217ENST00000492883 RTBDNQ9BSG5 229 aaPredicted RBP10.92□□□□□ -0.66
CCM2-217ENST00000492883 KLK15Q9H2R5 256 aa10.92□□□□□ -0.66
CCM2-217ENST00000492883 C5orf66Q9H5L9 145 aa10.92□□□□□ -0.66
CCM2-217ENST00000492883 TRAV3A0A0B4J244 114 aa10.91□□□□□ -0.66
CCM2-217ENST00000492883 LINC00854A0A1B0GVQ3 168 aa10.91□□□□□ -0.66
CCM2-217ENST00000492883 H0Y980 276 aa10.91□□□□□ -0.66
CCM2-217ENST00000492883 SOX15O60248 233 aa10.91□□□□□ -0.66
CCM2-217ENST00000492883 SNAPC5O75971 98 aa10.91□□□□□ -0.66
CCM2-217ENST00000492883 HLA-GP17693 338 aa10.91□□□□□ -0.66
CCM2-217ENST00000492883 RPL27AP46776 148 aaKnown RBP10.91□□□□□ -0.66
CCM2-217ENST00000492883 CDX1P47902 265 aaPredicted RBP10.91□□□□□ -0.66
CCM2-217ENST00000492883 SP6Q3SY56 376 aa10.91□□□□□ -0.66
CCM2-217ENST00000492883 C10orf55Q5SWW7 151 aa10.91□□□□□ -0.66
CCM2-217ENST00000492883 LINC00299Q6ZSB3 139 aa10.91□□□□□ -0.66
CCM2-217ENST00000492883 C18orf65Q6ZTR6 163 aa10.91□□□□□ -0.66
CCM2-217ENST00000492883 KLHL30-AS1Q8NEE0 82 aa10.91□□□□□ -0.66
CCM2-217ENST00000492883 CASTOR1Q8WTX7 329 aa10.91□□□□□ -0.66
CCM2-217ENST00000492883 FYTTD1Q96QD9 318 aaKnown RBP10.91□□□□□ -0.66
CCM2-217ENST00000492883 SDHCQ99643 169 aaPredicted RBP10.91□□□□□ -0.66
CCM2-217ENST00000492883 DNHD1Q96M86 4753 aa10.9□□□□□ -0.66
CCM2-217ENST00000492883 PF4P02776 101 aa10.9□□□□□ -0.66
CCM2-217ENST00000492883 IL6RP08887 468 aaPredicted RBP10.9□□□□□ -0.66
CCM2-217ENST00000492883 SLC6A1P30531 599 aa10.9□□□□□ -0.66
CCM2-217ENST00000492883 TRIM16LQ309B1 348 aa10.9□□□□□ -0.66
CCM2-217ENST00000492883 C8orf86Q6ZUL3 223 aa10.9□□□□□ -0.66
CCM2-217ENST00000492883 H2BFWTQ7Z2G1 175 aa10.9□□□□□ -0.66
CCM2-217ENST00000492883 TP53RKQ96S44 253 aa10.9□□□□□ -0.66
CCM2-217ENST00000492883 COMMD5Q9GZQ3 224 aa10.9□□□□□ -0.66
CCM2-217ENST00000492883 NAA60Q9H7X0 242 aa10.9□□□□□ -0.66
CCM2-217ENST00000492883 COA4Q9NYJ1 87 aa10.9□□□□□ -0.66
CCM2-217ENST00000492883 PTTG2Q9NZH5 202 aa10.9□□□□□ -0.66
CCM2-217ENST00000492883 VSIG4Q9Y279 399 aa10.9□□□□□ -0.66
CCM2-217ENST00000492883 HMX3A6NHT5 357 aa10.89□□□□□ -0.67
CCM2-217ENST00000492883 B3GALNT1O75752 331 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms